Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group2_versus_Group4.Basophil_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.2903415
Normalized Enrichment Score (NES)	1.2328998
Nominal p-value	0.15369262
FDR q-value	0.78157383
FWER p-Value	0.923

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pkia	48	0.927	0.0264	Yes
2	Pcx	60	0.907	0.0544	Yes
3	Hbegf	120	0.779	0.0755	Yes
4	Pfkm	200	0.708	0.0931	Yes
5	Sphk1	257	0.678	0.1112	Yes
6	Actn3	323	0.637	0.1274	Yes
7	Cd36	520	0.570	0.1336	Yes
8	Itgb5	542	0.565	0.1502	Yes
9	Eif4a2	571	0.560	0.1662	Yes
10	Wwtr1	659	0.537	0.1779	Yes
11	Flii	691	0.529	0.1928	Yes
12	Ctf1	840	0.499	0.1996	Yes
13	Sptan1	1019	0.471	0.2038	Yes
14	Myo1c	1053	0.466	0.2165	Yes
15	Slc6a8	1069	0.463	0.2303	Yes
16	Myh9	1271	0.435	0.2319	Yes
17	Bhlhe40	1578	0.399	0.2260	Yes
18	Kifc3	1629	0.393	0.2354	Yes
19	Prnp	1680	0.388	0.2447	Yes
20	Igf1	1860	0.373	0.2457	Yes
21	Tead4	2027	0.357	0.2470	Yes
22	Agl	2244	0.335	0.2445	Yes
23	Pygm	2297	0.331	0.2518	Yes
24	Mapre3	2416	0.321	0.2549	Yes
25	Bag1	2545	0.309	0.2569	Yes
26	Lama2	2604	0.304	0.2631	Yes
27	Actn2	2635	0.303	0.2708	Yes
28	Ache	2669	0.300	0.2783	Yes
29	Myl6b	2742	0.295	0.2833	Yes
30	Plxnb2	2822	0.288	0.2877	Yes
31	Psen2	3029	0.272	0.2838	Yes
32	Eno3	3063	0.269	0.2903	Yes
33	Ocel1	3210	0.258	0.2897	No
34	Bin1	3574	0.232	0.2751	No
35	App	3834	0.214	0.2663	No
36	Ak1	4296	0.183	0.2443	No
37	Sorbs1	4310	0.183	0.2493	No
38	Camk2b	4411	0.176	0.2488	No
39	Kcnh1	4543	0.169	0.2463	No
40	Myh11	4573	0.168	0.2498	No
41	Sirt2	4641	0.167	0.2511	No
42	Fkbp1b	5523	0.121	0.2018	No
43	Mef2a	5609	0.115	0.2003	No
44	Cnn3	5719	0.110	0.1972	No
45	Ablim1	5758	0.108	0.1983	No
46	Tpd52l1	5864	0.102	0.1952	No
47	Itgb1	5988	0.096	0.1908	No
48	Fdps	6063	0.093	0.1893	No
49	Ifrd1	6093	0.091	0.1904	No
50	Tpm3	6407	0.075	0.1739	No
51	Sorbs3	6535	0.069	0.1684	No
52	Gadd45b	7049	0.043	0.1388	No
53	Gaa	7102	0.040	0.1369	No
54	Adcy9	7225	0.033	0.1306	No
55	Svil	7271	0.031	0.1289	No
56	Foxo4	7474	0.020	0.1173	No
57	Rit1	7663	0.011	0.1063	No
58	Gabarapl2	7791	0.005	0.0988	No
59	Col1a1	7888	0.000	0.0930	No
60	Ppfia4	8102	-0.007	0.0804	No
61	Atp6ap1	8133	-0.008	0.0788	No
62	Ryr1	8482	-0.022	0.0585	No
63	Nav2	8511	-0.024	0.0576	No
64	Dmd	8657	-0.030	0.0498	No
65	Dapk2	8747	-0.035	0.0455	No
66	Mef2c	8963	-0.043	0.0339	No
67	Agrn	9014	-0.045	0.0323	No
68	Pdlim7	9197	-0.053	0.0230	No
69	Tgfb1	9454	-0.064	0.0096	No
70	Gsn	9489	-0.066	0.0096	No
71	Ncam1	9514	-0.067	0.0103	No
72	Akt2	9604	-0.071	0.0072	No
73	Hdac5	9614	-0.072	0.0089	No
74	Crat	9726	-0.077	0.0046	No
75	Rb1	9841	-0.082	0.0003	No
76	Cdkn1a	9910	-0.084	-0.0011	No
77	Nqo1	10042	-0.091	-0.0061	No
78	Pick1	10298	-0.102	-0.0183	No
79	Large1	10368	-0.106	-0.0191	No
80	Pde4dip	10758	-0.125	-0.0386	No
81	Fhl1	11076	-0.142	-0.0532	No
82	Syngr2	11181	-0.146	-0.0549	No
83	Dmpk	11189	-0.146	-0.0507	No
84	Schip1	11554	-0.163	-0.0675	No
85	Klf5	11603	-0.167	-0.0651	No
86	Cdh13	11611	-0.167	-0.0602	No
87	Mylpf	11646	-0.169	-0.0569	No
88	Kcnh2	12046	-0.189	-0.0750	No
89	Tnnc1	12061	-0.189	-0.0699	No
90	Adam12	12101	-0.191	-0.0662	No
91	Mybpc3	12559	-0.217	-0.0869	No
92	Fgf2	12579	-0.218	-0.0812	No
93	Atp2a1	12981	-0.242	-0.0977	No
94	Erbb3	13068	-0.247	-0.0951	No
95	Acsl1	13168	-0.254	-0.0930	No
96	Mapk12	13252	-0.258	-0.0899	No
97	Col4a2	13450	-0.271	-0.0932	No
98	Tnnt1	13515	-0.276	-0.0883	No
99	Itgb4	13542	-0.278	-0.0811	No
100	Tsc2	13563	-0.279	-0.0735	No
101	Chrnb1	13712	-0.289	-0.0733	No
102	Ptp4a3	13768	-0.293	-0.0673	No
103	Mras	13797	-0.295	-0.0597	No
104	Sgcd	14112	-0.314	-0.0687	No
105	Tpm2	14489	-0.347	-0.0804	No
106	Lsp1	14615	-0.357	-0.0766	No
107	Csrp3	14814	-0.375	-0.0767	No
108	Igfbp7	14955	-0.388	-0.0729	No
109	Cryab	15051	-0.399	-0.0660	No
110	Nos1	15080	-0.400	-0.0550	No
111	Reep1	15088	-0.401	-0.0428	No
112	Notch1	15091	-0.401	-0.0302	No
113	Sh2b1	15122	-0.405	-0.0193	No
114	Gpx3	15447	-0.444	-0.0248	No
115	Myl4	15551	-0.456	-0.0166	No
116	Mef2d	15843	-0.506	-0.0181	No
117	Mylk	15871	-0.513	-0.0035	No
118	Smtn	15942	-0.527	0.0089	No
119	Myom1	16085	-0.561	0.0181	No
120	Lpin1	16215	-0.598	0.0292	No