DatasetBasophil.Basophil_Pheno.cls
#Group6_versus_Group8.Basophil_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeBasophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)-0.3232347
Normalized Enrichment Score (NES)-1.3532484
Nominal p-value0.12058212
FDR q-value0.22480088
FWER p-Value0.727
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ube2t940.9380.0160No
2Pan29200.524-0.0218No
3Cnot913300.439-0.0364No
4Dnmt115680.414-0.0412No
5Ppm1d17670.394-0.0440No
6Tbrg422980.340-0.0682No
7Shmt123510.333-0.0637No
8E2f825710.312-0.0697No
9Atad227130.301-0.0713No
10Ccp11027800.295-0.0684No
11Mxd327820.295-0.0616No
12Ak230690.274-0.0726No
13Dscc130710.274-0.0663No
14Rfc230730.274-0.0600No
15Pola232480.262-0.0645No
16Prps136440.248-0.0827No
17Cbx536540.247-0.0775No
18Rfc336720.246-0.0729No
19Stag136780.245-0.0675No
20Pold138300.234-0.0712No
21Donson39800.228-0.0749No
22Prkdc39820.228-0.0697No
23Pold340380.224-0.0679No
24Hus140580.222-0.0639No
25Tipin40880.220-0.0605No
26Eed42220.212-0.0637No
27Melk42650.208-0.0614No
28Diaph342690.208-0.0567No
29Slbp44090.198-0.0606No
30Mki6745280.196-0.0632No
31Srsf245760.193-0.0616No
32H2az146040.190-0.0588No
33Bub1b46490.187-0.0571No
34Gins347270.183-0.0575No
35Plk447690.180-0.0558No
36Nup15349850.168-0.0650No
37Gins450810.162-0.0670No
38Rad5050910.162-0.0638No
39Mcm651020.161-0.0606No
40Mms22l51810.157-0.0617No
41Cdca352750.152-0.0638No
42Brca253140.151-0.0626No
43Lsm853970.147-0.0642No
44Rpa155010.141-0.0672No
45Rad2155710.136-0.0682No
46Brca159620.114-0.0892No
47Rrm260130.111-0.0897No
48Msh260850.107-0.0915No
49Rad51ap162160.099-0.0971No
50Orc262740.097-0.0983No
51Cks264000.090-0.1038No
52Gins164110.089-0.1023No
53Birc564180.089-0.1006No
54Cdkn2a64250.088-0.0989No
55Hells65690.080-0.1057No
56Pcna66080.078-0.1062No
57Bard166420.076-0.1065No
58Kif467680.070-0.1124No
59Racgap168130.068-0.1135No
60Rfc168490.066-0.1141No
61Aurka69550.061-0.1191No
62Brms1l69930.058-0.1200No
63Lbr70180.057-0.1201No
64Ipo770550.055-0.1210No
65Rad51c70650.054-0.1203No
66Ezh271560.051-0.1246No
67Cit71810.049-0.1249No
68Nup20572700.045-0.1292No
69Espl172870.044-0.1291No
70Mthfd273190.042-0.1300No
71Prim274540.036-0.1373No
72Pole475030.033-0.1394No
73Pole75250.033-0.1399No
74Wdr9075260.033-0.1392No
75Dck76600.027-0.1466No
76Nop5677010.025-0.1485No
77Ilf378670.016-0.1581No
78Psmc3ip79180.014-0.1608No
79Snrpb79530.012-0.1626No
80Lmnb180390.007-0.1676No
81Mcm48646-0.007-0.2041No
82Cdkn1a8774-0.013-0.2115No
83Depdc1a8847-0.016-0.2155No
84Dek8863-0.017-0.2160No
85Pop78877-0.018-0.2164No
86Nudt218879-0.018-0.2161No
87Pds5b8885-0.018-0.2159No
88Dclre1b8946-0.021-0.2191No
89Kif18b9037-0.026-0.2239No
90Cdc209059-0.027-0.2246No
91Spc249235-0.035-0.2344No
92Mcm79260-0.036-0.2350No
93Smc1a9349-0.039-0.2394No
94Tra2b9391-0.041-0.2410No
95Tfrc9420-0.043-0.2417No
96Tacc39432-0.043-0.2414No
97Kif229455-0.044-0.2417No
98Asf1a9722-0.057-0.2565No
99Ccnb29747-0.059-0.2565No
100Ranbp19857-0.064-0.2617No
101Ing39903-0.065-0.2629No
102Tk19910-0.065-0.2617No
103Smc39961-0.068-0.2632No
104Ctcf10016-0.071-0.2648No
105Cdc25a10141-0.077-0.2705No
106Ube2s10343-0.085-0.2807No
107Nup10710348-0.085-0.2790No
108Mcm310458-0.090-0.2835No
109Lig110507-0.093-0.2843No
110Timeless10738-0.105-0.2958No
111Dlgap510759-0.107-0.2945No
112Pnn10813-0.110-0.2952No
113Cse1l11075-0.124-0.3081No
114Xpo111181-0.131-0.3114No
115Trip1311207-0.133-0.3099No
116Exosc811218-0.134-0.3074No
117Aurkb11473-0.147-0.3194No
118Cdkn1b11524-0.150-0.3189No
119Mre11a11582-0.153-0.3188No
120Mcm511656-0.157-0.3196Yes
121Xrcc611669-0.158-0.3166Yes
122Ccne111718-0.161-0.3158Yes
123Spc2511789-0.164-0.3163Yes
124Mcm211873-0.169-0.3174Yes
125Mybl211892-0.170-0.3145Yes
126Asf1b11951-0.173-0.3140Yes
127Rnaseh2a11960-0.174-0.3105Yes
128Smc612087-0.181-0.3139Yes
129Ddx39a12129-0.183-0.3122Yes
130Ubr712228-0.189-0.3137Yes
131Rpa212245-0.190-0.3103Yes
132Usp112333-0.194-0.3111Yes
133Ppp1r812338-0.195-0.3068Yes
134Hnrnpd12435-0.199-0.3080Yes
135Anp32e12465-0.200-0.3051Yes
136Cenpm12631-0.212-0.3102Yes
137Tmpo12635-0.212-0.3054Yes
138Wee112687-0.215-0.3035Yes
139H2ax12821-0.223-0.3064Yes
140Zw1012937-0.231-0.3081Yes
141Pms212947-0.231-0.3032Yes
142Ncapd212964-0.232-0.2988Yes
143Hmga1b13018-0.236-0.2966Yes
144Psip113058-0.238-0.2934Yes
145Srsf113289-0.253-0.3015Yes
146Cdk113321-0.255-0.2974Yes
147Gspt113342-0.256-0.2927Yes
148Cenpe13353-0.257-0.2873Yes
149Prdx413432-0.263-0.2860Yes
150Tcf1913556-0.271-0.2872Yes
151Pttg113810-0.287-0.2958Yes
152Kif2c13815-0.287-0.2894Yes
153Cdkn2c13841-0.289-0.2843Yes
154Spag513955-0.298-0.2842Yes
155Cdc25b14171-0.313-0.2900Yes
156Smc414380-0.328-0.2950Yes
157Ssrp114430-0.332-0.2902Yes
158Top2a14440-0.333-0.2831Yes
159Nap1l114476-0.337-0.2774Yes
160Dut14490-0.337-0.2703Yes
161Plk114595-0.345-0.2686Yes
162Cdk414618-0.347-0.2619Yes
163Trp5314657-0.349-0.2562Yes
164Chek214678-0.351-0.2492Yes
165Mlh114679-0.351-0.2411Yes
166Syncrip14700-0.353-0.2341Yes
167Pa2g414756-0.359-0.2291Yes
168Suv39h114857-0.370-0.2266Yes
169Nbn14875-0.371-0.2190Yes
170Orc614920-0.376-0.2130Yes
171Chek114929-0.377-0.2047Yes
172Lyar15077-0.395-0.2045Yes
173Cks1b15082-0.395-0.1955Yes
174Hmmr15108-0.398-0.1878Yes
175Myc15162-0.404-0.1817Yes
176Nme115174-0.406-0.1729Yes
177Eif2s115179-0.406-0.1638Yes
178Dctpp115210-0.409-0.1561Yes
179Nasp15217-0.411-0.1469Yes
180Rbbp715231-0.412-0.1382Yes
181Cdca815293-0.418-0.1322Yes
182Nolc115365-0.428-0.1265Yes
183Hmgb215495-0.447-0.1240Yes
184Mad2l115517-0.449-0.1149Yes
185Pold215611-0.465-0.1097Yes
186Hmgb315633-0.469-0.1001Yes
187Phf5a15673-0.477-0.0914Yes
188Luc7l315701-0.482-0.0819Yes
189Ung15752-0.488-0.0736Yes
190Cdkn315803-0.497-0.0651Yes
191Tubb515982-0.533-0.0635Yes
192Ran16048-0.549-0.0547Yes
193Tubg116078-0.556-0.0436Yes
194Rpa316187-0.589-0.0365Yes
195Jpt116301-0.631-0.0287Yes
196Paics16354-0.657-0.0166Yes
197Stmn116501-0.744-0.0082Yes
198Rad116619-0.8700.0048Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS