DatasetBasophil.Basophil_Pheno.cls
#Group6_versus_Group8.Basophil_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeBasophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.24486949
Normalized Enrichment Score (NES)-1.0815175
Nominal p-value0.31355932
FDR q-value0.61731243
FWER p-Value0.998
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Il157630.553-0.0335No
2Wars18320.543-0.0253No
3Cd748640.533-0.0150No
4St8sia49580.515-0.0089No
5Bank19760.5100.0017No
6Ncoa310500.4900.0085No
7Ptgs210560.4880.0193No
8Pfkp10650.4870.0299No
9Cd8610710.4860.0406No
10Stat211380.4720.0474No
11P2ry1412250.4540.0526No
12Rnf3112770.4460.0596No
13Ciita14600.4280.0584No
14Eif4e315290.4200.0638No
15Nod116530.4070.0657No
16Nfkb117160.4030.0711No
17St3gal518990.3810.0688No
18Cd6919300.3780.0756No
19Cfb19420.3770.0835No
20Gch119850.3740.0895No
21Il620430.3670.0944No
22Icam120560.3660.1020No
23Ptpn121930.3510.1018No
24Peli123260.3370.1015No
25Lysmd224710.3220.1001No
26Rbck124830.3210.1067No
27Ripk227650.2970.0965No
28Lcp229060.2860.0946No
29Bst229440.2820.0988No
30H2-Aa31480.2680.0926No
31Socs131940.2660.0959No
32Txnip32410.2620.0991No
33Cd3832800.2600.1027No
34Mx233040.2590.1072No
35Fas36190.2500.0940No
36Cmtr136460.2480.0980No
37Sppl2a36840.2450.1014No
38Tor1b37610.2400.1022No
39Rapgef638770.2310.1005No
40Hif1a40290.2240.0965No
41Tnfaip341090.2190.0967No
42Ripk141110.2190.1017No
43Selp42180.2120.1001No
44Cd27442430.2100.1034No
45Irf842460.2100.1081No
46Isoc142880.2070.1103No
47Psmb243200.2040.1131No
48Casp743910.1990.1134No
49Trim2647640.1810.0950No
50Zbp147710.1800.0987No
51Cmklr149490.1700.0919No
52Irf750020.1670.0926No
53Marchf151030.1610.0902No
54Casp851220.1600.0928No
55Isg1552040.1560.0914No
56H2-DMa52800.1520.0904No
57Oasl153110.1510.0920No
58Rsad253760.1480.0915No
59Pla2g4a54390.1440.0910No
60Btg155090.1410.0900No
61Il4ra56910.1290.0820No
62Myd8858350.1210.0761No
63Arid5b61220.1050.0613No
64Gpr1862460.0980.0560No
65Ptpn264590.0860.0452No
66Helz269300.0620.0182No
67Mvp69940.0580.0157No
68Il15ra70970.0530.0107No
69Nup9371300.0520.0100No
70Jak272190.0480.0058No
71Tnfsf1072660.0450.0040No
72Mthfd273190.0420.0018No
73Arl4a73560.0400.0006No
74Nfkbia74330.036-0.0032No
75Ifi3076230.029-0.0140No
76Pml77420.023-0.0206No
77Parp1279810.010-0.0347No
78Znfx181650.002-0.0458No
79Ifi4481780.002-0.0464No
80Socs382960.000-0.0535No
81Sp1108540-0.002-0.0682No
82Cdkn1a8774-0.013-0.0820No
83Stat18851-0.016-0.0862No
84Irf28940-0.021-0.0910No
85Irf19090-0.028-0.0994No
86Lats29178-0.032-0.1039No
87Parp149229-0.034-0.1062No
88Itgb79256-0.036-0.1069No
89Sri9406-0.042-0.1150No
90Trim149809-0.061-0.1379No
91Auts210021-0.071-0.1491No
92Vamp810038-0.072-0.1484No
93Psmb1010108-0.075-0.1508No
94Rnf21310281-0.083-0.1593No
95Gbp310588-0.098-0.1756No
96Il18bp10664-0.102-0.1778No
97Nampt10731-0.105-0.1794No
98Samhd110763-0.107-0.1789No
99Trafd110863-0.113-0.1823No
100Isg2010881-0.113-0.1807No
101Plscr111238-0.135-0.1992No
102Irf911469-0.146-0.2098No
103Casp311496-0.148-0.2080No
104Usp1811560-0.152-0.2083No
105Cmpk211643-0.156-0.2097No
106Stat411652-0.157-0.2066No
107Ptpn611717-0.161-0.2068No
108Trim2511742-0.162-0.2046No
109Ifih111930-0.172-0.2120No
110Ifnar211935-0.172-0.2083No
111Herc611949-0.173-0.2051No
112Ifi3512048-0.179-0.2070No
113Pnpt112139-0.184-0.2082No
114Epsti112143-0.184-0.2042No
115Psma312521-0.204-0.2224No
116Ddx6012555-0.207-0.2196No
117Lap312556-0.207-0.2149No
118Eif2ak212608-0.211-0.2132No
119Ifi2712704-0.217-0.2140No
120Pde4b12878-0.227-0.2193No
121Ube2l613148-0.244-0.2300No
122Pnp13170-0.245-0.2257No
123Samd9l13345-0.257-0.2304No
124Il10ra13370-0.259-0.2259No
125Oas213387-0.260-0.2210No
126Casp113390-0.260-0.2152No
127Upp113686-0.280-0.2266No
128Rtp413827-0.287-0.2285No
129Tap113892-0.292-0.2257No
130Vcam114119-0.309-0.2324No
131Pim114137-0.311-0.2263No
132Adar14239-0.316-0.2252No
133Oas314449-0.334-0.2302No
134Tapbp14458-0.335-0.2231No
135Slc25a2814819-0.366-0.2365Yes
136Xaf114852-0.370-0.2300Yes
137Bpgm14963-0.381-0.2280Yes
138Psmb915048-0.392-0.2242Yes
139Ifitm315057-0.392-0.2157Yes
140Stat315118-0.399-0.2102Yes
141Rigi15131-0.401-0.2018Yes
142Ifit215150-0.403-0.1937Yes
143Batf215165-0.405-0.1853Yes
144Tnfaip215218-0.411-0.1791Yes
145Ogfr15280-0.417-0.1733Yes
146Trim2115451-0.441-0.1736Yes
147Psme115513-0.449-0.1670Yes
148Ly6e15584-0.461-0.1608Yes
149Tdrd715625-0.468-0.1525Yes
150Irf515647-0.471-0.1431Yes
151Psmb815680-0.478-0.1341Yes
152Psme215721-0.485-0.1254Yes
153Il715813-0.500-0.1196Yes
154Ifitm215926-0.520-0.1145Yes
155Fgl216017-0.540-0.1076Yes
156Vamp516030-0.543-0.0960Yes
157Nlrc516195-0.592-0.0924Yes
158Sod216201-0.593-0.0792Yes
159Casp416281-0.626-0.0697Yes
160Dhx5816485-0.735-0.0652Yes
161Psma216534-0.768-0.0506Yes
162Lgals3bp16615-0.862-0.0358Yes
163B2m16618-0.869-0.0161Yes
164Nmi16653-0.9200.0028Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE