Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group3_versus_Group4.Basophil_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.21656926
Normalized Enrichment Score (NES)	-0.97721964
Nominal p-value	0.49896482
FDR q-value	0.8246393
FWER p-Value	0.996

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tlr2	24	1.134	0.0276	No
2	Ccnd1	143	0.811	0.0412	No
3	Marcks	203	0.756	0.0570	No
4	Birc2	224	0.742	0.0748	No
5	Sphk1	395	0.636	0.0808	No
6	Dusp5	478	0.610	0.0915	No
7	Cd44	528	0.595	0.1038	No
8	Tnfsf9	569	0.584	0.1163	No
9	Nampt	574	0.581	0.1310	No
10	Tnfaip2	833	0.528	0.1289	No
11	Klf2	857	0.523	0.1409	No
12	Bcl6	896	0.514	0.1517	No
13	Zc3h12a	942	0.501	0.1618	No
14	Dram1	977	0.495	0.1725	No
15	Mcl1	1059	0.478	0.1798	No
16	Pdlim5	1165	0.464	0.1853	No
17	Relb	1457	0.428	0.1787	No
18	Cd80	1555	0.418	0.1836	No
19	Gem	1734	0.397	0.1830	No
20	Tap1	1807	0.390	0.1886	No
21	Zbtb10	2029	0.366	0.1846	No
22	Fut4	2149	0.352	0.1864	No
23	Ifngr2	2479	0.322	0.1748	No
24	Hbegf	2612	0.310	0.1747	No
25	Ptger4	2959	0.281	0.1610	No
26	Sgk1	3070	0.272	0.1614	No
27	Sat1	3359	0.256	0.1505	No
28	B4galt1	3377	0.254	0.1560	No
29	Zfp36	3440	0.250	0.1586	No
30	Fosl1	3523	0.246	0.1600	No
31	Litaf	3787	0.233	0.1500	No
32	Lamb3	3794	0.232	0.1556	No
33	Ier3	3969	0.222	0.1508	No
34	Panx1	4099	0.212	0.1484	No
35	Pnrc1	4264	0.201	0.1436	No
36	Traf1	4275	0.201	0.1482	No
37	Irf1	4430	0.193	0.1438	No
38	Il15ra	4649	0.179	0.1352	No
39	Dusp2	4707	0.176	0.1363	No
40	Ifit2	5056	0.158	0.1193	No
41	Jun	5219	0.149	0.1133	No
42	Gfpt2	5225	0.148	0.1168	No
43	Pmepa1	5720	0.123	0.0901	No
44	Bcl3	5800	0.119	0.0884	No
45	Rel	6046	0.106	0.0763	No
46	Egr1	6114	0.103	0.0749	No
47	Ldlr	6119	0.103	0.0773	No
48	Bhlhe40	6143	0.102	0.0785	No
49	Nfkb1	6215	0.097	0.0767	No
50	Gadd45b	6234	0.097	0.0781	No
51	Klf6	6396	0.089	0.0706	No
52	Il6st	6522	0.082	0.0652	No
53	Id2	6870	0.067	0.0459	No
54	Stat5a	6933	0.063	0.0438	No
55	Slc2a3	6939	0.063	0.0451	No
56	Atp2b1	7053	0.058	0.0398	No
57	Ier2	7060	0.058	0.0409	No
58	Olr1	7215	0.051	0.0329	No
59	Cflar	7341	0.045	0.0265	No
60	Smad3	7661	0.031	0.0080	No
61	Myc	7908	0.020	-0.0064	No
62	Sqstm1	7958	0.018	-0.0089	No
63	B4galt5	8005	0.016	-0.0112	No
64	Sod2	8094	0.012	-0.0162	No
65	Birc3	8112	0.011	-0.0170	No
66	Nfkbia	8122	0.011	-0.0173	No
67	Slc2a6	8129	0.011	-0.0173	No
68	Gch1	8142	0.010	-0.0178	No
69	Ptpre	8273	0.004	-0.0256	No
70	Klf4	8381	0.000	-0.0320	No
71	Snn	8497	-0.002	-0.0389	No
72	Dennd5a	8526	-0.003	-0.0405	No
73	Btg2	8599	-0.007	-0.0447	No
74	Socs3	8731	-0.012	-0.0523	No
75	Serpinb2	8787	-0.015	-0.0553	No
76	Plaur	8944	-0.021	-0.0641	No
77	Tnip2	8960	-0.022	-0.0645	No
78	Map2k3	8985	-0.023	-0.0654	No
79	Mxd1	8995	-0.023	-0.0653	No
80	Tubb2a	9007	-0.024	-0.0654	No
81	Clcf1	9036	-0.025	-0.0664	No
82	Tnfaip3	9124	-0.028	-0.0709	No
83	Rcan1	9224	-0.033	-0.0761	No
84	Rnf19b	9858	-0.062	-0.1127	No
85	Gadd45a	9869	-0.063	-0.1117	No
86	Cd69	9937	-0.066	-0.1141	No
87	Tnfaip8	9991	-0.068	-0.1156	No
88	Rela	10166	-0.077	-0.1241	No
89	Ccnl1	10300	-0.083	-0.1300	No
90	Per1	10313	-0.084	-0.1286	No
91	Nr4a2	10767	-0.104	-0.1533	No
92	Pde4b	10819	-0.106	-0.1537	No
93	Maff	10944	-0.113	-0.1583	No
94	Nfat5	11032	-0.116	-0.1605	No
95	Phlda1	11077	-0.118	-0.1602	No
96	Pfkfb3	11420	-0.135	-0.1774	No
97	Spsb1	11543	-0.140	-0.1812	No
98	Dnajb4	11544	-0.140	-0.1776	No
99	Nfkb2	11643	-0.145	-0.1798	No
100	Ppp1r15a	11646	-0.145	-0.1762	No
101	Icosl	11743	-0.150	-0.1782	No
102	Fosb	11746	-0.150	-0.1744	No
103	Tank	11910	-0.157	-0.1802	No
104	Tgif1	11974	-0.160	-0.1800	No
105	Fos	12081	-0.165	-0.1821	No
106	Btg1	12254	-0.174	-0.1881	No
107	Tnf	12309	-0.177	-0.1868	No
108	Tnip1	12367	-0.180	-0.1856	No
109	Vegfa	12373	-0.180	-0.1813	No
110	Yrdc	12438	-0.184	-0.1805	No
111	Icam1	12733	-0.198	-0.1932	No
112	Tnfrsf9	12796	-0.202	-0.1918	No
113	Eif1	12929	-0.211	-0.1943	No
114	Dusp1	12980	-0.214	-0.1919	No
115	Il18	13198	-0.225	-0.1992	No
116	Ifih1	13299	-0.233	-0.1993	No
117	Il6	13324	-0.234	-0.1948	No
118	Rigi	13381	-0.238	-0.1921	No
119	Kdm6b	13417	-0.240	-0.1880	No
120	Cebpb	13495	-0.245	-0.1864	No
121	Ripk2	13995	-0.278	-0.2095	Yes
122	Il7r	14039	-0.281	-0.2049	Yes
123	Trip10	14054	-0.283	-0.1985	Yes
124	Tsc22d1	14128	-0.289	-0.1955	Yes
125	Cdkn1a	14130	-0.289	-0.1881	Yes
126	Klf10	14254	-0.300	-0.1879	Yes
127	Irs2	14482	-0.315	-0.1936	Yes
128	Slc16a6	14600	-0.324	-0.1923	Yes
129	Trib1	14641	-0.327	-0.1864	Yes
130	Plek	14657	-0.328	-0.1789	Yes
131	Map3k8	14733	-0.335	-0.1748	Yes
132	Btg3	14834	-0.346	-0.1720	Yes
133	Tiparp	14846	-0.347	-0.1638	Yes
134	Nfe2l2	15082	-0.371	-0.1685	Yes
135	Ier5	15235	-0.388	-0.1677	Yes
136	Ptgs2	15321	-0.400	-0.1626	Yes
137	Jag1	15380	-0.407	-0.1557	Yes
138	Nfkbie	15397	-0.409	-0.1462	Yes
139	Rhob	15542	-0.427	-0.1440	Yes
140	Nfil3	15778	-0.458	-0.1465	Yes
141	Fosl2	16005	-0.500	-0.1473	Yes
142	Nr4a1	16008	-0.501	-0.1346	Yes
143	Abca1	16032	-0.507	-0.1230	Yes
144	Ets2	16089	-0.515	-0.1132	Yes
145	Csf1	16198	-0.541	-0.1059	Yes
146	Gpr183	16286	-0.571	-0.0965	Yes
147	Ninj1	16410	-0.618	-0.0881	Yes
148	Ccrl2	16421	-0.625	-0.0727	Yes
149	Ehd1	16632	-0.819	-0.0645	Yes
150	Cebpd	16634	-0.824	-0.0434	Yes
151	Klf9	16667	-0.911	-0.0220	Yes
152	Junb	16673	-0.933	0.0016	Yes