DatasetBasophil.Basophil_Pheno.cls
#Group2_versus_Group4.Basophil_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.30954725
Normalized Enrichment Score (NES)1.0890609
Nominal p-value0.40490797
FDR q-value0.71979487
FWER p-Value0.992
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Odc1440.9360.0218Yes
2Cdc25b2840.6600.0245Yes
3Egf3660.6200.0358Yes
4Hspa83860.6130.0506Yes
5Rad215740.5590.0539Yes
6Hnrnpu6420.5410.0640Yes
7Amd16730.5330.0760Yes
8Rad54l6980.5270.0883Yes
9Xpo17140.5240.1011Yes
10Mad2l17180.5230.1146Yes
11Tent4a7930.5050.1233Yes
12Fbxo58750.4930.1312Yes
13G3bp110000.4740.1361Yes
14Kpnb110210.4700.1471Yes
15Lmnb111160.4560.1533Yes
16Upf111330.4550.1642Yes
17Lbr11620.4510.1743Yes
18Mcm613310.4270.1753Yes
19Mtf213810.4200.1833Yes
20H2bc1215100.4050.1861Yes
21Sfpq15580.4010.1937Yes
22Cenpf15790.3980.2029Yes
23Mcm516300.3930.2101Yes
24Fancc17150.3850.2151Yes
25Hnrnpd17520.3810.2228Yes
26Tra2b17770.3790.2313Yes
27Cdkn1b17780.3790.2412Yes
28Srsf118150.3760.2488Yes
29Mcm319040.3700.2532Yes
30Marcks19550.3660.2597Yes
31Chek119770.3640.2679Yes
32Kif1119930.3610.2764Yes
33Kif5b19990.3610.2855Yes
34Racgap124680.3160.2654Yes
35Espl125760.3060.2670Yes
36Syncrip29030.2810.2545Yes
37Odf229320.2790.2601Yes
38Chaf1a29670.2750.2652Yes
39Ube2s30520.2700.2672Yes
40Cdc25a30530.2700.2742Yes
41Top2a31760.2600.2736Yes
42Cul332070.2590.2786Yes
43Stil33460.2490.2767Yes
44Bard133830.2460.2809Yes
45Kif434010.2450.2863Yes
46Slc12a235230.2350.2851Yes
47Bcl335560.2330.2893Yes
48Cdkn2c36570.2250.2891Yes
49Hif1a36810.2230.2935Yes
50Tpx237290.2210.2964Yes
51Numa138620.2120.2940Yes
52Tmpo39050.2090.2969Yes
53Ncl39810.2030.2976Yes
54Aurka41270.1950.2939Yes
55Prpf4b41390.1940.2983Yes
56Smc1a42630.1850.2957Yes
57Pafah1b142760.1850.2998Yes
58Prc143220.1820.3018Yes
59Ilf345130.1700.2948Yes
60E2f346210.1680.2927Yes
61Ttk47460.1620.2894Yes
62Srsf1047940.1590.2907Yes
63Top148340.1570.2924Yes
64Cul548620.1550.2948Yes
65Notch248870.1540.2974Yes
66Kif2350520.1440.2912Yes
67Mapk1450560.1440.2948Yes
68Mcm251260.1410.2943Yes
69Uck251320.1400.2977Yes
70Katna151660.1390.2993Yes
71Smarcc151910.1370.3014Yes
72Stag152030.1360.3043Yes
73Dtymk52090.1360.3076Yes
74Ewsr152510.1340.3086Yes
75Pura53450.1290.3063Yes
76Casp8ap253510.1280.3094Yes
77Cdc2754170.1270.3087Yes
78Arid4a54580.1240.3095Yes
79Dkc156170.1150.3030No
80Foxn356270.1150.3054No
81Mnat157720.1070.2995No
82Cdc757780.1070.3020No
83Mki6758470.1030.3005No
84Cdk158570.1020.3026No
85Cenpe59190.0990.3015No
86Map3k2060090.0950.2986No
87Kif2c60120.0950.3010No
88Plk461050.0910.2978No
89Wrn61170.0900.2995No
90Nek261250.0900.3014No
91Kif20b62820.0810.2941No
92Incenp63890.0760.2896No
93Cul163940.0760.2913No
94Ccna264160.0740.2920No
95Hmga1b65800.0670.2839No
96Smad365820.0670.2856No
97Ccnf66930.0610.2805No
98Mybl267120.0600.2810No
99Ss1867790.0560.2784No
100Dr167930.0550.2791No
101Dbf468360.0530.2779No
102Cul4a68780.0500.2767No
103Hmgb369930.0450.2710No
104Ccnd170170.0440.2708No
105Abl170710.0410.2686No
106Kmt5a71800.0360.2630No
107Atf572900.0290.2572No
108Lig374160.0230.2502No
109Smc474750.0200.2472No
110Slc38a174940.0190.2466No
111Knl175140.0180.2459No
112Rbl176430.0120.2385No
113Kif2276540.0110.2382No
114Slc7a177370.0070.2334No
115Rpa277700.0060.2316No
116Sqle77730.0060.2316No
117Bub177860.0050.2311No
118Exo178630.0010.2265No
119Pml7948-0.0000.2214No
120Cdc208001-0.0020.2183No
121Nasp8139-0.0080.2102No
122Rad23b8161-0.0090.2092No
123Pbk8572-0.0260.1850No
124Dmd8657-0.0300.1807No
125Hira8769-0.0360.1749No
126Ddx39a8798-0.0370.1742No
127Cdkn38818-0.0380.1741No
128Jpt18839-0.0390.1739No
129Kif158840-0.0390.1749No
130Sap308948-0.0420.1695No
131Atrx8973-0.0430.1692No
132Slc7a59002-0.0440.1686No
133Prim29037-0.0460.1678No
134Nsd29097-0.0480.1655No
135Ctcf9124-0.0490.1652No
136Tle39165-0.0510.1641No
137Pole9198-0.0530.1635No
138Smc29374-0.0610.1545No
139Tgfb19454-0.0640.1514No
140Meis19528-0.0680.1487No
141Ccnb29650-0.0730.1433No
142Gspt19707-0.0760.1419No
143Cenpa9731-0.0770.1425No
144Nup989866-0.0830.1366No
145Plk19943-0.0860.1342No
146Srsf29977-0.0880.1345No
147Orc510038-0.0900.1332No
148Myc10080-0.0920.1332No
149Ndc8010131-0.0940.1326No
150Nup5010201-0.0970.1310No
151Pola210254-0.0990.1304No
152Nolc110341-0.1050.1279No
153Rasal210370-0.1060.1290No
154Pttg110436-0.1100.1279No
155Tfdp110660-0.1210.1176No
156Cdc610694-0.1220.1188No
157Ezh210753-0.1250.1185No
158Aurkb10771-0.1260.1208No
159Tnpo210855-0.1310.1192No
160Cks210969-0.1370.1159No
161Birc511074-0.1420.1133No
162Ythdc111161-0.1450.1119No
163Tacc311214-0.1480.1126No
164H2ax11252-0.1490.1142No
165Stmn111279-0.1500.1165No
166Hmmr11348-0.1520.1164No
167Snrpd111461-0.1590.1137No
168Nusap111523-0.1610.1143No
169Brca211921-0.1820.0950No
170Bub311923-0.1820.0997No
171Prmt512148-0.1940.0912No
172Rps6ka512242-0.1990.0907No
173Polq12334-0.2030.0905No
174Troap12583-0.2180.0812No
175Ccnt112592-0.2190.0864No
176Suv39h112816-0.2320.0789No
177Ube2c12854-0.2340.0828No
178E2f413171-0.2540.0703No
179Pds5b13226-0.2560.0737No
180Traip13271-0.2600.0778No
181Cbx113346-0.2640.0802No
182Hus113902-0.3020.0545No
183Chmp1a14033-0.3100.0547No
184E2f214051-0.3110.0618No
185E2f114148-0.3170.0643No
186Cdc4514661-0.3620.0427No
187Cdk414993-0.3920.0329No
188Cks1b15598-0.4640.0084No
189H2az115647-0.4700.0177No
190Gins215921-0.5220.0148No
191H2az215956-0.5310.0266No
192Orc616441-0.7030.0156No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT