Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group3_versus_Group4.Basophil_Pheno.cls #Group3_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.24011965
Normalized Enrichment Score (NES)	-1.0467508
Nominal p-value	0.4050633
FDR q-value	0.7729753
FWER p-Value	0.99

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Timp3	108	0.859	0.0220	No
2	Ccnd1	143	0.811	0.0469	No
3	Cd44	528	0.595	0.0435	No
4	F2r	615	0.574	0.0574	No
5	Casp9	626	0.573	0.0758	No
6	Lmna	968	0.497	0.0717	No
7	Mcl1	1059	0.478	0.0822	No
8	Bgn	1106	0.472	0.0951	No
9	Tnfsf10	1127	0.470	0.1095	No
10	Diablo	1399	0.435	0.1076	No
11	Top2a	1574	0.416	0.1109	No
12	Ppp3r1	1586	0.415	0.1240	No
13	Tap1	1807	0.390	0.1237	No
14	Retsat	1995	0.370	0.1247	No
15	Etf1	2268	0.340	0.1196	No
16	Pdgfrb	2352	0.334	0.1256	No
17	Cth	2737	0.301	0.1124	No
18	Bax	2985	0.278	0.1068	No
19	Bcl2l11	3285	0.260	0.0974	No
20	Sat1	3359	0.256	0.1015	No
21	Lef1	3417	0.252	0.1064	No
22	Vdac2	3635	0.240	0.1013	No
23	Bcap31	3661	0.239	0.1077	No
24	Gna15	3674	0.238	0.1149	No
25	Ier3	3969	0.222	0.1045	No
26	Cdc25b	3987	0.220	0.1108	No
27	Fas	4170	0.207	0.1067	No
28	Dap3	4426	0.194	0.0977	No
29	Irf1	4430	0.193	0.1039	No
30	Ifngr1	4476	0.191	0.1076	No
31	Nefh	4969	0.162	0.0832	No
32	Bik	4994	0.162	0.0872	No
33	Psen1	5009	0.161	0.0917	No
34	Hmox1	5170	0.151	0.0870	No
35	Mgmt	5190	0.149	0.0908	No
36	Jun	5219	0.149	0.0941	No
37	Dpyd	5242	0.148	0.0976	No
38	Sptan1	5368	0.141	0.0948	No
39	Pmaip1	5650	0.127	0.0820	No
40	Gpx1	5696	0.124	0.0834	No
41	Cdkn1b	5878	0.115	0.0763	No
42	Gadd45b	6234	0.097	0.0581	No
43	App	6902	0.065	0.0200	No
44	Sc5d	7177	0.053	0.0052	No
45	Bid	7326	0.046	-0.0022	No
46	Cflar	7341	0.045	-0.0015	No
47	Ctnnb1	7505	0.038	-0.0101	No
48	Casp7	7553	0.036	-0.0118	No
49	Ebp	7773	0.026	-0.0241	No
50	Ccnd2	7879	0.022	-0.0297	No
51	Bcl2l1	7916	0.020	-0.0312	No
52	Sqstm1	7958	0.018	-0.0331	No
53	Slc20a1	7996	0.016	-0.0348	No
54	Rhot2	7997	0.016	-0.0343	No
55	Dap	8018	0.015	-0.0350	No
56	Sod2	8094	0.012	-0.0391	No
57	Birc3	8112	0.011	-0.0398	No
58	Tgfb2	8138	0.010	-0.0410	No
59	Gch1	8142	0.010	-0.0408	No
60	Casp2	8145	0.010	-0.0406	No
61	Mmp2	8349	0.001	-0.0528	No
62	Brca1	8474	-0.001	-0.0603	No
63	Btg2	8599	-0.007	-0.0675	No
64	Xiap	8904	-0.020	-0.0852	No
65	Ppt1	9069	-0.026	-0.0943	No
66	Hmgb2	9072	-0.026	-0.0935	No
67	Rnasel	9086	-0.027	-0.0934	No
68	Bnip3l	9328	-0.039	-0.1067	No
69	Ank	9403	-0.042	-0.1098	No
70	Pdcd4	9436	-0.044	-0.1102	No
71	Crebbp	9859	-0.062	-0.1336	No
72	Dnm1l	9862	-0.062	-0.1317	No
73	Gadd45a	9869	-0.063	-0.1300	No
74	Cd69	9937	-0.066	-0.1318	No
75	Casp8	9973	-0.068	-0.1317	No
76	Rela	10166	-0.077	-0.1407	No
77	Wee1	10365	-0.086	-0.1498	No
78	Ddit3	10376	-0.086	-0.1476	No
79	Casp3	10794	-0.106	-0.1692	No
80	Tgfbr3	10818	-0.106	-0.1671	No
81	Bcl2l2	10945	-0.113	-0.1710	No
82	Psen2	11146	-0.122	-0.1790	No
83	Madd	11178	-0.123	-0.1768	No
84	Rock1	11195	-0.124	-0.1736	No
85	Cyld	11473	-0.137	-0.1858	No
86	Smad7	11667	-0.147	-0.1926	No
87	Isg20	11714	-0.149	-0.1904	No
88	H1f0	11720	-0.149	-0.1858	No
89	Ppp2r5b	11840	-0.155	-0.1878	No
90	Tnf	12309	-0.177	-0.2102	No
91	Gpx3	12453	-0.185	-0.2127	No
92	Add1	12489	-0.187	-0.2086	No
93	Dnaja1	13012	-0.215	-0.2330	Yes
94	Fdxr	13024	-0.216	-0.2265	Yes
95	Lgals3	13067	-0.219	-0.2218	Yes
96	Timp2	13172	-0.224	-0.2206	Yes
97	Il18	13198	-0.225	-0.2146	Yes
98	Il6	13324	-0.234	-0.2144	Yes
99	Pak1	13360	-0.237	-0.2087	Yes
100	Gucy2e	13400	-0.240	-0.2031	Yes
101	Txnip	13475	-0.243	-0.1994	Yes
102	Igf2r	13512	-0.246	-0.1934	Yes
103	Rara	13616	-0.251	-0.1913	Yes
104	Plcb2	13687	-0.256	-0.1870	Yes
105	Cd38	13709	-0.258	-0.1797	Yes
106	Tspo	13796	-0.263	-0.1762	Yes
107	Gsr	13808	-0.264	-0.1681	Yes
108	Erbb3	13842	-0.266	-0.1612	Yes
109	Cav1	13853	-0.267	-0.1529	Yes
110	Casp1	13860	-0.268	-0.1444	Yes
111	Casp4	13931	-0.273	-0.1396	Yes
112	Anxa1	13994	-0.278	-0.1341	Yes
113	Cdkn1a	14130	-0.289	-0.1327	Yes
114	Bcl10	14171	-0.293	-0.1254	Yes
115	Casp6	14320	-0.304	-0.1242	Yes
116	Cdk2	14385	-0.308	-0.1178	Yes
117	Gpx4	14387	-0.308	-0.1076	Yes
118	Tnfrsf12a	14410	-0.309	-0.0987	Yes
119	Dnajc3	14671	-0.329	-0.1035	Yes
120	Btg3	14834	-0.346	-0.1018	Yes
121	Pea15a	14906	-0.354	-0.0943	Yes
122	Aifm3	14950	-0.359	-0.0850	Yes
123	Krt18	15032	-0.367	-0.0777	Yes
124	Ptk2	15068	-0.370	-0.0675	Yes
125	Gsn	15205	-0.383	-0.0630	Yes
126	Rhob	15542	-0.427	-0.0691	Yes
127	Sod1	15543	-0.427	-0.0549	Yes
128	Dffa	15962	-0.491	-0.0638	Yes
129	Nedd9	16053	-0.511	-0.0523	Yes
130	Satb1	16328	-0.587	-0.0493	Yes
131	Hgf	16506	-0.675	-0.0376	Yes
132	Bmf	16543	-0.708	-0.0162	Yes
133	Ifitm3	16599	-0.771	0.0060	Yes