DatasetBasophil.Basophil_Pheno.cls
#Group3_versus_Group4.Basophil_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_HEDGEHOG_SIGNALING
Enrichment Score (ES)0.2638055
Normalized Enrichment Score (NES)0.87674665
Nominal p-value0.64102566
FDR q-value0.90540653
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_HEDGEHOG_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ophn13490.6600.0723Yes
2Ptch17170.5530.1284Yes
3Amot11220.4710.1707Yes
4Nrcam16750.4040.1947Yes
5Ache18050.3900.2421Yes
6Nrp122480.3410.2638Yes
7Ldb129350.2840.2628No
8Nf137770.2330.2453No
9Celsr149630.1630.1972No
10Rtn158250.1170.1621No
11Rasa161510.1010.1569No
12Unc5c67730.0710.1296No
13Pml68150.0690.1369No
14Myh977900.0250.0819No
15Cdk69482-0.045-0.0131No
16Dpysl29505-0.046-0.0078No
17Nrp29665-0.053-0.0099No
18Adgrg19877-0.064-0.0135No
19Slit110006-0.069-0.0115No
20Vldlr10252-0.080-0.0149No
21Vegfa12373-0.180-0.1166No
22Tle113019-0.215-0.1249No
23L1cam13286-0.232-0.1080No
24Thy113865-0.268-0.1048No
25Tle314612-0.325-0.1037No
26Plg15849-0.470-0.1113No
27Ets216089-0.515-0.0529No
28Cdk5r116435-0.6330.0158No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_HEDGEHOG_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_HEDGEHOG_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_HEDGEHOG_SIGNALING