| Dataset | CLP.Basophil_Pheno.cls #Group1_versus_Group3.Basophil_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | Basophil_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.2356591 |
| Normalized Enrichment Score (NES) | -1.1542705 |
| Nominal p-value | 0.18939394 |
| FDR q-value | 0.52819544 |
| FWER p-Value | 0.949 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Sfn | 168 | 0.670 | 0.0109 | No |
| 2 | Prlr | 513 | 0.537 | 0.0081 | No |
| 3 | Pgr | 542 | 0.530 | 0.0225 | No |
| 4 | Fos | 652 | 0.507 | 0.0317 | No |
| 5 | Fkbp4 | 792 | 0.481 | 0.0385 | No |
| 6 | Farp1 | 965 | 0.446 | 0.0425 | No |
| 7 | Aldh3a2 | 1374 | 0.393 | 0.0319 | No |
| 8 | Slc16a1 | 1490 | 0.381 | 0.0371 | No |
| 9 | Slc27a2 | 2031 | 0.327 | 0.0173 | No |
| 10 | Mocs2 | 2038 | 0.327 | 0.0268 | No |
| 11 | Cav1 | 2232 | 0.313 | 0.0255 | No |
| 12 | Plxnb1 | 2380 | 0.300 | 0.0265 | No |
| 13 | Klf4 | 2381 | 0.300 | 0.0355 | No |
| 14 | Gfus | 2494 | 0.292 | 0.0381 | No |
| 15 | Dynlt3 | 2515 | 0.290 | 0.0457 | No |
| 16 | Bcl2 | 2817 | 0.270 | 0.0373 | No |
| 17 | Opn3 | 2861 | 0.267 | 0.0429 | No |
| 18 | Mapt | 2971 | 0.259 | 0.0447 | No |
| 19 | Hspa4l | 3004 | 0.256 | 0.0507 | No |
| 20 | Abhd2 | 3122 | 0.249 | 0.0517 | No |
| 21 | Ltf | 3166 | 0.246 | 0.0567 | No |
| 22 | Dusp2 | 3190 | 0.245 | 0.0628 | No |
| 23 | Prkar2b | 3194 | 0.245 | 0.0700 | No |
| 24 | Myof | 3265 | 0.241 | 0.0734 | No |
| 25 | Elovl5 | 3372 | 0.232 | 0.0745 | No |
| 26 | Wfs1 | 3478 | 0.227 | 0.0756 | No |
| 27 | Tspan13 | 3484 | 0.226 | 0.0821 | No |
| 28 | Fkbp5 | 3759 | 0.212 | 0.0734 | No |
| 29 | Pdcd4 | 3934 | 0.202 | 0.0700 | No |
| 30 | Gins2 | 4049 | 0.197 | 0.0696 | No |
| 31 | Snx10 | 4114 | 0.193 | 0.0719 | No |
| 32 | St6galnac2 | 4177 | 0.189 | 0.0742 | No |
| 33 | Chpt1 | 4192 | 0.188 | 0.0790 | No |
| 34 | Nrip1 | 4407 | 0.177 | 0.0726 | No |
| 35 | Hmgcs2 | 4733 | 0.160 | 0.0596 | No |
| 36 | Large1 | 4740 | 0.160 | 0.0641 | No |
| 37 | Jak2 | 4768 | 0.159 | 0.0674 | No |
| 38 | Jak1 | 4773 | 0.159 | 0.0719 | No |
| 39 | Sord | 4976 | 0.150 | 0.0653 | No |
| 40 | Frk | 4988 | 0.149 | 0.0692 | No |
| 41 | Tiam1 | 5114 | 0.144 | 0.0667 | No |
| 42 | Cdc6 | 5161 | 0.142 | 0.0684 | No |
| 43 | Tob1 | 5220 | 0.139 | 0.0694 | No |
| 44 | Llgl2 | 5291 | 0.135 | 0.0696 | No |
| 45 | Myb | 5324 | 0.134 | 0.0719 | No |
| 46 | Blvrb | 5367 | 0.132 | 0.0735 | No |
| 47 | Papss2 | 5393 | 0.132 | 0.0761 | No |
| 48 | Itpk1 | 5802 | 0.114 | 0.0572 | No |
| 49 | Gper1 | 5818 | 0.113 | 0.0597 | No |
| 50 | Tjp3 | 6316 | 0.091 | 0.0353 | No |
| 51 | Kcnk5 | 6348 | 0.090 | 0.0362 | No |
| 52 | St14 | 6495 | 0.084 | 0.0308 | No |
| 53 | Rnaseh2a | 6594 | 0.080 | 0.0278 | No |
| 54 | Cdh1 | 6628 | 0.079 | 0.0284 | No |
| 55 | Add3 | 6775 | 0.073 | 0.0226 | No |
| 56 | Mettl3 | 7095 | 0.062 | 0.0070 | No |
| 57 | Sgk1 | 7127 | 0.060 | 0.0071 | No |
| 58 | Amfr | 7281 | 0.054 | 0.0003 | No |
| 59 | Tmprss3 | 7425 | 0.048 | -0.0061 | No |
| 60 | Impa2 | 7557 | 0.043 | -0.0120 | No |
| 61 | Ptpn6 | 7605 | 0.041 | -0.0133 | No |
| 62 | Zfp36 | 7745 | 0.035 | -0.0199 | No |
| 63 | Dhcr7 | 7758 | 0.035 | -0.0195 | No |
| 64 | Ncor2 | 7760 | 0.035 | -0.0185 | No |
| 65 | Flnb | 7850 | 0.031 | -0.0225 | No |
| 66 | Sult2b1 | 7863 | 0.031 | -0.0222 | No |
| 67 | Slc22a5 | 8017 | 0.025 | -0.0298 | No |
| 68 | Slc29a1 | 8091 | 0.022 | -0.0332 | No |
| 69 | Btg3 | 8189 | 0.019 | -0.0379 | No |
| 70 | Siah2 | 8331 | 0.013 | -0.0453 | No |
| 71 | S100a9 | 8705 | 0.000 | -0.0657 | No |
| 72 | Isg20 | 8756 | -0.002 | -0.0684 | No |
| 73 | Stil | 8976 | -0.012 | -0.0800 | No |
| 74 | Ugdh | 9196 | -0.020 | -0.0914 | No |
| 75 | Aff1 | 9562 | -0.034 | -0.1104 | No |
| 76 | Slc1a4 | 9688 | -0.039 | -0.1160 | No |
| 77 | Slc24a3 | 9708 | -0.040 | -0.1159 | No |
| 78 | Bag1 | 9978 | -0.050 | -0.1291 | No |
| 79 | Ptger3 | 10024 | -0.051 | -0.1301 | No |
| 80 | Abca3 | 10402 | -0.067 | -0.1487 | No |
| 81 | Cox6c | 10426 | -0.067 | -0.1479 | No |
| 82 | Slc7a5 | 10657 | -0.077 | -0.1582 | No |
| 83 | Scarb1 | 10675 | -0.078 | -0.1568 | No |
| 84 | Dcxr | 10771 | -0.082 | -0.1595 | No |
| 85 | Dnajc12 | 10814 | -0.084 | -0.1593 | No |
| 86 | Chst8 | 10919 | -0.087 | -0.1624 | No |
| 87 | Rabep1 | 11003 | -0.090 | -0.1642 | No |
| 88 | Scnn1a | 11055 | -0.093 | -0.1643 | No |
| 89 | Dnajc1 | 11332 | -0.105 | -0.1762 | No |
| 90 | Rbbp8 | 11538 | -0.113 | -0.1841 | No |
| 91 | Fabp5 | 11697 | -0.119 | -0.1892 | No |
| 92 | Slc26a2 | 11858 | -0.125 | -0.1942 | No |
| 93 | Cish | 11879 | -0.126 | -0.1915 | No |
| 94 | Xrcc3 | 12075 | -0.134 | -0.1981 | No |
| 95 | Cd44 | 12184 | -0.140 | -0.1999 | No |
| 96 | Top2a | 12233 | -0.143 | -0.1982 | No |
| 97 | Tnnc1 | 12274 | -0.144 | -0.1961 | No |
| 98 | Mest | 12510 | -0.156 | -0.2043 | No |
| 99 | Id2 | 12523 | -0.156 | -0.2003 | No |
| 100 | Gale | 12526 | -0.156 | -0.1957 | No |
| 101 | Unc13b | 12655 | -0.163 | -0.1978 | No |
| 102 | Celsr2 | 12733 | -0.167 | -0.1970 | No |
| 103 | Xbp1 | 12756 | -0.168 | -0.1932 | No |
| 104 | Ppif | 12773 | -0.169 | -0.1890 | No |
| 105 | Idh2 | 12908 | -0.175 | -0.1911 | No |
| 106 | Mapk13 | 13462 | -0.202 | -0.2153 | No |
| 107 | Olfm1 | 13531 | -0.205 | -0.2129 | No |
| 108 | Anxa9 | 13828 | -0.221 | -0.2225 | No |
| 109 | Ckb | 13972 | -0.230 | -0.2235 | No |
| 110 | Rps6ka2 | 14062 | -0.234 | -0.2213 | No |
| 111 | Rab31 | 14325 | -0.248 | -0.2282 | Yes |
| 112 | Tst | 14453 | -0.255 | -0.2276 | Yes |
| 113 | Arl3 | 14531 | -0.260 | -0.2240 | Yes |
| 114 | Mdk | 14580 | -0.262 | -0.2188 | Yes |
| 115 | Kif20a | 14815 | -0.277 | -0.2233 | Yes |
| 116 | Plk4 | 14982 | -0.289 | -0.2237 | Yes |
| 117 | Il6st | 14984 | -0.289 | -0.2151 | Yes |
| 118 | Car2 | 15062 | -0.293 | -0.2105 | Yes |
| 119 | Atp2b4 | 15170 | -0.299 | -0.2074 | Yes |
| 120 | Il17rb | 15440 | -0.318 | -0.2127 | Yes |
| 121 | Cacna2d2 | 15488 | -0.321 | -0.2056 | Yes |
| 122 | Ccnd1 | 15612 | -0.330 | -0.2024 | Yes |
| 123 | Plaat3 | 15616 | -0.330 | -0.1927 | Yes |
| 124 | Lsr | 15900 | -0.352 | -0.1977 | Yes |
| 125 | Rapgefl1 | 15924 | -0.354 | -0.1883 | Yes |
| 126 | Ptges | 16077 | -0.367 | -0.1857 | Yes |
| 127 | Car12 | 16079 | -0.367 | -0.1747 | Yes |
| 128 | Homer2 | 16181 | -0.374 | -0.1690 | Yes |
| 129 | Cdc20 | 16216 | -0.377 | -0.1596 | Yes |
| 130 | Slc2a8 | 16333 | -0.389 | -0.1543 | Yes |
| 131 | Aldh3b1 | 16439 | -0.399 | -0.1481 | Yes |
| 132 | Gjb3 | 16561 | -0.412 | -0.1424 | Yes |
| 133 | Batf | 17049 | -0.464 | -0.1551 | Yes |
| 134 | Nxt1 | 17085 | -0.468 | -0.1430 | Yes |
| 135 | Tpd52l1 | 17165 | -0.477 | -0.1331 | Yes |
| 136 | Dhrs2 | 17507 | -0.528 | -0.1359 | Yes |
| 137 | Pdzk1 | 17620 | -0.549 | -0.1256 | Yes |
| 138 | Etfb | 17856 | -0.606 | -0.1203 | Yes |
| 139 | Fdft1 | 17925 | -0.626 | -0.1052 | Yes |
| 140 | Nab2 | 18047 | -0.668 | -0.0918 | Yes |
| 141 | Gla | 18048 | -0.668 | -0.0718 | Yes |
| 142 | Cd9 | 18050 | -0.669 | -0.0518 | Yes |
| 143 | Igfbp4 | 18219 | -0.764 | -0.0381 | Yes |
| 144 | Ass1 | 18243 | -0.785 | -0.0158 | Yes |
| 145 | Pkp3 | 18285 | -0.828 | 0.0067 | Yes |

