| Dataset | Basophil.Basophil_Pheno.cls #Group2_versus_Group4.Basophil_Pheno.cls #Group2_versus_Group4_repos |
| Phenotype | Basophil_Pheno.cls#Group2_versus_Group4_repos |
| Upregulated in class | 1 |
| GeneSet | HALLMARK_TGF_BETA_SIGNALING |
| Enrichment Score (ES) | 0.34414992 |
| Normalized Enrichment Score (NES) | 1.4415873 |
| Nominal p-value | 0.03373016 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.561 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Tjp1 | 223 | 0.694 | 0.0504 | Yes |
| 2 | Smurf1 | 275 | 0.664 | 0.1085 | Yes |
| 3 | Acvr1 | 392 | 0.612 | 0.1579 | Yes |
| 4 | Wwtr1 | 659 | 0.537 | 0.1913 | Yes |
| 5 | Hdac1 | 954 | 0.479 | 0.2177 | Yes |
| 6 | Ppm1a | 974 | 0.477 | 0.2604 | Yes |
| 7 | Sptbn1 | 1714 | 0.385 | 0.2514 | Yes |
| 8 | Ppp1r15a | 2028 | 0.357 | 0.2655 | Yes |
| 9 | Rab31 | 2105 | 0.349 | 0.2930 | Yes |
| 10 | Smad6 | 2502 | 0.313 | 0.2980 | Yes |
| 11 | Ski | 2561 | 0.308 | 0.3229 | Yes |
| 12 | Smad1 | 2668 | 0.300 | 0.3441 | Yes |
| 13 | Cdk9 | 3467 | 0.240 | 0.3183 | No |
| 14 | Cdkn1c | 3536 | 0.235 | 0.3358 | No |
| 15 | Fnta | 3990 | 0.203 | 0.3273 | No |
| 16 | Id2 | 4389 | 0.178 | 0.3197 | No |
| 17 | Rhoa | 4796 | 0.159 | 0.3099 | No |
| 18 | Thbs1 | 5113 | 0.141 | 0.3040 | No |
| 19 | Id1 | 6258 | 0.083 | 0.2429 | No |
| 20 | Skil | 6548 | 0.068 | 0.2318 | No |
| 21 | Slc20a1 | 6573 | 0.067 | 0.2366 | No |
| 22 | Smad3 | 6582 | 0.067 | 0.2422 | No |
| 23 | Map3k7 | 6709 | 0.060 | 0.2402 | No |
| 24 | Ctnnb1 | 6899 | 0.049 | 0.2334 | No |
| 25 | Ube2d3 | 7408 | 0.023 | 0.2050 | No |
| 26 | Trim33 | 7947 | -0.000 | 0.1727 | No |
| 27 | Smad7 | 8143 | -0.008 | 0.1617 | No |
| 28 | Bcar3 | 8631 | -0.029 | 0.1351 | No |
| 29 | Smurf2 | 9038 | -0.046 | 0.1150 | No |
| 30 | Ppp1ca | 9258 | -0.055 | 0.1069 | No |
| 31 | Tgfb1 | 9454 | -0.064 | 0.1011 | No |
| 32 | Ifngr2 | 9689 | -0.075 | 0.0939 | No |
| 33 | Cdh1 | 9722 | -0.077 | 0.0990 | No |
| 34 | Ncor2 | 9788 | -0.080 | 0.1025 | No |
| 35 | Xiap | 9852 | -0.082 | 0.1063 | No |
| 36 | Arid4b | 10218 | -0.098 | 0.0934 | No |
| 37 | Pmepa1 | 10466 | -0.111 | 0.0888 | No |
| 38 | Furin | 10866 | -0.131 | 0.0769 | No |
| 39 | Hipk2 | 11478 | -0.159 | 0.0549 | No |
| 40 | Klf10 | 12074 | -0.189 | 0.0366 | No |
| 41 | Tgfbr1 | 12793 | -0.231 | 0.0147 | No |
| 42 | Eng | 12834 | -0.233 | 0.0337 | No |
| 43 | Tgif1 | 13405 | -0.268 | 0.0241 | No |
| 44 | Apc | 13848 | -0.298 | 0.0250 | No |
| 45 | Bmpr2 | 14535 | -0.351 | 0.0162 | No |
| 46 | Fkbp1a | 15092 | -0.401 | 0.0197 | No |
| 47 | Bmpr1a | 15112 | -0.404 | 0.0557 | No |
| 48 | Junb | 15334 | -0.430 | 0.0820 | No |

