Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	CLP.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.33793572
Normalized Enrichment Score (NES)	-1.447211
Nominal p-value	0.046
FDR q-value	0.16342583
FWER p-Value	0.478

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ccr1	55	0.919	0.0221	No
2	Hdac9	177	0.753	0.0360	No
3	Tap2	600	0.569	0.0284	No
4	Cd28	1125	0.474	0.0126	No
5	H2-Ob	1264	0.457	0.0175	No
6	Cd247	1866	0.392	-0.0047	No
7	Zap70	2089	0.372	-0.0067	No
8	Nlrp3	2153	0.368	-0.0001	No
9	Ly75	2447	0.344	-0.0068	No
10	H2-DMa	2799	0.317	-0.0174	No
11	Ube2d1	3164	0.294	-0.0293	No
12	H2-DMb2	3235	0.289	-0.0253	No
13	Ltb	3543	0.270	-0.0347	No
14	Tap1	3812	0.253	-0.0425	No
15	Lck	3863	0.250	-0.0384	No
16	Tnf	3927	0.246	-0.0351	No
17	Cd80	4168	0.235	-0.0419	No
18	Flna	4745	0.204	-0.0679	No
19	Igsf6	4776	0.202	-0.0640	No
20	Jak2	4790	0.201	-0.0592	No
21	Degs1	4938	0.194	-0.0620	No
22	Glmn	4967	0.192	-0.0583	No
23	Ripk2	5086	0.186	-0.0597	No
24	Stat4	5209	0.180	-0.0615	No
25	Lyn	5480	0.166	-0.0717	No
26	Cfp	5660	0.157	-0.0772	No
27	Csk	5947	0.143	-0.0890	No
28	St8sia4	6027	0.139	-0.0895	No
29	Bcat1	6154	0.135	-0.0928	No
30	Prkcb	6215	0.132	-0.0924	No
31	Irf4	6223	0.132	-0.0892	No
32	Was	6325	0.128	-0.0913	No
33	Abce1	6410	0.124	-0.0925	No
34	Il15	6433	0.122	-0.0904	No
35	Il2rb	6452	0.122	-0.0880	No
36	Ccnd2	6620	0.115	-0.0940	No
37	Lcp2	6628	0.114	-0.0913	No
38	Itk	6655	0.113	-0.0896	No
39	Csf1	7038	0.097	-0.1079	No
40	Irf8	7072	0.096	-0.1071	No
41	Wars1	7213	0.089	-0.1123	No
42	Ccnd3	7310	0.086	-0.1152	No
43	Cd86	7335	0.085	-0.1143	No
44	Eif4g3	7595	0.073	-0.1264	No
45	Acvr2a	7746	0.067	-0.1328	No
46	Tlr3	7811	0.064	-0.1346	No
47	Map4k1	7814	0.064	-0.1330	No
48	C2	7975	0.057	-0.1402	No
49	Rps3a1	8050	0.054	-0.1427	No
50	Il7	8066	0.054	-0.1421	No
51	Stab1	8213	0.047	-0.1488	No
52	Elf4	8356	0.042	-0.1554	No
53	Hif1a	8373	0.042	-0.1552	No
54	Gpr65	8379	0.041	-0.1543	No
55	Ccr2	8446	0.040	-0.1568	No
56	Il16	8885	0.021	-0.1802	No
57	Ikbkb	8989	0.017	-0.1854	No
58	Cd47	9142	0.011	-0.1934	No
59	Traf2	9175	0.010	-0.1949	No
60	Spi1	9837	-0.014	-0.2307	No
61	Ptpn6	10235	-0.031	-0.2516	No
62	Eif3j1	10481	-0.043	-0.2638	No
63	Hcls1	10490	-0.044	-0.2631	No
64	Mrpl3	10764	-0.056	-0.2765	No
65	Npm1	10895	-0.062	-0.2819	No
66	Apbb1	11180	-0.073	-0.2955	No
67	Irf7	11222	-0.075	-0.2957	No
68	Cd79a	11237	-0.075	-0.2944	No
69	Capg	11325	-0.080	-0.2970	No
70	Srgn	11382	-0.082	-0.2978	No
71	Il10	11485	-0.086	-0.3011	No
72	Abi1	11520	-0.088	-0.3006	No
73	Il12a	11569	-0.089	-0.3007	No
74	Cd96	11675	-0.094	-0.3039	No
75	Map3k7	11790	-0.097	-0.3075	No
76	Icam1	11945	-0.104	-0.3131	No
77	Ifnar2	12233	-0.118	-0.3256	No
78	Elane	12304	-0.121	-0.3262	No
79	Rpl9	12308	-0.122	-0.3230	No
80	Rpl3l	12338	-0.123	-0.3213	No
81	Tlr6	12436	-0.127	-0.3231	No
82	H2-Oa	12524	-0.131	-0.3243	No
83	Socs5	12528	-0.131	-0.3209	No
84	Ets1	12567	-0.133	-0.3193	No
85	Ube2n	12586	-0.134	-0.3167	No
86	Fasl	12594	-0.134	-0.3134	No
87	Il27ra	12598	-0.134	-0.3099	No
88	Il18rap	12763	-0.142	-0.3150	No
89	Cd1d2	12952	-0.152	-0.3212	No
90	Crtam	13004	-0.154	-0.3198	No
91	Eif5a	13093	-0.158	-0.3203	No
92	Ncf4	13179	-0.162	-0.3205	No
93	Ifngr1	13233	-0.165	-0.3189	No
94	Stat1	13334	-0.171	-0.3197	No
95	Eif3a	13592	-0.183	-0.3288	No
96	Itgal	13641	-0.186	-0.3263	No
97	F2r	13716	-0.190	-0.3252	No
98	Ccl5	13763	-0.192	-0.3225	No
99	Tgfb1	13847	-0.197	-0.3217	No
100	Nck1	14003	-0.204	-0.3246	No
101	Eif3d	14247	-0.218	-0.3320	Yes
102	Bcl10	14328	-0.223	-0.3303	Yes
103	Galnt1	14336	-0.224	-0.3246	Yes
104	Il11	14350	-0.224	-0.3192	Yes
105	B2m	14378	-0.226	-0.3145	Yes
106	Rps9	14454	-0.230	-0.3123	Yes
107	Ptprc	14564	-0.237	-0.3118	Yes
108	Thy1	14583	-0.238	-0.3063	Yes
109	Psmb10	14846	-0.254	-0.3137	Yes
110	Tlr2	14853	-0.254	-0.3071	Yes
111	Ly86	15110	-0.268	-0.3138	Yes
112	Akt1	15173	-0.272	-0.3098	Yes
113	Socs1	15369	-0.283	-0.3128	Yes
114	Bcl3	15532	-0.296	-0.3136	Yes
115	Tpd52	15626	-0.303	-0.3104	Yes
116	Icosl	15713	-0.308	-0.3067	Yes
117	Trat1	15803	-0.314	-0.3030	Yes
118	Cd4	15805	-0.314	-0.2945	Yes
119	Cd7	15813	-0.316	-0.2863	Yes
120	Pf4	16062	-0.332	-0.2908	Yes
121	Tgfb2	16215	-0.346	-0.2897	Yes
122	Il18	16312	-0.354	-0.2853	Yes
123	Tapbp	16343	-0.356	-0.2772	Yes
124	Mtif2	16370	-0.358	-0.2689	Yes
125	Klrd1	16485	-0.368	-0.2651	Yes
126	Gcnt1	16510	-0.370	-0.2563	Yes
127	Tlr1	16531	-0.373	-0.2472	Yes
128	Egfr	16542	-0.374	-0.2376	Yes
129	Brca1	16912	-0.412	-0.2466	Yes
130	Prkcg	16974	-0.418	-0.2385	Yes
131	Ache	17001	-0.420	-0.2285	Yes
132	Nme1	17403	-0.473	-0.2375	Yes
133	Il4	17432	-0.477	-0.2261	Yes
134	Cdkn2a	17435	-0.478	-0.2132	Yes
135	Il4ra	17810	-0.543	-0.2188	Yes
136	Ccr5	17818	-0.544	-0.2044	Yes
137	Cd74	17846	-0.551	-0.1908	Yes
138	Itgb2	18024	-0.611	-0.1839	Yes
139	Il12rb1	18162	-0.677	-0.1729	Yes
140	Ifngr2	18175	-0.682	-0.1550	Yes
141	Dyrk3	18197	-0.690	-0.1373	Yes
142	Fgr	18239	-0.717	-0.1200	Yes
143	Il2rg	18264	-0.736	-0.1012	Yes
144	Ctss	18354	-0.852	-0.0829	Yes
145	Fcgr2b	18388	-0.945	-0.0589	Yes
146	H2-Aa	18399	-1.068	-0.0304	Yes
147	Fas	18404	-1.129	0.0002	Yes