DatasetCLP.Basophil_Pheno.cls
#Group1_versus_Group3.Basophil_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.31420013
Normalized Enrichment Score (NES)-1.1707634
Nominal p-value0.2936508
FDR q-value0.61164373
FWER p-Value0.935
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Fgl22060.6470.0060No
2Oasl12560.6260.0201No
3Stat37620.4870.0054No
4Il18bp11370.419-0.0039No
5Vcam112740.405-0.0005No
6Txnip13090.4000.0084No
7Ddx6014020.3900.0138No
8Ifih114210.3880.0232No
9Lcp216340.3670.0214No
10Lap317360.3560.0253No
11Trim2519660.3330.0217No
12Cmtr119740.3320.0302No
13Marchf121500.3190.0291No
14Cfb22780.3090.0305No
15Lysmd228260.2690.0077No
16Ncoa328600.2670.0130No
17Irf730670.2520.0085No
18Oas331980.2450.0079No
19Pim132510.2410.0115No
20Parp1436230.219-0.0030No
21Casp336340.2180.0023No
22Rnf21337550.2120.0014No
23Lats240810.195-0.0112No
24Jak247680.159-0.0446No
25Ifi3550470.146-0.0559No
26Helz251250.143-0.0563No
27Wars151410.143-0.0533No
28H2-DMa52330.138-0.0546No
29Il4ra53320.133-0.0564No
30Pla2g4a53820.132-0.0555No
31Pml54580.129-0.0562No
32Ogfr55800.123-0.0595No
33Samhd156100.122-0.0578No
34Btg156420.121-0.0563No
35Stat156540.120-0.0537No
36Ptpn258590.111-0.0619No
37Ifit258750.110-0.0598No
38Isg1559510.107-0.0610No
39Pnpt159670.107-0.0590No
40Rapgef660760.102-0.0621No
41Auts260890.102-0.0601No
42Sri64900.084-0.0798No
43Ifi2764940.084-0.0777No
44Gbp366640.078-0.0849No
45Myd8867050.076-0.0850No
46Zbp167110.076-0.0833No
47Isoc167870.073-0.0854No
48Ccl569830.066-0.0943No
49Ripk170150.065-0.0943No
50Casp770930.062-0.0969No
51Itgb773320.052-0.1085No
52Ptpn676050.041-0.1223No
53Il776130.040-0.1216No
54Eif4e376570.038-0.1230No
55St8sia477270.036-0.1258No
56Tap178000.033-0.1289No
57Eif2ak278550.031-0.1310No
58Mx279330.028-0.1345No
59Stat480020.025-0.1375No
60Stat280680.022-0.1405No
61Trim2181710.019-0.1455No
62Arl4a82430.017-0.1490No
63Cd27482920.015-0.1512No
64Hif1a85450.005-0.1649No
65Sp11085790.004-0.1666No
66Isg208756-0.002-0.1762No
67Rbck18865-0.007-0.1819No
68Ripk28932-0.010-0.1853No
69Irf89029-0.014-0.1902No
70Psmb89295-0.024-0.2041No
71Sod29324-0.025-0.2049No
72Bst29338-0.026-0.2050No
73Psme19543-0.033-0.2153No
74Herc69801-0.043-0.2282No
75Trafd19914-0.047-0.2331No
76Il10ra9939-0.048-0.2331No
77Il159969-0.050-0.2334No
78Vamp810197-0.059-0.2442No
79Rigi10336-0.064-0.2501No
80Socs310393-0.066-0.2514No
81Nup9310507-0.071-0.2557No
82Batf210538-0.072-0.2554No
83Irf110584-0.075-0.2558No
84Peli110641-0.077-0.2569No
85Casp410746-0.081-0.2604No
86Epsti110954-0.088-0.2694No
87Fas10986-0.090-0.2687No
88Ptpn111040-0.092-0.2691No
89Irf411152-0.097-0.2726No
90Irf511246-0.101-0.2750No
91Ifi4411264-0.102-0.2732No
92Nampt11389-0.107-0.2772No
93Cxcl1011576-0.114-0.2843No
94Psmb211629-0.116-0.2840No
95Pde4b11671-0.118-0.2831No
96Fcgr111690-0.119-0.2809No
97Cmpk211766-0.122-0.2818No
98Znfx111801-0.123-0.2803No
99Casp111838-0.125-0.2790No
100Xaf111981-0.131-0.2833No
101Plscr112113-0.137-0.2868No
102Arid5b12375-0.149-0.2971No
103Psme212395-0.150-0.2942No
104Parp1212428-0.152-0.2918No
105Selp12508-0.155-0.2920No
106Irf912537-0.157-0.2894No
107Slamf712688-0.165-0.2932No
108Adar12734-0.167-0.2912No
109Irf212760-0.168-0.2880No
110Ciita12864-0.173-0.2891No
111Bank113099-0.183-0.2970No
112Sppl2a13414-0.199-0.3089Yes
113Slc25a2813428-0.199-0.3042Yes
114Cd6913510-0.204-0.3032Yes
115Pfkp13617-0.210-0.3034Yes
116Dhx5813633-0.210-0.2986Yes
117Trim1413712-0.214-0.2971Yes
118Tnfsf1013848-0.222-0.2986Yes
119Pnp13944-0.228-0.2977Yes
120Ifit314053-0.233-0.2974Yes
121Rnf3114081-0.235-0.2926Yes
122Rsad214096-0.235-0.2871Yes
123Psma214189-0.239-0.2857Yes
124Nfkb114191-0.240-0.2793Yes
125Tnfaip214193-0.240-0.2730Yes
126Socs114341-0.249-0.2744Yes
127Bpgm14372-0.250-0.2694Yes
128Mthfd214538-0.260-0.2714Yes
129Cdkn1a14553-0.261-0.2652Yes
130Ifnar214730-0.270-0.2676Yes
131B2m14895-0.283-0.2691Yes
132Psmb914945-0.286-0.2641Yes
133Mvp14968-0.288-0.2576Yes
134Nlrc514979-0.288-0.2504Yes
135Icam115021-0.291-0.2449Yes
136Tapbp15482-0.321-0.2615Yes
137Casp815489-0.322-0.2532Yes
138Lgals3bp15639-0.332-0.2525Yes
139Tdrd715692-0.335-0.2464Yes
140Ly6e15851-0.348-0.2458Yes
141Gch115865-0.349-0.2371Yes
142Nmi16038-0.364-0.2368Yes
143Trim2616071-0.366-0.2288Yes
144Ifitm316076-0.367-0.2192Yes
145Oas216100-0.368-0.2106Yes
146Vamp516104-0.369-0.2009Yes
147Tor1b16252-0.381-0.1987Yes
148Rtp416271-0.383-0.1894Yes
149Cmklr116322-0.388-0.1818Yes
150Samd9l16423-0.397-0.1767Yes
151St3gal516675-0.422-0.1791Yes
152Psmb1016701-0.425-0.1691Yes
153Cd8616732-0.428-0.1593Yes
154Nod116880-0.443-0.1555Yes
155P2ry1417034-0.462-0.1516Yes
156Psma317209-0.482-0.1482Yes
157Ifi3017452-0.518-0.1476Yes
158H2-Aa17666-0.558-0.1443Yes
159Il15ra17735-0.574-0.1327Yes
160Gpr1817812-0.592-0.1210Yes
161Ifitm217924-0.626-0.1104Yes
162Usp1817952-0.634-0.0949Yes
163Ube2l618055-0.671-0.0825Yes
164Cd7418153-0.719-0.0686Yes
165Nfkbia18181-0.736-0.0504Yes
166Il2rb18212-0.759-0.0317Yes
167Tnfaip318239-0.781-0.0122Yes
168Cd3818255-0.8000.0084Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE