| Dataset | Basophil.Basophil_Pheno.cls #Group3_versus_Group4.Basophil_Pheno.cls #Group3_versus_Group4_repos |
| Phenotype | Basophil_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_E2F_TARGETS |
| Enrichment Score (ES) | 0.342313 |
| Normalized Enrichment Score (NES) | 1.1689018 |
| Nominal p-value | 0.30645162 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.967 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Bub1b | 214 | 0.749 | 0.0053 | Yes |
| 2 | Espl1 | 510 | 0.602 | 0.0022 | Yes |
| 3 | Nop56 | 596 | 0.578 | 0.0112 | Yes |
| 4 | Trip13 | 639 | 0.570 | 0.0225 | Yes |
| 5 | Rad51c | 666 | 0.565 | 0.0348 | Yes |
| 6 | H2ax | 676 | 0.561 | 0.0479 | Yes |
| 7 | Depdc1a | 874 | 0.519 | 0.0487 | Yes |
| 8 | Wdr90 | 1042 | 0.482 | 0.0503 | Yes |
| 9 | Bard1 | 1053 | 0.479 | 0.0614 | Yes |
| 10 | Hmgb3 | 1064 | 0.478 | 0.0725 | Yes |
| 11 | Aurka | 1256 | 0.452 | 0.0720 | Yes |
| 12 | Tubb5 | 1267 | 0.451 | 0.0824 | Yes |
| 13 | Lyar | 1301 | 0.445 | 0.0912 | Yes |
| 14 | Tra2b | 1331 | 0.442 | 0.1003 | Yes |
| 15 | Xpo1 | 1373 | 0.438 | 0.1085 | Yes |
| 16 | Nup205 | 1388 | 0.437 | 0.1183 | Yes |
| 17 | Cenpm | 1508 | 0.422 | 0.1214 | Yes |
| 18 | Top2a | 1574 | 0.416 | 0.1276 | Yes |
| 19 | Ube2s | 1587 | 0.415 | 0.1370 | Yes |
| 20 | Mad2l1 | 1593 | 0.413 | 0.1468 | Yes |
| 21 | Racgap1 | 1636 | 0.408 | 0.1543 | Yes |
| 22 | Ccp110 | 1715 | 0.399 | 0.1593 | Yes |
| 23 | Snrpb | 1994 | 0.370 | 0.1515 | Yes |
| 24 | Spc24 | 2057 | 0.362 | 0.1566 | Yes |
| 25 | Ipo7 | 2065 | 0.361 | 0.1650 | Yes |
| 26 | Mki67 | 2071 | 0.360 | 0.1735 | Yes |
| 27 | Birc5 | 2090 | 0.358 | 0.1811 | Yes |
| 28 | Shmt1 | 2142 | 0.353 | 0.1866 | Yes |
| 29 | Melk | 2170 | 0.349 | 0.1935 | Yes |
| 30 | Ncapd2 | 2313 | 0.337 | 0.1932 | Yes |
| 31 | Rfc3 | 2315 | 0.337 | 0.2013 | Yes |
| 32 | Dck | 2539 | 0.316 | 0.1955 | Yes |
| 33 | Kif4 | 2754 | 0.300 | 0.1899 | Yes |
| 34 | Rfc1 | 2789 | 0.296 | 0.1951 | Yes |
| 35 | Tmpo | 2822 | 0.293 | 0.2003 | Yes |
| 36 | Spc25 | 2857 | 0.291 | 0.2053 | Yes |
| 37 | Rnaseh2a | 2878 | 0.289 | 0.2112 | Yes |
| 38 | Mcm5 | 2903 | 0.288 | 0.2167 | Yes |
| 39 | Pan2 | 2921 | 0.286 | 0.2227 | Yes |
| 40 | Cdkn2c | 2940 | 0.283 | 0.2285 | Yes |
| 41 | Diaph3 | 2961 | 0.280 | 0.2342 | Yes |
| 42 | Spag5 | 2980 | 0.279 | 0.2399 | Yes |
| 43 | Ung | 2996 | 0.278 | 0.2458 | Yes |
| 44 | Cit | 3098 | 0.270 | 0.2462 | Yes |
| 45 | Paics | 3231 | 0.263 | 0.2447 | Yes |
| 46 | Cdca8 | 3365 | 0.255 | 0.2428 | Yes |
| 47 | Brca2 | 3388 | 0.253 | 0.2477 | Yes |
| 48 | Nap1l1 | 3408 | 0.252 | 0.2527 | Yes |
| 49 | Pold3 | 3427 | 0.251 | 0.2577 | Yes |
| 50 | Tk1 | 3432 | 0.251 | 0.2636 | Yes |
| 51 | Cse1l | 3441 | 0.250 | 0.2692 | Yes |
| 52 | Gins1 | 3548 | 0.246 | 0.2688 | Yes |
| 53 | Ubr7 | 3570 | 0.245 | 0.2735 | Yes |
| 54 | Tbrg4 | 3650 | 0.239 | 0.2746 | Yes |
| 55 | Ppp1r8 | 3710 | 0.238 | 0.2768 | Yes |
| 56 | Kif18b | 3712 | 0.237 | 0.2826 | Yes |
| 57 | Lmnb1 | 3719 | 0.237 | 0.2880 | Yes |
| 58 | Chek2 | 3745 | 0.235 | 0.2922 | Yes |
| 59 | Cdkn3 | 3756 | 0.235 | 0.2974 | Yes |
| 60 | Exosc8 | 3904 | 0.225 | 0.2940 | Yes |
| 61 | Cdc25b | 3987 | 0.220 | 0.2944 | Yes |
| 62 | Tcf19 | 3991 | 0.220 | 0.2996 | Yes |
| 63 | Psip1 | 4021 | 0.218 | 0.3031 | Yes |
| 64 | Cdca3 | 4066 | 0.214 | 0.3057 | Yes |
| 65 | Nup107 | 4200 | 0.204 | 0.3026 | Yes |
| 66 | Cdk1 | 4211 | 0.204 | 0.3070 | Yes |
| 67 | Cdc20 | 4242 | 0.202 | 0.3101 | Yes |
| 68 | Rad21 | 4333 | 0.199 | 0.3095 | Yes |
| 69 | Slbp | 4354 | 0.197 | 0.3131 | Yes |
| 70 | Cenpe | 4444 | 0.193 | 0.3125 | Yes |
| 71 | Hmmr | 4464 | 0.192 | 0.3160 | Yes |
| 72 | Ing3 | 4502 | 0.189 | 0.3184 | Yes |
| 73 | Plk4 | 4505 | 0.189 | 0.3229 | Yes |
| 74 | Lsm8 | 4549 | 0.186 | 0.3248 | Yes |
| 75 | Nbn | 4722 | 0.175 | 0.3186 | Yes |
| 76 | Timeless | 4750 | 0.173 | 0.3212 | Yes |
| 77 | Ezh2 | 4782 | 0.172 | 0.3236 | Yes |
| 78 | Ddx39a | 4888 | 0.166 | 0.3213 | Yes |
| 79 | Plk1 | 4904 | 0.166 | 0.3244 | Yes |
| 80 | Tipin | 4976 | 0.162 | 0.3241 | Yes |
| 81 | Mcm6 | 4984 | 0.162 | 0.3276 | Yes |
| 82 | Cbx5 | 5005 | 0.161 | 0.3303 | Yes |
| 83 | Jpt1 | 5151 | 0.152 | 0.3252 | Yes |
| 84 | Kif22 | 5168 | 0.151 | 0.3280 | Yes |
| 85 | Brms1l | 5171 | 0.151 | 0.3315 | Yes |
| 86 | Pole | 5221 | 0.148 | 0.3322 | Yes |
| 87 | Ilf3 | 5226 | 0.148 | 0.3356 | Yes |
| 88 | Mybl2 | 5232 | 0.148 | 0.3389 | Yes |
| 89 | Smc4 | 5378 | 0.140 | 0.3335 | Yes |
| 90 | E2f8 | 5390 | 0.140 | 0.3363 | Yes |
| 91 | Ak2 | 5391 | 0.140 | 0.3397 | Yes |
| 92 | Gins3 | 5405 | 0.139 | 0.3423 | Yes |
| 93 | Rad1 | 5514 | 0.134 | 0.3390 | No |
| 94 | Rad51ap1 | 5580 | 0.130 | 0.3383 | No |
| 95 | Gspt1 | 5591 | 0.130 | 0.3408 | No |
| 96 | Nasp | 5663 | 0.126 | 0.3396 | No |
| 97 | Dclre1b | 5712 | 0.123 | 0.3397 | No |
| 98 | Mcm3 | 5853 | 0.116 | 0.3341 | No |
| 99 | Tacc3 | 5857 | 0.116 | 0.3367 | No |
| 100 | Cdkn1b | 5878 | 0.115 | 0.3383 | No |
| 101 | Eed | 5965 | 0.111 | 0.3358 | No |
| 102 | Hnrnpd | 5983 | 0.110 | 0.3375 | No |
| 103 | Ctcf | 6040 | 0.106 | 0.3367 | No |
| 104 | Kif2c | 6171 | 0.100 | 0.3312 | No |
| 105 | Asf1b | 6209 | 0.098 | 0.3314 | No |
| 106 | Aurkb | 6218 | 0.097 | 0.3333 | No |
| 107 | Srsf2 | 6219 | 0.097 | 0.3357 | No |
| 108 | Mxd3 | 6356 | 0.091 | 0.3296 | No |
| 109 | Rrm2 | 6708 | 0.073 | 0.3102 | No |
| 110 | Stmn1 | 6920 | 0.064 | 0.2989 | No |
| 111 | Mre11a | 6988 | 0.061 | 0.2964 | No |
| 112 | Anp32e | 7073 | 0.057 | 0.2927 | No |
| 113 | Pop7 | 7095 | 0.056 | 0.2928 | No |
| 114 | Hmga1b | 7206 | 0.051 | 0.2874 | No |
| 115 | Prim2 | 7216 | 0.051 | 0.2881 | No |
| 116 | Mcm2 | 7238 | 0.050 | 0.2880 | No |
| 117 | Smc3 | 7294 | 0.047 | 0.2858 | No |
| 118 | Rbbp7 | 7370 | 0.044 | 0.2824 | No |
| 119 | Lbr | 7435 | 0.041 | 0.2795 | No |
| 120 | Syncrip | 7484 | 0.039 | 0.2775 | No |
| 121 | Pa2g4 | 7565 | 0.035 | 0.2735 | No |
| 122 | Smc1a | 7712 | 0.029 | 0.2654 | No |
| 123 | Mlh1 | 7797 | 0.024 | 0.2609 | No |
| 124 | Srsf1 | 7868 | 0.022 | 0.2572 | No |
| 125 | Myc | 7908 | 0.020 | 0.2553 | No |
| 126 | Dlgap5 | 7949 | 0.018 | 0.2534 | No |
| 127 | Stag1 | 7957 | 0.018 | 0.2534 | No |
| 128 | Orc6 | 7970 | 0.017 | 0.2531 | No |
| 129 | Zw10 | 8060 | 0.014 | 0.2480 | No |
| 130 | Ran | 8249 | 0.005 | 0.2367 | No |
| 131 | Mthfd2 | 8342 | 0.001 | 0.2312 | No |
| 132 | Brca1 | 8474 | -0.001 | 0.2233 | No |
| 133 | Pttg1 | 8644 | -0.009 | 0.2133 | No |
| 134 | Prkdc | 8781 | -0.015 | 0.2054 | No |
| 135 | Ube2t | 8988 | -0.023 | 0.1935 | No |
| 136 | Phf5a | 9005 | -0.024 | 0.1931 | No |
| 137 | Pcna | 9023 | -0.024 | 0.1926 | No |
| 138 | Hmgb2 | 9072 | -0.026 | 0.1904 | No |
| 139 | Ranbp1 | 9135 | -0.029 | 0.1873 | No |
| 140 | Nup153 | 9195 | -0.031 | 0.1845 | No |
| 141 | Dek | 9204 | -0.032 | 0.1848 | No |
| 142 | Nudt21 | 9205 | -0.032 | 0.1856 | No |
| 143 | Ccnb2 | 9237 | -0.033 | 0.1845 | No |
| 144 | Rfc2 | 9299 | -0.037 | 0.1817 | No |
| 145 | Hells | 9335 | -0.039 | 0.1805 | No |
| 146 | Dnmt1 | 9370 | -0.041 | 0.1795 | No |
| 147 | Mcm4 | 9389 | -0.042 | 0.1794 | No |
| 148 | Pnn | 9471 | -0.045 | 0.1756 | No |
| 149 | Cdk4 | 9612 | -0.051 | 0.1683 | No |
| 150 | Pds5b | 9627 | -0.051 | 0.1687 | No |
| 151 | Cnot9 | 9743 | -0.057 | 0.1632 | No |
| 152 | Cks2 | 9849 | -0.062 | 0.1583 | No |
| 153 | Usp1 | 10024 | -0.070 | 0.1495 | No |
| 154 | Pold2 | 10057 | -0.071 | 0.1493 | No |
| 155 | Msh2 | 10158 | -0.076 | 0.1451 | No |
| 156 | Wee1 | 10365 | -0.086 | 0.1347 | No |
| 157 | Rpa1 | 10455 | -0.090 | 0.1315 | No |
| 158 | Dut | 10481 | -0.091 | 0.1322 | No |
| 159 | Xrcc6 | 10497 | -0.092 | 0.1335 | No |
| 160 | Ssrp1 | 10662 | -0.100 | 0.1260 | No |
| 161 | Prps1 | 10677 | -0.100 | 0.1276 | No |
| 162 | Asf1a | 10770 | -0.104 | 0.1246 | No |
| 163 | Luc7l3 | 11004 | -0.115 | 0.1133 | No |
| 164 | Pms2 | 11071 | -0.118 | 0.1122 | No |
| 165 | Mms22l | 11087 | -0.119 | 0.1142 | No |
| 166 | Pola2 | 11286 | -0.129 | 0.1053 | No |
| 167 | Rad50 | 11607 | -0.143 | 0.0894 | No |
| 168 | Atad2 | 11689 | -0.148 | 0.0881 | No |
| 169 | Cks1b | 11732 | -0.150 | 0.0892 | No |
| 170 | Trp53 | 11756 | -0.151 | 0.0915 | No |
| 171 | Cdc25a | 11832 | -0.154 | 0.0907 | No |
| 172 | Ccne1 | 11841 | -0.155 | 0.0940 | No |
| 173 | Rpa2 | 12080 | -0.165 | 0.0837 | No |
| 174 | Chek1 | 12586 | -0.190 | 0.0577 | No |
| 175 | Lig1 | 12662 | -0.194 | 0.0579 | No |
| 176 | Pold1 | 12672 | -0.195 | 0.0621 | No |
| 177 | Rpa3 | 12683 | -0.195 | 0.0663 | No |
| 178 | Smc6 | 12884 | -0.208 | 0.0592 | No |
| 179 | Hus1 | 12971 | -0.213 | 0.0592 | No |
| 180 | Mcm7 | 13237 | -0.229 | 0.0487 | No |
| 181 | Nolc1 | 13281 | -0.232 | 0.0518 | No |
| 182 | Dscc1 | 13368 | -0.237 | 0.0524 | No |
| 183 | Eif2s1 | 13606 | -0.251 | 0.0441 | No |
| 184 | Gins4 | 13820 | -0.265 | 0.0377 | No |
| 185 | Suv39h1 | 14042 | -0.281 | 0.0312 | No |
| 186 | Cdkn1a | 14130 | -0.289 | 0.0330 | No |
| 187 | Orc2 | 14168 | -0.293 | 0.0379 | No |
| 188 | Prdx4 | 14447 | -0.311 | 0.0287 | No |
| 189 | Cdkn2a | 14561 | -0.322 | 0.0297 | No |
| 190 | Tubg1 | 14597 | -0.324 | 0.0355 | No |
| 191 | Psmc3ip | 14961 | -0.360 | 0.0223 | No |
| 192 | Dctpp1 | 14966 | -0.360 | 0.0308 | No |
| 193 | Pole4 | 15061 | -0.369 | 0.0341 | No |
| 194 | H2az1 | 15582 | -0.433 | 0.0132 | No |
| 195 | Donson | 15686 | -0.448 | 0.0179 | No |
| 196 | Tfrc | 16139 | -0.524 | 0.0033 | No |
| 197 | Nme1 | 16180 | -0.537 | 0.0140 | No |
| 198 | Ppm1d | 16547 | -0.711 | 0.0092 | No |

