DatasetBasophil.Basophil_Pheno.cls
#Group6_versus_Group8.Basophil_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeBasophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.23306192
Normalized Enrichment Score (NES)-0.88866204
Nominal p-value0.64541835
FDR q-value0.7887262
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Glrx21970.7740.0477Yes
2Gsr4350.6310.0820Yes
3Atox17600.5540.1052Yes
4Pfkp10650.4870.1244Yes
5Txnrd117280.4000.1154Yes
6Abcc117650.3940.1436Yes
7Glrx24090.3260.1301Yes
8Fes24170.3260.1548Yes
9Stk2526360.3070.1653Yes
10Gclc29760.2790.1664Yes
11Ipcef132140.2640.1725Yes
12Msra32610.2610.1899Yes
13Junb33920.2560.2018Yes
14Sbno236940.2440.2025Yes
15Oxsr137830.2370.2155Yes
16Mgst147010.1840.1746No
17Nqo147650.1810.1847No
18Mpo52830.1520.1653No
19Egln262020.1000.1179No
20Prdx162270.0990.1241No
21Lsp166640.0750.1036No
22Sod180260.0080.0225No
23Prdx69018-0.025-0.0351No
24Ptpa9101-0.028-0.0379No
25Scaf49306-0.037-0.0472No
26G6pdx9318-0.038-0.0450No
27Txnrd29372-0.040-0.0451No
28Hmox29515-0.047-0.0500No
29Ercc210123-0.076-0.0806No
30Cat10168-0.078-0.0772No
31Gclm10345-0.085-0.0812No
32Prnp10654-0.101-0.0919No
33Selenos10797-0.109-0.0921No
34Hhex11518-0.150-0.1238No
35Lamtor511648-0.157-0.1195No
36Ftl111992-0.175-0.1266No
37Cdkn2d12018-0.177-0.1145No
38Mbp12936-0.230-0.1518No
39Prdx413432-0.263-0.1613No
40Gpx314623-0.347-0.2060No
41Txn115074-0.394-0.2027No
42Prdx215496-0.447-0.1936No
43Pdlim115521-0.450-0.1604No
44Gpx415662-0.474-0.1323No
45Srxn115761-0.490-0.1005No
46Sod216201-0.593-0.0813No
47Ndufa616295-0.630-0.0384No
48Ndufs216571-0.8130.0077No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY