Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group1_versus_Group3.Basophil_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.16810083
Normalized Enrichment Score (NES)	0.69977677
Nominal p-value	0.9680639
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Kcnip2	489	0.545	-0.0106	Yes
2	Notch4	537	0.531	0.0025	Yes
3	Hspa1a	607	0.516	0.0141	Yes
4	Pdgfb	725	0.493	0.0223	Yes
5	Lrp1	794	0.481	0.0328	Yes
6	L3mbtl4	823	0.476	0.0454	Yes
7	Src	1001	0.439	0.0487	Yes
8	Gmfb	1046	0.432	0.0592	Yes
9	Adam9	1210	0.412	0.0624	Yes
10	Dpp4	1211	0.412	0.0747	Yes
11	Itgam	1242	0.408	0.0851	Yes
12	Lcp2	1634	0.367	0.0746	Yes
13	Prdm4	1645	0.365	0.0848	Yes
14	Clu	1657	0.363	0.0950	Yes
15	Lap3	1736	0.356	0.1013	Yes
16	Pcsk9	1746	0.355	0.1113	Yes
17	Actn2	1862	0.343	0.1152	Yes
18	F5	1938	0.336	0.1211	Yes
19	Lyn	1987	0.330	0.1282	Yes
20	F8	2037	0.327	0.1352	Yes
21	Prep	2090	0.323	0.1420	Yes
22	Cfb	2278	0.309	0.1409	Yes
23	Lipa	2449	0.296	0.1404	Yes
24	Usp8	2523	0.289	0.1449	Yes
25	Mmp8	2568	0.285	0.1510	Yes
26	Timp2	2719	0.277	0.1510	Yes
27	Spock2	2782	0.273	0.1556	Yes
28	Irf7	3067	0.252	0.1476	Yes
29	Plek	3071	0.252	0.1549	Yes
30	Ltf	3166	0.246	0.1570	Yes
31	Pim1	3251	0.241	0.1596	Yes
32	Phex	3409	0.230	0.1578	Yes
33	Gca	3580	0.221	0.1550	Yes
34	Casp3	3634	0.218	0.1586	Yes
35	Vcpip1	3713	0.215	0.1607	Yes
36	Lck	3719	0.214	0.1668	Yes
37	Olr1	3863	0.206	0.1651	Yes
38	Rbsn	4001	0.199	0.1634	Yes
39	Grb2	4024	0.198	0.1681	Yes
40	Dyrk2	4388	0.178	0.1535	No
41	Ctsb	4605	0.167	0.1466	No
42	Ctsd	4718	0.161	0.1453	No
43	Sirt6	4759	0.159	0.1478	No
44	Jak2	4768	0.159	0.1521	No
45	Psen1	4804	0.157	0.1548	No
46	Col4a2	4814	0.157	0.1590	No
47	Kynu	5137	0.143	0.1456	No
48	Pik3ca	5203	0.140	0.1461	No
49	Pla2g4a	5382	0.132	0.1403	No
50	Maff	5635	0.121	0.1301	No
51	Cd36	5655	0.120	0.1326	No
52	Serpinc1	5702	0.118	0.1336	No
53	Rnf4	5838	0.112	0.1295	No
54	Dock9	5871	0.110	0.1310	No
55	Cblb	6400	0.087	0.1047	No
56	Cr2	6465	0.085	0.1037	No
57	Raf1	6515	0.083	0.1035	No
58	Msrb1	6906	0.069	0.0841	No
59	Ccl5	6983	0.066	0.0820	No
60	Casp7	7093	0.062	0.0778	No
61	Cpq	7157	0.059	0.0761	No
62	Kif2a	7210	0.057	0.0750	No
63	Usp14	7313	0.053	0.0709	No
64	Dgkg	7371	0.050	0.0693	No
65	Plaur	7381	0.050	0.0703	No
66	Calm3	7469	0.046	0.0669	No
67	Usp16	7476	0.046	0.0679	No
68	Pclo	7520	0.044	0.0669	No
69	Zfpm2	7704	0.037	0.0579	No
70	Pik3cg	7705	0.037	0.0590	No
71	Anxa5	7749	0.035	0.0577	No
72	Gp1ba	7784	0.034	0.0569	No
73	Prcp	8235	0.017	0.0327	No
74	Xpnpep1	8366	0.011	0.0259	No
75	Gnai3	8409	0.010	0.0239	No
76	Sh2b3	8563	0.004	0.0157	No
77	S100a9	8705	0.000	0.0079	No
78	Gnai2	8949	-0.010	-0.0051	No
79	Pik3r5	9058	-0.015	-0.0105	No
80	Kcnip3	9434	-0.029	-0.0302	No
81	Cdk5r1	9569	-0.034	-0.0365	No
82	Gng2	9925	-0.048	-0.0546	No
83	Rabif	10206	-0.060	-0.0681	No
84	Gngt2	10237	-0.061	-0.0680	No
85	Pdp1	10421	-0.067	-0.0760	No
86	Stx4a	10555	-0.073	-0.0811	No
87	Irf1	10584	-0.075	-0.0804	No
88	Was	10668	-0.078	-0.0827	No
89	Dock10	10683	-0.079	-0.0811	No
90	Me1	10699	-0.079	-0.0796	No
91	Casp4	10746	-0.081	-0.0797	No
92	Zeb1	10749	-0.081	-0.0774	No
93	Dusp6	10988	-0.090	-0.0878	No
94	Usp15	10995	-0.090	-0.0854	No
95	Mmp14	11069	-0.093	-0.0867	No
96	Lgals3	11255	-0.101	-0.0938	No
97	Rce1	11277	-0.102	-0.0919	No
98	Prkcd	11336	-0.105	-0.0920	No
99	Ppp2cb	11411	-0.108	-0.0928	No
100	Cdh13	11787	-0.123	-0.1097	No
101	Casp1	11838	-0.125	-0.1088	No
102	Gpd2	12089	-0.135	-0.1184	No
103	Plscr1	12113	-0.137	-0.1157	No
104	Ctsl	12209	-0.141	-0.1167	No
105	Klkb1	12275	-0.144	-0.1160	No
106	Dusp5	12354	-0.148	-0.1158	No
107	Ang	12468	-0.153	-0.1175	No
108	Ctss	12517	-0.156	-0.1155	No
109	Ctsc	12667	-0.164	-0.1188	No
110	Irf2	12760	-0.168	-0.1189	No
111	Hspa5	12762	-0.168	-0.1139	No
112	Lta4h	12789	-0.170	-0.1103	No
113	Gata3	12888	-0.174	-0.1105	No
114	Cd46	13004	-0.178	-0.1115	No
115	Cp	13048	-0.181	-0.1085	No
116	Pfn1	13478	-0.203	-0.1260	No
117	Ctso	13717	-0.215	-0.1327	No
118	Prss36	13875	-0.223	-0.1347	No
119	F10	14026	-0.232	-0.1360	No
120	Fdx1	14133	-0.237	-0.1348	No
121	C2	14449	-0.254	-0.1445	No
122	Ctsh	14542	-0.260	-0.1418	No
123	Mmp15	14604	-0.263	-0.1374	No
124	Akap10	14628	-0.264	-0.1308	No
125	Fyn	14768	-0.273	-0.1303	No
126	S100a13	14793	-0.276	-0.1234	No
127	Casp9	14830	-0.279	-0.1171	No
128	Dock4	14836	-0.279	-0.1091	No
129	Psmb9	14945	-0.286	-0.1066	No
130	Car2	15062	-0.293	-0.1042	No
131	Dgkh	15159	-0.298	-0.1007	No
132	Gnb2	15521	-0.324	-0.1108	No
133	Ehd1	15655	-0.333	-0.1083	No
134	Brpf3	15726	-0.337	-0.1021	No
135	Lamp2	15848	-0.348	-0.0984	No
136	Gnb4	15980	-0.359	-0.0949	No
137	Calm1	16243	-0.380	-0.0980	No
138	Atox1	16294	-0.386	-0.0893	No
139	Csrp1	16384	-0.394	-0.0825	No
140	Lgmn	16404	-0.395	-0.0718	No
141	Rhog	16690	-0.424	-0.0749	No
142	Fn1	16953	-0.452	-0.0758	No
143	Cebpb	17053	-0.464	-0.0675	No
144	Hnf4a	17116	-0.472	-0.0569	No
145	Ppp4c	17333	-0.501	-0.0539	No
146	Cpm	17447	-0.517	-0.0447	No
147	Gp9	17472	-0.520	-0.0306	No
148	Fcer1g	17762	-0.578	-0.0293	No
149	C3	17910	-0.622	-0.0189	No
150	Rasgrp1	18230	-0.773	-0.0135	No
151	Tnfaip3	18239	-0.781	0.0093	No