Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.3366801
Normalized Enrichment Score (NES)	-1.4999406
Nominal p-value	0.0
FDR q-value	0.14063235
FWER p-Value	0.375

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Clu	226	0.715	0.0079	No
2	Timp3	333	0.659	0.0209	No
3	Gadd45a	559	0.578	0.0250	No
4	Txnip	563	0.576	0.0412	No
5	Krt18	589	0.571	0.0560	No
6	Lef1	621	0.565	0.0704	No
7	Btg2	829	0.524	0.0740	No
8	Mmp2	867	0.515	0.0866	No
9	Gpx4	925	0.507	0.0979	No
10	Bnip3l	979	0.497	0.1091	No
11	Gsn	1168	0.468	0.1121	No
12	Rhob	1791	0.398	0.0894	No
13	H1f0	2104	0.371	0.0828	No
14	Diablo	2196	0.364	0.0882	No
15	Plcb2	2346	0.351	0.0900	No
16	Ebp	2511	0.338	0.0907	No
17	Bmf	2605	0.330	0.0950	No
18	Eno2	3198	0.291	0.0708	No
19	Ank	3521	0.271	0.0609	No
20	Pak1	3583	0.267	0.0652	No
21	Tap1	3812	0.253	0.0599	No
22	Fdxr	3824	0.253	0.0665	No
23	Tnf	3927	0.246	0.0679	No
24	Smad7	4120	0.238	0.0641	No
25	Sptan1	4684	0.208	0.0392	No
26	Pdcd4	4815	0.200	0.0378	No
27	Psen1	4836	0.199	0.0423	No
28	Ppt1	4858	0.198	0.0468	No
29	Sod2	4956	0.193	0.0470	No
30	Btg3	5229	0.179	0.0372	No
31	Mgmt	5282	0.176	0.0394	No
32	Cd44	5421	0.169	0.0366	No
33	App	5485	0.166	0.0379	No
34	Igf2r	5606	0.160	0.0359	No
35	Jun	5712	0.155	0.0345	No
36	Wee1	5832	0.149	0.0323	No
37	Gch1	6318	0.128	0.0094	No
38	Rhot2	6618	0.115	-0.0037	No
39	Ccnd2	6620	0.115	-0.0005	No
40	Atf3	7041	0.097	-0.0207	No
41	Bik	7130	0.094	-0.0229	No
42	Rnasel	7199	0.090	-0.0240	No
43	Cth	7223	0.089	-0.0228	No
44	Crebbp	7341	0.084	-0.0268	No
45	Nedd9	7442	0.080	-0.0300	No
46	Dap3	7455	0.079	-0.0284	No
47	Casp7	7479	0.078	-0.0274	No
48	Isg20	7632	0.071	-0.0337	No
49	Cyld	7753	0.066	-0.0384	No
50	Casp3	7809	0.064	-0.0396	No
51	Cdc25b	7897	0.060	-0.0426	No
52	Ddit3	7898	0.060	-0.0409	No
53	Bid	7902	0.060	-0.0394	No
54	Cd69	7905	0.060	-0.0378	No
55	Vdac2	7921	0.059	-0.0369	No
56	Bcl2l11	8403	0.041	-0.0621	No
57	Hgf	8621	0.032	-0.0731	No
58	Ctnnb1	8654	0.031	-0.0739	No
59	Rock1	8833	0.023	-0.0830	No
60	Birc3	8890	0.021	-0.0855	No
61	Madd	8901	0.020	-0.0855	No
62	Dap	9028	0.016	-0.0919	No
63	Psen2	9133	0.012	-0.0973	No
64	Bcl2l1	9380	0.002	-0.1107	No
65	Sqstm1	9531	-0.003	-0.1188	No
66	Slc20a1	10115	-0.026	-0.1500	No
67	Dnm1l	10424	-0.041	-0.1657	No
68	Satb1	10500	-0.044	-0.1685	No
69	Gna15	10555	-0.047	-0.1701	No
70	Sc5d	10827	-0.059	-0.1833	No
71	Timp2	10932	-0.064	-0.1872	No
72	Ppp2r5b	11217	-0.075	-0.2006	No
73	Cflar	11272	-0.077	-0.2014	No
74	Ppp3r1	11313	-0.079	-0.2013	No
75	Dnaja1	11522	-0.088	-0.2102	No
76	Rara	11671	-0.094	-0.2156	No
77	Dnajc3	12151	-0.114	-0.2386	No
78	Aifm3	12205	-0.116	-0.2382	No
79	Cdk2	12212	-0.117	-0.2352	No
80	Bcl2l2	12347	-0.123	-0.2390	No
81	Fasl	12594	-0.134	-0.2487	No
82	Casp2	12766	-0.142	-0.2540	No
83	Cav1	12842	-0.146	-0.2539	No
84	Ccnd1	13049	-0.156	-0.2608	No
85	Ifngr1	13233	-0.165	-0.2661	No
86	Mcl1	13294	-0.168	-0.2646	No
87	Sod1	13368	-0.171	-0.2637	No
88	Emp1	13470	-0.176	-0.2642	No
89	Retsat	13642	-0.186	-0.2683	No
90	F2r	13716	-0.190	-0.2669	No
91	Pdgfrb	14191	-0.214	-0.2868	No
92	Bcl10	14328	-0.223	-0.2879	No
93	Etf1	14983	-0.262	-0.3162	No
94	Anxa1	15358	-0.282	-0.3287	Yes
95	Cdkn1b	15371	-0.283	-0.3213	Yes
96	Add1	15406	-0.286	-0.3150	Yes
97	Lmna	15457	-0.289	-0.3095	Yes
98	Lgals3	15661	-0.305	-0.3120	Yes
99	Nefh	15865	-0.319	-0.3140	Yes
100	Hmox1	15944	-0.325	-0.3090	Yes
101	Bax	15948	-0.325	-0.3000	Yes
102	Rela	16063	-0.332	-0.2968	Yes
103	Xiap	16096	-0.335	-0.2890	Yes
104	Tgfb2	16215	-0.346	-0.2856	Yes
105	Ptk2	16270	-0.350	-0.2786	Yes
106	Ier3	16279	-0.351	-0.2691	Yes
107	Casp8	16291	-0.352	-0.2597	Yes
108	Tnfrsf12a	16294	-0.353	-0.2498	Yes
109	Il18	16312	-0.354	-0.2406	Yes
110	Dffa	16391	-0.360	-0.2346	Yes
111	Sat1	16449	-0.365	-0.2274	Yes
112	Hmgb2	16459	-0.366	-0.2175	Yes
113	Cdkn1a	16464	-0.366	-0.2073	Yes
114	Top2a	16471	-0.367	-0.1972	Yes
115	Pmaip1	16509	-0.370	-0.1887	Yes
116	Gpx1	16511	-0.370	-0.1782	Yes
117	Dpyd	16686	-0.388	-0.1767	Yes
118	Casp1	16734	-0.392	-0.1681	Yes
119	Casp4	16854	-0.406	-0.1631	Yes
120	Brca1	16912	-0.412	-0.1545	Yes
121	Casp6	16937	-0.415	-0.1441	Yes
122	Ifitm3	17051	-0.426	-0.1381	Yes
123	Casp9	17161	-0.441	-0.1316	Yes
124	Tnfsf10	17179	-0.443	-0.1199	Yes
125	Irf1	17199	-0.445	-0.1083	Yes
126	Erbb3	17356	-0.466	-0.1036	Yes
127	Gsr	17724	-0.526	-0.1087	Yes
128	Tgfbr3	17913	-0.568	-0.1028	Yes
129	Pea15a	17977	-0.594	-0.0894	Yes
130	Bcap31	18093	-0.641	-0.0775	Yes
131	Gadd45b	18184	-0.686	-0.0629	Yes
132	Tspo	18284	-0.748	-0.0471	Yes
133	Cd38	18303	-0.763	-0.0264	Yes
134	Fas	18404	-1.129	0.0002	Yes