DatasetBasophil.Basophil_Pheno.cls
#Group2_versus_Group4.Basophil_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)0.34414992
Normalized Enrichment Score (NES)1.4415873
Nominal p-value0.03373016
FDR q-value1.0
FWER p-Value0.561
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Tjp12230.6940.0504Yes
2Smurf12750.6640.1085Yes
3Acvr13920.6120.1579Yes
4Wwtr16590.5370.1913Yes
5Hdac19540.4790.2177Yes
6Ppm1a9740.4770.2604Yes
7Sptbn117140.3850.2514Yes
8Ppp1r15a20280.3570.2655Yes
9Rab3121050.3490.2930Yes
10Smad625020.3130.2980Yes
11Ski25610.3080.3229Yes
12Smad126680.3000.3441Yes
13Cdk934670.2400.3183No
14Cdkn1c35360.2350.3358No
15Fnta39900.2030.3273No
16Id243890.1780.3197No
17Rhoa47960.1590.3099No
18Thbs151130.1410.3040No
19Id162580.0830.2429No
20Skil65480.0680.2318No
21Slc20a165730.0670.2366No
22Smad365820.0670.2422No
23Map3k767090.0600.2402No
24Ctnnb168990.0490.2334No
25Ube2d374080.0230.2050No
26Trim337947-0.0000.1727No
27Smad78143-0.0080.1617No
28Bcar38631-0.0290.1351No
29Smurf29038-0.0460.1150No
30Ppp1ca9258-0.0550.1069No
31Tgfb19454-0.0640.1011No
32Ifngr29689-0.0750.0939No
33Cdh19722-0.0770.0990No
34Ncor29788-0.0800.1025No
35Xiap9852-0.0820.1063No
36Arid4b10218-0.0980.0934No
37Pmepa110466-0.1110.0888No
38Furin10866-0.1310.0769No
39Hipk211478-0.1590.0549No
40Klf1012074-0.1890.0366No
41Tgfbr112793-0.2310.0147No
42Eng12834-0.2330.0337No
43Tgif113405-0.2680.0241No
44Apc13848-0.2980.0250No
45Bmpr214535-0.3510.0162No
46Fkbp1a15092-0.4010.0197No
47Bmpr1a15112-0.4040.0557No
48Junb15334-0.4300.0820No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING