DatasetBasophil.Basophil_Pheno.cls
#Group3_versus_Group4.Basophil_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class2
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.342313
Normalized Enrichment Score (NES)1.1689018
Nominal p-value0.30645162
FDR q-value1.0
FWER p-Value0.967
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Bub1b2140.7490.0053Yes
2Espl15100.6020.0022Yes
3Nop565960.5780.0112Yes
4Trip136390.5700.0225Yes
5Rad51c6660.5650.0348Yes
6H2ax6760.5610.0479Yes
7Depdc1a8740.5190.0487Yes
8Wdr9010420.4820.0503Yes
9Bard110530.4790.0614Yes
10Hmgb310640.4780.0725Yes
11Aurka12560.4520.0720Yes
12Tubb512670.4510.0824Yes
13Lyar13010.4450.0912Yes
14Tra2b13310.4420.1003Yes
15Xpo113730.4380.1085Yes
16Nup20513880.4370.1183Yes
17Cenpm15080.4220.1214Yes
18Top2a15740.4160.1276Yes
19Ube2s15870.4150.1370Yes
20Mad2l115930.4130.1468Yes
21Racgap116360.4080.1543Yes
22Ccp11017150.3990.1593Yes
23Snrpb19940.3700.1515Yes
24Spc2420570.3620.1566Yes
25Ipo720650.3610.1650Yes
26Mki6720710.3600.1735Yes
27Birc520900.3580.1811Yes
28Shmt121420.3530.1866Yes
29Melk21700.3490.1935Yes
30Ncapd223130.3370.1932Yes
31Rfc323150.3370.2013Yes
32Dck25390.3160.1955Yes
33Kif427540.3000.1899Yes
34Rfc127890.2960.1951Yes
35Tmpo28220.2930.2003Yes
36Spc2528570.2910.2053Yes
37Rnaseh2a28780.2890.2112Yes
38Mcm529030.2880.2167Yes
39Pan229210.2860.2227Yes
40Cdkn2c29400.2830.2285Yes
41Diaph329610.2800.2342Yes
42Spag529800.2790.2399Yes
43Ung29960.2780.2458Yes
44Cit30980.2700.2462Yes
45Paics32310.2630.2447Yes
46Cdca833650.2550.2428Yes
47Brca233880.2530.2477Yes
48Nap1l134080.2520.2527Yes
49Pold334270.2510.2577Yes
50Tk134320.2510.2636Yes
51Cse1l34410.2500.2692Yes
52Gins135480.2460.2688Yes
53Ubr735700.2450.2735Yes
54Tbrg436500.2390.2746Yes
55Ppp1r837100.2380.2768Yes
56Kif18b37120.2370.2826Yes
57Lmnb137190.2370.2880Yes
58Chek237450.2350.2922Yes
59Cdkn337560.2350.2974Yes
60Exosc839040.2250.2940Yes
61Cdc25b39870.2200.2944Yes
62Tcf1939910.2200.2996Yes
63Psip140210.2180.3031Yes
64Cdca340660.2140.3057Yes
65Nup10742000.2040.3026Yes
66Cdk142110.2040.3070Yes
67Cdc2042420.2020.3101Yes
68Rad2143330.1990.3095Yes
69Slbp43540.1970.3131Yes
70Cenpe44440.1930.3125Yes
71Hmmr44640.1920.3160Yes
72Ing345020.1890.3184Yes
73Plk445050.1890.3229Yes
74Lsm845490.1860.3248Yes
75Nbn47220.1750.3186Yes
76Timeless47500.1730.3212Yes
77Ezh247820.1720.3236Yes
78Ddx39a48880.1660.3213Yes
79Plk149040.1660.3244Yes
80Tipin49760.1620.3241Yes
81Mcm649840.1620.3276Yes
82Cbx550050.1610.3303Yes
83Jpt151510.1520.3252Yes
84Kif2251680.1510.3280Yes
85Brms1l51710.1510.3315Yes
86Pole52210.1480.3322Yes
87Ilf352260.1480.3356Yes
88Mybl252320.1480.3389Yes
89Smc453780.1400.3335Yes
90E2f853900.1400.3363Yes
91Ak253910.1400.3397Yes
92Gins354050.1390.3423Yes
93Rad155140.1340.3390No
94Rad51ap155800.1300.3383No
95Gspt155910.1300.3408No
96Nasp56630.1260.3396No
97Dclre1b57120.1230.3397No
98Mcm358530.1160.3341No
99Tacc358570.1160.3367No
100Cdkn1b58780.1150.3383No
101Eed59650.1110.3358No
102Hnrnpd59830.1100.3375No
103Ctcf60400.1060.3367No
104Kif2c61710.1000.3312No
105Asf1b62090.0980.3314No
106Aurkb62180.0970.3333No
107Srsf262190.0970.3357No
108Mxd363560.0910.3296No
109Rrm267080.0730.3102No
110Stmn169200.0640.2989No
111Mre11a69880.0610.2964No
112Anp32e70730.0570.2927No
113Pop770950.0560.2928No
114Hmga1b72060.0510.2874No
115Prim272160.0510.2881No
116Mcm272380.0500.2880No
117Smc372940.0470.2858No
118Rbbp773700.0440.2824No
119Lbr74350.0410.2795No
120Syncrip74840.0390.2775No
121Pa2g475650.0350.2735No
122Smc1a77120.0290.2654No
123Mlh177970.0240.2609No
124Srsf178680.0220.2572No
125Myc79080.0200.2553No
126Dlgap579490.0180.2534No
127Stag179570.0180.2534No
128Orc679700.0170.2531No
129Zw1080600.0140.2480No
130Ran82490.0050.2367No
131Mthfd283420.0010.2312No
132Brca18474-0.0010.2233No
133Pttg18644-0.0090.2133No
134Prkdc8781-0.0150.2054No
135Ube2t8988-0.0230.1935No
136Phf5a9005-0.0240.1931No
137Pcna9023-0.0240.1926No
138Hmgb29072-0.0260.1904No
139Ranbp19135-0.0290.1873No
140Nup1539195-0.0310.1845No
141Dek9204-0.0320.1848No
142Nudt219205-0.0320.1856No
143Ccnb29237-0.0330.1845No
144Rfc29299-0.0370.1817No
145Hells9335-0.0390.1805No
146Dnmt19370-0.0410.1795No
147Mcm49389-0.0420.1794No
148Pnn9471-0.0450.1756No
149Cdk49612-0.0510.1683No
150Pds5b9627-0.0510.1687No
151Cnot99743-0.0570.1632No
152Cks29849-0.0620.1583No
153Usp110024-0.0700.1495No
154Pold210057-0.0710.1493No
155Msh210158-0.0760.1451No
156Wee110365-0.0860.1347No
157Rpa110455-0.0900.1315No
158Dut10481-0.0910.1322No
159Xrcc610497-0.0920.1335No
160Ssrp110662-0.1000.1260No
161Prps110677-0.1000.1276No
162Asf1a10770-0.1040.1246No
163Luc7l311004-0.1150.1133No
164Pms211071-0.1180.1122No
165Mms22l11087-0.1190.1142No
166Pola211286-0.1290.1053No
167Rad5011607-0.1430.0894No
168Atad211689-0.1480.0881No
169Cks1b11732-0.1500.0892No
170Trp5311756-0.1510.0915No
171Cdc25a11832-0.1540.0907No
172Ccne111841-0.1550.0940No
173Rpa212080-0.1650.0837No
174Chek112586-0.1900.0577No
175Lig112662-0.1940.0579No
176Pold112672-0.1950.0621No
177Rpa312683-0.1950.0663No
178Smc612884-0.2080.0592No
179Hus112971-0.2130.0592No
180Mcm713237-0.2290.0487No
181Nolc113281-0.2320.0518No
182Dscc113368-0.2370.0524No
183Eif2s113606-0.2510.0441No
184Gins413820-0.2650.0377No
185Suv39h114042-0.2810.0312No
186Cdkn1a14130-0.2890.0330No
187Orc214168-0.2930.0379No
188Prdx414447-0.3110.0287No
189Cdkn2a14561-0.3220.0297No
190Tubg114597-0.3240.0355No
191Psmc3ip14961-0.3600.0223No
192Dctpp114966-0.3600.0308No
193Pole415061-0.3690.0341No
194H2az115582-0.4330.0132No
195Donson15686-0.4480.0179No
196Tfrc16139-0.5240.0033No
197Nme116180-0.5370.0140No
198Ppm1d16547-0.7110.0092No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS