Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group1_versus_Group4.Basophil_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.30151317
Normalized Enrichment Score (NES)	-1.3587451
Nominal p-value	0.072434604
FDR q-value	0.35099828
FWER p-Value	0.719

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Itk	211	0.702	0.0088	No
2	Acvr2a	281	0.662	0.0241	No
3	Ccr1	313	0.648	0.0412	No
4	Lck	768	0.525	0.0315	No
5	Degs1	842	0.508	0.0422	No
6	Il7	878	0.503	0.0548	No
7	Traf2	1020	0.484	0.0611	No
8	F2r	1373	0.430	0.0542	No
9	Cd1d2	1688	0.400	0.0486	No
10	Gpr65	1746	0.396	0.0570	No
11	Pf4	1762	0.393	0.0675	No
12	Ccr2	2259	0.352	0.0505	No
13	Il27ra	2396	0.342	0.0530	No
14	C2	2574	0.327	0.0528	No
15	Jak2	2757	0.318	0.0520	No
16	Il15	2894	0.307	0.0534	No
17	Fas	2949	0.303	0.0592	No
18	Akt1	3010	0.299	0.0646	No
19	Flna	3020	0.299	0.0727	No
20	Ltb	3282	0.280	0.0665	No
21	Apbb1	3785	0.246	0.0462	No
22	H2-Ob	3885	0.241	0.0477	No
23	Il2rb	4354	0.216	0.0283	No
24	Map4k1	4431	0.213	0.0303	No
25	Hif1a	4690	0.198	0.0219	No
26	Tlr1	4830	0.190	0.0198	No
27	Tpd52	4944	0.183	0.0189	No
28	Was	5008	0.179	0.0206	No
29	Lcp2	5410	0.158	0.0032	No
30	Ly75	5643	0.149	-0.0052	No
31	Abce1	5809	0.141	-0.0101	No
32	Galnt1	5864	0.139	-0.0091	No
33	Hdac9	5919	0.136	-0.0081	No
34	Nlrp3	6033	0.131	-0.0105	No
35	Prkcb	6217	0.122	-0.0170	No
36	Ifngr1	6254	0.120	-0.0155	No
37	Ube2n	6281	0.118	-0.0135	No
38	Cd28	6360	0.115	-0.0144	No
39	Eif3a	6397	0.113	-0.0132	No
40	Tap2	6526	0.107	-0.0171	No
41	Icosl	6598	0.104	-0.0180	No
42	Irf4	6935	0.088	-0.0338	No
43	Hcls1	7335	0.071	-0.0536	No
44	Tapbp	7377	0.070	-0.0538	No
45	H2-DMb2	7593	0.060	-0.0639	No
46	Zap70	7891	0.047	-0.0788	No
47	Eif4g3	7924	0.046	-0.0792	No
48	Ache	8134	0.038	-0.0895	No
49	Cd247	8221	0.035	-0.0932	No
50	Igsf6	8526	0.023	-0.1092	No
51	Mtif2	8594	0.020	-0.1123	No
52	Ptpn6	8727	0.014	-0.1191	No
53	Spi1	9009	0.001	-0.1345	No
54	Crtam	9052	0.000	-0.1368	No
55	Glmn	9145	-0.000	-0.1418	No
56	Abi1	9313	-0.008	-0.1508	No
57	Wars1	9349	-0.009	-0.1524	No
58	St8sia4	9377	-0.010	-0.1536	No
59	Tap1	9458	-0.014	-0.1576	No
60	Il4ra	9491	-0.016	-0.1589	No
61	Socs5	9494	-0.016	-0.1585	No
62	Csf1	9565	-0.018	-0.1618	No
63	Il18rap	9568	-0.018	-0.1614	No
64	H2-DMa	9581	-0.019	-0.1615	No
65	Lyn	9662	-0.022	-0.1653	No
66	Capg	9768	-0.027	-0.1702	No
67	Irf8	9822	-0.029	-0.1723	No
68	Ccl5	10000	-0.036	-0.1810	No
69	Itgal	10018	-0.036	-0.1809	No
70	Ccnd2	10224	-0.046	-0.1908	No
71	Tlr2	10250	-0.046	-0.1908	No
72	Tgfb2	10334	-0.050	-0.1939	No
73	Npm1	10377	-0.053	-0.1947	No
74	Bcat1	10415	-0.054	-0.1951	No
75	Cd47	10419	-0.054	-0.1937	No
76	Il10	10489	-0.057	-0.1959	No
77	Mrpl3	10593	-0.062	-0.1997	No
78	Icam1	10695	-0.066	-0.2033	No
79	Ptprc	10739	-0.068	-0.2037	No
80	Map3k7	10802	-0.071	-0.2051	No
81	Cd80	11042	-0.081	-0.2158	No
82	Fasl	11103	-0.083	-0.2167	No
83	Il16	11599	-0.104	-0.2408	No
84	Ets1	11609	-0.104	-0.2383	No
85	Stat4	11662	-0.107	-0.2381	No
86	Thy1	11664	-0.107	-0.2350	No
87	Stat1	11952	-0.119	-0.2473	No
88	Ikbkb	12096	-0.126	-0.2515	No
89	Tlr6	12217	-0.130	-0.2543	No
90	Ccr5	12414	-0.141	-0.2609	No
91	Ube2d1	12883	-0.164	-0.2818	No
92	Csk	12913	-0.166	-0.2786	No
93	Tnf	13084	-0.174	-0.2829	No
94	Brca1	13162	-0.178	-0.2819	No
95	Ifngr2	13319	-0.186	-0.2851	No
96	Prkcg	13326	-0.186	-0.2800	No
97	Ccnd3	13614	-0.200	-0.2900	No
98	Egfr	13692	-0.205	-0.2883	No
99	Fgr	13935	-0.215	-0.2953	Yes
100	Il4	13974	-0.218	-0.2911	Yes
101	Cfp	14012	-0.219	-0.2868	Yes
102	Eif3j1	14091	-0.223	-0.2846	Yes
103	Cd79a	14238	-0.231	-0.2859	Yes
104	Cd86	14290	-0.234	-0.2819	Yes
105	Il2rg	14312	-0.236	-0.2763	Yes
106	Stab1	14320	-0.236	-0.2698	Yes
107	Klrd1	14363	-0.238	-0.2652	Yes
108	Elane	14377	-0.239	-0.2590	Yes
109	Ripk2	14479	-0.244	-0.2575	Yes
110	Gcnt1	14496	-0.245	-0.2513	Yes
111	Cd4	14628	-0.253	-0.2511	Yes
112	Il12a	14700	-0.256	-0.2476	Yes
113	Cd7	14847	-0.265	-0.2479	Yes
114	Irf7	14854	-0.266	-0.2406	Yes
115	Ifnar2	15019	-0.273	-0.2417	Yes
116	Rpl3l	15439	-0.305	-0.2558	Yes
117	Cdkn2a	15467	-0.306	-0.2484	Yes
118	Nck1	15515	-0.308	-0.2421	Yes
119	Cd96	15526	-0.310	-0.2337	Yes
120	Dyrk3	15634	-0.317	-0.2303	Yes
121	Srgn	15709	-0.324	-0.2250	Yes
122	Il11	15763	-0.327	-0.2185	Yes
123	Trat1	15764	-0.327	-0.2090	Yes
124	Fcgr2b	16068	-0.349	-0.2155	Yes
125	Ly86	16117	-0.353	-0.2079	Yes
126	Rps3a1	16197	-0.358	-0.2019	Yes
127	Bcl10	16229	-0.361	-0.1932	Yes
128	Elf4	16291	-0.368	-0.1859	Yes
129	Ctss	16347	-0.371	-0.1781	Yes
130	Rpl9	16377	-0.375	-0.1689	Yes
131	Tlr3	16534	-0.392	-0.1661	Yes
132	B2m	16823	-0.418	-0.1698	Yes
133	Tgfb1	16923	-0.431	-0.1627	Yes
134	H2-Oa	17093	-0.456	-0.1588	Yes
135	Nme1	17173	-0.464	-0.1497	Yes
136	Eif5a	17190	-0.466	-0.1371	Yes
137	Ncf4	17436	-0.504	-0.1359	Yes
138	Eif3d	17440	-0.505	-0.1215	Yes
139	Rps9	17457	-0.508	-0.1077	Yes
140	Cd74	17646	-0.544	-0.1022	Yes
141	Bcl3	17712	-0.558	-0.0897	Yes
142	Il18	17850	-0.588	-0.0802	Yes
143	Psmb10	17942	-0.614	-0.0674	Yes
144	Itgb2	17955	-0.617	-0.0502	Yes
145	H2-Aa	18201	-0.721	-0.0428	Yes
146	Il12rb1	18325	-0.845	-0.0251	Yes
147	Socs1	18386	-1.023	0.0012	Yes