Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.20890068
Normalized Enrichment Score (NES)	0.8586588
Nominal p-value	0.7610442
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Clu	226	0.715	0.0090	Yes
2	Mapk12	275	0.687	0.0269	Yes
3	Chrnb1	590	0.571	0.0267	Yes
4	Tnni1	836	0.522	0.0289	Yes
5	Itgb5	1019	0.489	0.0336	Yes
6	Actn2	1129	0.473	0.0417	Yes
7	Gsn	1168	0.468	0.0536	Yes
8	Slc6a8	1218	0.462	0.0647	Yes
9	Fxyd1	1241	0.460	0.0773	Yes
10	Pygm	1335	0.446	0.0855	Yes
11	Tpm2	1372	0.441	0.0967	Yes
12	Pde4dip	1373	0.441	0.1099	Yes
13	Dapk2	1428	0.434	0.1199	Yes
14	Mylpf	1442	0.433	0.1321	Yes
15	Kcnh1	1663	0.409	0.1323	Yes
16	Sirt2	1676	0.408	0.1438	Yes
17	Mybpc3	2056	0.376	0.1343	Yes
18	Col15a1	2139	0.369	0.1408	Yes
19	Prnp	2202	0.364	0.1483	Yes
20	Mapre3	2352	0.350	0.1506	Yes
21	Lpin1	2481	0.341	0.1538	Yes
22	Crat	2517	0.338	0.1619	Yes
23	Bin1	2802	0.317	0.1559	Yes
24	Kcnh2	2958	0.307	0.1566	Yes
25	Myh11	3025	0.301	0.1620	Yes
26	Tsc2	3039	0.301	0.1702	Yes
27	Sparc	3157	0.294	0.1726	Yes
28	Pcx	3177	0.292	0.1803	Yes
29	Adcy9	3185	0.292	0.1886	Yes
30	Akt2	3189	0.292	0.1972	Yes
31	Agl	3237	0.289	0.2032	Yes
32	Atp6ap1	3510	0.272	0.1965	Yes
33	Gaa	3644	0.262	0.1970	Yes
34	Atp2a1	3751	0.257	0.1989	Yes
35	Mef2d	4003	0.243	0.1924	Yes
36	Sphk1	4015	0.242	0.1990	Yes
37	Cnn3	4054	0.240	0.2041	Yes
38	Vipr1	4097	0.238	0.2089	Yes
39	Sptan1	4684	0.208	0.1830	No
40	Ocel1	5382	0.171	0.1500	No
41	Myom1	5393	0.171	0.1546	No
42	Ncam1	5415	0.169	0.1585	No
43	Sgcd	5437	0.169	0.1624	No
44	Mylk	5446	0.168	0.1669	No
45	App	5485	0.166	0.1698	No
46	Reep1	5818	0.150	0.1561	No
47	Sh2b1	6056	0.138	0.1473	No
48	Dmpk	6067	0.138	0.1509	No
49	Large1	6204	0.133	0.1474	No
50	Flii	6282	0.130	0.1471	No
51	Nos1	6549	0.118	0.1360	No
52	Ryr1	6787	0.107	0.1263	No
53	Nqo1	6818	0.106	0.1278	No
54	Eif4a2	6912	0.102	0.1258	No
55	Pick1	7159	0.093	0.1151	No
56	Speg	7361	0.084	0.1066	No
57	Nav2	7715	0.068	0.0893	No
58	Hbegf	7903	0.060	0.0808	No
59	Lama2	8002	0.056	0.0771	No
60	Ablim1	8451	0.039	0.0538	No
61	Myl4	8471	0.039	0.0539	No
62	Ppfia4	8584	0.034	0.0488	No
63	Tnnt3	8764	0.026	0.0398	No
64	Smtn	8825	0.023	0.0372	No
65	Col4a2	9066	0.014	0.0245	No
66	Psen2	9133	0.012	0.0212	No
67	Ptp4a3	9186	0.009	0.0187	No
68	Ifrd1	9197	0.009	0.0184	No
69	Col1a1	9432	0.000	0.0056	No
70	Rb1	9868	-0.016	-0.0177	No
71	Itgb1	10011	-0.022	-0.0249	No
72	Fgf2	10034	-0.023	-0.0254	No
73	Itgb4	10056	-0.024	-0.0258	No
74	Mef2c	10178	-0.029	-0.0316	No
75	Myh9	10212	-0.031	-0.0325	No
76	Pfkm	10283	-0.034	-0.0353	No
77	Myl6b	10348	-0.037	-0.0377	No
78	Svil	10489	-0.044	-0.0440	No
79	Notch1	10569	-0.047	-0.0470	No
80	Fkbp1b	10722	-0.054	-0.0537	No
81	Adam12	10874	-0.061	-0.0601	No
82	Sorbs3	10984	-0.066	-0.0641	No
83	Sorbs1	11343	-0.080	-0.0813	No
84	Lsp1	11444	-0.084	-0.0842	No
85	Rit1	11648	-0.093	-0.0926	No
86	Eno3	11824	-0.099	-0.0992	No
87	Myog	11828	-0.099	-0.0964	No
88	Mef2a	11906	-0.103	-0.0976	No
89	Csrp3	12047	-0.110	-0.1019	No
90	Acsl1	12141	-0.114	-0.1036	No
91	Mras	12315	-0.122	-0.1095	No
92	Igfbp7	12391	-0.125	-0.1098	No
93	Hdac5	12635	-0.137	-0.1190	No
94	Tnnt1	12667	-0.138	-0.1166	No
95	Tagln	12864	-0.147	-0.1229	No
96	Tnni2	13070	-0.157	-0.1295	No
97	Bhlhe40	13097	-0.158	-0.1262	No
98	Tpm3	13524	-0.180	-0.1441	No
99	Cdh13	13658	-0.187	-0.1458	No
100	Ak1	13684	-0.188	-0.1416	No
101	Tgfb1	13847	-0.197	-0.1446	No
102	Myo1c	14192	-0.214	-0.1570	No
103	Foxo4	14346	-0.224	-0.1587	No
104	Klf5	14668	-0.242	-0.1690	No
105	Tpd52l1	14797	-0.251	-0.1685	No
106	Ckb	15126	-0.270	-0.1784	No
107	Tead4	15302	-0.280	-0.1796	No
108	Gja5	15316	-0.281	-0.1720	No
109	Sh3bgr	15692	-0.307	-0.1833	No
110	Camk2b	15930	-0.324	-0.1866	No
111	Pdlim7	15962	-0.326	-0.1786	No
112	Cd36	15997	-0.329	-0.1706	No
113	Fhl1	16267	-0.350	-0.1749	No
114	Cox7a1	16335	-0.356	-0.1679	No
115	Bag1	16425	-0.363	-0.1620	No
116	Cdkn1a	16464	-0.366	-0.1531	No
117	Gabarapl2	16749	-0.394	-0.1569	No
118	Ache	17001	-0.420	-0.1581	No
119	Pkia	17147	-0.439	-0.1529	No
120	Agrn	17153	-0.440	-0.1400	No
121	Cryab	17337	-0.463	-0.1362	No
122	Erbb3	17356	-0.466	-0.1233	No
123	Cox6a2	17400	-0.472	-0.1116	No
124	Syngr2	17434	-0.478	-0.0991	No
125	Tnnc1	17466	-0.485	-0.0863	No
126	Dmd	17935	-0.576	-0.0947	No
127	Fdps	17971	-0.591	-0.0790	No
128	Plxnb2	17989	-0.599	-0.0620	No
129	Gadd45b	18184	-0.686	-0.0522	No
130	Kifc3	18230	-0.713	-0.0334	No
131	Schip1	18240	-0.718	-0.0124	No
132	Dtna	18248	-0.722	0.0088	No