DatasetBasophil.Basophil_Pheno.cls
#Group6_versus_Group8.Basophil_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeBasophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.3888525
Normalized Enrichment Score (NES)-1.434939
Nominal p-value0.08423326
FDR q-value0.15055594
FWER p-Value0.52
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Il157630.553-0.0231No
2Wars18320.543-0.0047No
3Cd748640.5330.0154No
4Stat211380.4720.0185No
5Rnf3112770.4460.0286No
6Procr13390.4390.0430No
7Tmem14024460.324-0.0102No
8Cd4726720.305-0.0111No
9Ripk227650.297-0.0044No
10Bst229440.282-0.0034No
11Txnip32410.262-0.0104No
12Mx233040.259-0.0034No
13Cmtr136460.248-0.0137No
14Trim2647640.181-0.0735No
15Mov1048810.174-0.0733No
16Irf750020.167-0.0736No
17Casp851220.160-0.0741No
18Isg1552040.156-0.0726No
19Oasl153110.151-0.0727No
20Rsad253760.148-0.0705No
21Il4ra56910.129-0.0840No
22Oas1a63320.093-0.1187No
23Csf163830.090-0.1180No
24Tent5a67860.069-0.1393No
25Helz269300.062-0.1454No
26Nub174600.036-0.1757No
27Ifi3076230.029-0.1843No
28Parp1279810.010-0.2054No
29Elf181550.003-0.2157No
30Ifi4481780.002-0.2169No
31Sp1108540-0.002-0.2386No
32Ncoa78661-0.007-0.2455No
33Irf28940-0.021-0.2614No
34Sell8987-0.023-0.2632No
35Irf19090-0.028-0.2682No
36Parp149229-0.034-0.2750No
37Trim149809-0.061-0.3074No
38Gbp310588-0.098-0.3501No
39Trafd110863-0.113-0.3620No
40Isg2010881-0.113-0.3583No
41Plscr111238-0.135-0.3742No
42Irf911469-0.146-0.3820Yes
43Usp1811560-0.152-0.3811Yes
44Cmpk211643-0.156-0.3796Yes
45Trim2511742-0.162-0.3788Yes
46Uba711910-0.171-0.3818Yes
47Ifih111930-0.172-0.3758Yes
48Herc611949-0.173-0.3698Yes
49Ifi3512048-0.179-0.3683Yes
50Pnpt112139-0.184-0.3661Yes
51Epsti112143-0.184-0.3587Yes
52Psma312521-0.204-0.3729Yes
53Ddx6012555-0.207-0.3664Yes
54Lap312556-0.207-0.3578Yes
55Eif2ak212608-0.211-0.3522Yes
56Ifi2712704-0.217-0.3489Yes
57Parp912930-0.230-0.3530Yes
58Ube2l613148-0.244-0.3559Yes
59Samd9l13345-0.257-0.3571Yes
60Casp113390-0.260-0.3490Yes
61Ccrl213596-0.274-0.3500Yes
62Rtp413827-0.287-0.3520Yes
63Tap113892-0.292-0.3438Yes
64Adar14239-0.316-0.3516Yes
65Trim12c14315-0.323-0.3427Yes
66Lpar614807-0.364-0.3572Yes
67Slc25a2814819-0.366-0.3428Yes
68Gmpr14848-0.369-0.3292Yes
69Psmb915048-0.392-0.3250Yes
70Ifitm315057-0.392-0.3092Yes
71Mvb12a15109-0.398-0.2959Yes
72Ifit215150-0.403-0.2816Yes
73Batf215165-0.405-0.2657Yes
74Ifitm115172-0.406-0.2493Yes
75Ogfr15280-0.417-0.2385Yes
76Trim2115451-0.441-0.2306Yes
77Psme115513-0.449-0.2157Yes
78Ly6e15584-0.461-0.2009Yes
79Tdrd715625-0.468-0.1839Yes
80Psmb815680-0.478-0.1674Yes
81Psme215721-0.485-0.1498Yes
82Il715813-0.500-0.1346Yes
83Ifitm215926-0.520-0.1199Yes
84Cnp16306-0.633-0.1165Yes
85Dhx5816485-0.735-0.0969Yes
86Lgals3bp16615-0.862-0.0690Yes
87B2m16618-0.869-0.0332Yes
88Nmi16653-0.9200.0028Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE