Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group6_versus_Group8.Basophil_Pheno.cls #Group6_versus_Group8_repos
Phenotype	Basophil_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.19130257
Normalized Enrichment Score (NES)	0.9676806
Nominal p-value	0.563147
FDR q-value	0.8494794
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Dock9	29	1.081	0.0285	Yes
2	Kif2a	188	0.778	0.0407	Yes
3	C3	392	0.654	0.0467	Yes
4	Spock2	518	0.607	0.0561	Yes
5	F7	530	0.605	0.0724	Yes
6	Atox1	760	0.554	0.0740	Yes
7	Casp9	848	0.539	0.0838	Yes
8	Dgkg	898	0.528	0.0956	Yes
9	Prep	975	0.510	0.1053	Yes
10	Dgkh	1037	0.494	0.1154	Yes
11	Lck	1234	0.452	0.1162	Yes
12	Dusp6	1353	0.438	0.1213	Yes
13	Cr2	1424	0.431	0.1292	Yes
14	Csrp1	1566	0.415	0.1322	Yes
15	Adam9	1695	0.406	0.1359	Yes
16	Cfb	1942	0.377	0.1315	Yes
17	Ehd1	1949	0.377	0.1417	Yes
18	Plg	2002	0.372	0.1490	Yes
19	Il6	2043	0.367	0.1568	Yes
20	Fyn	2238	0.346	0.1548	Yes
21	Xpnpep1	2325	0.337	0.1590	Yes
22	Hspa5	2349	0.333	0.1669	Yes
23	Psen1	2375	0.330	0.1746	Yes
24	Cdh13	2448	0.324	0.1793	Yes
25	Lrp1	2475	0.321	0.1868	Yes
26	C2	2607	0.309	0.1875	Yes
27	Lcp2	2906	0.286	0.1775	Yes
28	Gng2	2957	0.281	0.1823	Yes
29	Apoc1	3151	0.268	0.1781	Yes
30	Fdx1	3187	0.266	0.1835	Yes
31	Cpm	3463	0.255	0.1740	Yes
32	Kcnip2	3466	0.255	0.1810	Yes
33	Fcer1g	3696	0.244	0.1740	Yes
34	Sirt6	3705	0.243	0.1803	Yes
35	Hspa1a	3737	0.241	0.1852	Yes
36	Kcnip3	3748	0.241	0.1913	Yes
37	Col4a2	4007	0.227	0.1820	No
38	Tnfaip3	4109	0.219	0.1821	No
39	Plek	4347	0.202	0.1734	No
40	Rnf4	4350	0.202	0.1789	No
41	Casp7	4391	0.199	0.1821	No
42	Cp	4418	0.198	0.1860	No
43	Ctss	4543	0.195	0.1840	No
44	Prkcd	4846	0.176	0.1707	No
45	Pik3r5	4983	0.168	0.1671	No
46	Irf7	5002	0.167	0.1707	No
47	Phex	5043	0.164	0.1729	No
48	Lgals3	5190	0.157	0.1685	No
49	Ctsc	5255	0.153	0.1689	No
50	Pla2g4a	5439	0.144	0.1619	No
51	Gca	5447	0.144	0.1654	No
52	Msrb1	5477	0.142	0.1677	No
53	Usp16	5641	0.131	0.1615	No
54	Calm3	6535	0.082	0.1098	No
55	Lta4h	6726	0.072	0.1004	No
56	Ctsh	6963	0.060	0.0878	No
57	Itgam	6996	0.058	0.0875	No
58	Prcp	7024	0.056	0.0874	No
59	Rhog	7043	0.055	0.0879	No
60	F10	7044	0.055	0.0894	No
61	Rabif	7079	0.054	0.0889	No
62	Usp15	7081	0.054	0.0903	No
63	Pdp1	7128	0.052	0.0890	No
64	C1qc	7132	0.052	0.0903	No
65	Jak2	7219	0.048	0.0864	No
66	Brpf3	7314	0.042	0.0819	No
67	Gnai3	7418	0.037	0.0767	No
68	F5	7586	0.030	0.0675	No
69	Lamp2	7754	0.023	0.0580	No
70	Dock10	7782	0.021	0.0570	No
71	Ang	7929	0.013	0.0485	No
72	Pdgfb	8229	0.000	0.0305	No
73	Dyrk2	8568	-0.004	0.0101	No
74	Src	8572	-0.004	0.0101	No
75	Lipa	8600	-0.005	0.0086	No
76	Cblb	8913	-0.019	-0.0097	No
77	Irf2	8940	-0.021	-0.0107	No
78	Cd46	8957	-0.022	-0.0111	No
79	Pik3cg	9036	-0.025	-0.0151	No
80	Gnai2	9075	-0.027	-0.0166	No
81	Irf1	9090	-0.028	-0.0167	No
82	Ctsd	9116	-0.029	-0.0174	No
83	Gmfb	9121	-0.030	-0.0168	No
84	Pfn1	9379	-0.041	-0.0312	No
85	Maff	9703	-0.056	-0.0491	No
86	Akap10	9704	-0.056	-0.0476	No
87	Grb2	9723	-0.058	-0.0470	No
88	Gpd2	9804	-0.061	-0.0502	No
89	Zeb1	9815	-0.061	-0.0491	No
90	Usp8	9924	-0.067	-0.0537	No
91	Stx4a	9936	-0.067	-0.0525	No
92	Prss36	10139	-0.077	-0.0626	No
93	Vcpip1	10175	-0.078	-0.0625	No
94	Serpinb2	10271	-0.082	-0.0659	No
95	Raf1	10310	-0.083	-0.0659	No
96	Cdk5r1	10324	-0.084	-0.0643	No
97	Olr1	10945	-0.118	-0.0985	No
98	Was	10961	-0.119	-0.0961	No
99	Usp14	11047	-0.122	-0.0978	No
100	Plscr1	11238	-0.135	-0.1055	No
101	Cd36	11291	-0.138	-0.1048	No
102	Ppp2cb	11387	-0.142	-0.1066	No
103	Casp3	11496	-0.148	-0.1089	No
104	Pik3ca	11609	-0.155	-0.1114	No
105	Lyn	11827	-0.166	-0.1198	No
106	Gp1ba	12077	-0.181	-0.1298	No
107	Dock4	12224	-0.189	-0.1334	No
108	Serpinc1	12292	-0.192	-0.1321	No
109	Gp9	12313	-0.193	-0.1279	No
110	Ctsl	12401	-0.197	-0.1276	No
111	Ctsb	12405	-0.197	-0.1223	No
112	Dusp5	12466	-0.200	-0.1203	No
113	Lap3	12556	-0.207	-0.1199	No
114	Fn1	12712	-0.217	-0.1232	No
115	Cpq	12859	-0.225	-0.1257	No
116	Cebpb	12954	-0.231	-0.1249	No
117	Anxa5	12996	-0.235	-0.1208	No
118	Rce1	13043	-0.238	-0.1169	No
119	S100a13	13139	-0.243	-0.1159	No
120	Sh2b3	13331	-0.256	-0.1203	No
121	Casp1	13390	-0.260	-0.1165	No
122	Mmp8	13683	-0.280	-0.1263	No
123	Hnf4a	13791	-0.285	-0.1248	No
124	Gnb4	13935	-0.296	-0.1252	No
125	Gata3	14018	-0.304	-0.1217	No
126	Pclo	14049	-0.305	-0.1149	No
127	Pim1	14137	-0.311	-0.1115	No
128	C1qa	14213	-0.316	-0.1072	No
129	Mmp14	14304	-0.322	-0.1036	No
130	Dpp4	14436	-0.333	-0.1022	No
131	L3mbtl4	14529	-0.340	-0.0983	No
132	Mmp15	14542	-0.341	-0.0895	No
133	Actn2	14545	-0.341	-0.0800	No
134	Timp2	14924	-0.376	-0.0924	No
135	Gzmb	14965	-0.381	-0.0841	No
136	Psmb9	15048	-0.392	-0.0781	No
137	Gnb2	15133	-0.401	-0.0720	No
138	Plaur	15136	-0.402	-0.0609	No
139	Rbsn	15236	-0.413	-0.0553	No
140	Lgmn	15284	-0.418	-0.0464	No
141	Prdm4	15312	-0.421	-0.0363	No
142	S100a9	15385	-0.431	-0.0286	No
143	Ppp4c	15392	-0.432	-0.0169	No
144	Calm1	15450	-0.440	-0.0080	No
145	Car2	15578	-0.459	-0.0029	No
146	Gngt2	15805	-0.497	-0.0026	No
147	F8	16011	-0.539	0.0001	No
148	Casp4	16281	-0.626	0.0013	No
149	Ctso	16606	-0.855	0.0056	No