| Dataset | Basophil.Basophil_Pheno.cls #Group2_versus_Group4.Basophil_Pheno.cls #Group2_versus_Group4_repos |
| Phenotype | Basophil_Pheno.cls#Group2_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.20408416 |
| Normalized Enrichment Score (NES) | -0.9803462 |
| Nominal p-value | 0.5009901 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.992 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Myof | 36 | 0.962 | 0.0287 | No |
| 2 | Farp1 | 148 | 0.754 | 0.0462 | No |
| 3 | Fdft1 | 154 | 0.749 | 0.0699 | No |
| 4 | Ass1 | 496 | 0.576 | 0.0678 | No |
| 5 | Sgk1 | 725 | 0.521 | 0.0707 | No |
| 6 | Llgl2 | 762 | 0.511 | 0.0849 | No |
| 7 | Xbp1 | 1042 | 0.467 | 0.0831 | No |
| 8 | Olfm1 | 1208 | 0.445 | 0.0874 | No |
| 9 | Fos | 1657 | 0.391 | 0.0729 | No |
| 10 | Fabp5 | 2032 | 0.356 | 0.0617 | No |
| 11 | Rab31 | 2105 | 0.349 | 0.0686 | No |
| 12 | Kcnk5 | 2266 | 0.333 | 0.0696 | No |
| 13 | Jak2 | 2294 | 0.331 | 0.0786 | No |
| 14 | Fkbp4 | 2504 | 0.313 | 0.0760 | No |
| 15 | Bag1 | 2545 | 0.309 | 0.0835 | No |
| 16 | Add3 | 2753 | 0.294 | 0.0805 | No |
| 17 | Mapt | 2846 | 0.286 | 0.0841 | No |
| 18 | Perp | 2951 | 0.277 | 0.0867 | No |
| 19 | Top2a | 3176 | 0.260 | 0.0815 | No |
| 20 | Cd9 | 3338 | 0.249 | 0.0798 | No |
| 21 | Isg20 | 3345 | 0.249 | 0.0874 | No |
| 22 | Stil | 3346 | 0.249 | 0.0954 | No |
| 23 | Jak1 | 3542 | 0.234 | 0.0912 | No |
| 24 | Car12 | 3646 | 0.226 | 0.0922 | No |
| 25 | Sord | 3660 | 0.225 | 0.0986 | No |
| 26 | Pgr | 3703 | 0.222 | 0.1032 | No |
| 27 | Chpt1 | 4031 | 0.199 | 0.0898 | No |
| 28 | Anxa9 | 4137 | 0.194 | 0.0897 | No |
| 29 | Slc16a1 | 4237 | 0.187 | 0.0897 | No |
| 30 | Zfp36 | 4306 | 0.183 | 0.0915 | No |
| 31 | Id2 | 4389 | 0.178 | 0.0922 | No |
| 32 | Arl3 | 4502 | 0.171 | 0.0910 | No |
| 33 | Klf4 | 4533 | 0.169 | 0.0946 | No |
| 34 | Slc1a4 | 4558 | 0.169 | 0.0986 | No |
| 35 | Gla | 4739 | 0.162 | 0.0929 | No |
| 36 | Ptpn6 | 5051 | 0.144 | 0.0788 | No |
| 37 | Rnaseh2a | 5122 | 0.141 | 0.0791 | No |
| 38 | Hspa4l | 5548 | 0.119 | 0.0572 | No |
| 39 | Rabep1 | 5594 | 0.116 | 0.0583 | No |
| 40 | Pdzk1 | 5694 | 0.111 | 0.0558 | No |
| 41 | Fkbp5 | 5774 | 0.107 | 0.0545 | No |
| 42 | Tpd52l1 | 5864 | 0.102 | 0.0524 | No |
| 43 | Wfs1 | 5927 | 0.099 | 0.0518 | No |
| 44 | Hmgcs2 | 6044 | 0.093 | 0.0478 | No |
| 45 | Plk4 | 6105 | 0.091 | 0.0471 | No |
| 46 | Amfr | 6112 | 0.090 | 0.0496 | No |
| 47 | Unc13b | 6214 | 0.085 | 0.0463 | No |
| 48 | Cish | 6419 | 0.074 | 0.0363 | No |
| 49 | Pdcd4 | 6457 | 0.073 | 0.0364 | No |
| 50 | St14 | 6549 | 0.068 | 0.0331 | No |
| 51 | Slc26a2 | 6679 | 0.062 | 0.0273 | No |
| 52 | Mettl3 | 6772 | 0.056 | 0.0236 | No |
| 53 | Tst | 6918 | 0.048 | 0.0164 | No |
| 54 | St6galnac2 | 6957 | 0.047 | 0.0156 | No |
| 55 | Nxt1 | 6967 | 0.047 | 0.0165 | No |
| 56 | Ccnd1 | 7017 | 0.044 | 0.0150 | No |
| 57 | Ptger3 | 7075 | 0.041 | 0.0129 | No |
| 58 | Cav1 | 7496 | 0.019 | -0.0119 | No |
| 59 | Sfn | 7804 | 0.004 | -0.0303 | No |
| 60 | Tjp3 | 7814 | 0.004 | -0.0307 | No |
| 61 | Gale | 7860 | 0.001 | -0.0334 | No |
| 62 | Cdc20 | 8001 | -0.002 | -0.0418 | No |
| 63 | Aff1 | 8079 | -0.005 | -0.0462 | No |
| 64 | Kif20a | 8223 | -0.012 | -0.0545 | No |
| 65 | Homer2 | 8270 | -0.013 | -0.0569 | No |
| 66 | Myb | 8271 | -0.013 | -0.0564 | No |
| 67 | Etfb | 8349 | -0.017 | -0.0605 | No |
| 68 | Il6st | 8418 | -0.019 | -0.0640 | No |
| 69 | Cd44 | 8474 | -0.022 | -0.0666 | No |
| 70 | Flnb | 8477 | -0.022 | -0.0661 | No |
| 71 | Car2 | 8604 | -0.028 | -0.0728 | No |
| 72 | Slc7a5 | 9002 | -0.044 | -0.0953 | No |
| 73 | Ppif | 9103 | -0.048 | -0.0998 | No |
| 74 | Ptges | 9267 | -0.055 | -0.1079 | No |
| 75 | Slc29a1 | 9361 | -0.060 | -0.1115 | No |
| 76 | Celsr2 | 9551 | -0.068 | -0.1208 | No |
| 77 | Dynlt3 | 9655 | -0.073 | -0.1246 | No |
| 78 | Cdh1 | 9722 | -0.077 | -0.1262 | No |
| 79 | Ncor2 | 9788 | -0.080 | -0.1275 | No |
| 80 | Nab2 | 9913 | -0.084 | -0.1323 | No |
| 81 | Dusp2 | 10098 | -0.093 | -0.1404 | No |
| 82 | Elovl5 | 10200 | -0.097 | -0.1434 | No |
| 83 | Tiam1 | 10229 | -0.099 | -0.1419 | No |
| 84 | Itpk1 | 10321 | -0.103 | -0.1441 | No |
| 85 | Btg3 | 10361 | -0.106 | -0.1431 | No |
| 86 | Large1 | 10368 | -0.106 | -0.1400 | No |
| 87 | Dnajc1 | 10494 | -0.113 | -0.1439 | No |
| 88 | Abhd2 | 10556 | -0.116 | -0.1439 | No |
| 89 | Papss2 | 10587 | -0.117 | -0.1420 | No |
| 90 | Cdc6 | 10694 | -0.122 | -0.1444 | No |
| 91 | Tspan13 | 10701 | -0.122 | -0.1409 | No |
| 92 | Abca3 | 11075 | -0.142 | -0.1588 | No |
| 93 | Scarb1 | 11345 | -0.152 | -0.1702 | No |
| 94 | Slc2a8 | 11469 | -0.159 | -0.1725 | No |
| 95 | Impa2 | 11696 | -0.171 | -0.1807 | No |
| 96 | Bcl2 | 11722 | -0.172 | -0.1767 | No |
| 97 | Pkp3 | 11746 | -0.173 | -0.1726 | No |
| 98 | Siah2 | 11862 | -0.179 | -0.1738 | No |
| 99 | Slc24a3 | 11992 | -0.186 | -0.1756 | No |
| 100 | Tnnc1 | 12061 | -0.189 | -0.1736 | No |
| 101 | Nrip1 | 12154 | -0.194 | -0.1730 | No |
| 102 | Ugdh | 12279 | -0.201 | -0.1740 | No |
| 103 | Aldh3a2 | 12289 | -0.201 | -0.1681 | No |
| 104 | Slc22a5 | 12622 | -0.221 | -0.1810 | No |
| 105 | Cox6c | 12651 | -0.223 | -0.1756 | No |
| 106 | Tmprss3 | 12723 | -0.227 | -0.1726 | No |
| 107 | Atp2b4 | 12729 | -0.228 | -0.1656 | No |
| 108 | Tob1 | 13179 | -0.254 | -0.1845 | No |
| 109 | Clic3 | 13212 | -0.256 | -0.1783 | No |
| 110 | Rps6ka2 | 13279 | -0.260 | -0.1739 | No |
| 111 | Rbbp8 | 13427 | -0.270 | -0.1741 | No |
| 112 | Prkar2b | 13462 | -0.272 | -0.1674 | No |
| 113 | Blvrb | 13608 | -0.282 | -0.1671 | No |
| 114 | Scnn1a | 13695 | -0.288 | -0.1631 | No |
| 115 | Plxnb1 | 13974 | -0.307 | -0.1700 | No |
| 116 | Lsr | 14285 | -0.329 | -0.1782 | No |
| 117 | Cacna2d2 | 14715 | -0.366 | -0.1923 | Yes |
| 118 | Sult2b1 | 14751 | -0.369 | -0.1826 | Yes |
| 119 | Batf | 14964 | -0.389 | -0.1829 | Yes |
| 120 | Dnajc12 | 15002 | -0.393 | -0.1725 | Yes |
| 121 | S100a9 | 15056 | -0.399 | -0.1629 | Yes |
| 122 | Snx10 | 15130 | -0.406 | -0.1543 | Yes |
| 123 | Xrcc3 | 15493 | -0.450 | -0.1617 | Yes |
| 124 | Opn3 | 15639 | -0.468 | -0.1554 | Yes |
| 125 | Mest | 15706 | -0.481 | -0.1440 | Yes |
| 126 | Gfus | 15720 | -0.483 | -0.1293 | Yes |
| 127 | Dhcr7 | 15799 | -0.496 | -0.1181 | Yes |
| 128 | Rapgefl1 | 15817 | -0.500 | -0.1031 | Yes |
| 129 | Gins2 | 15921 | -0.522 | -0.0925 | Yes |
| 130 | Plaat3 | 16052 | -0.554 | -0.0826 | Yes |
| 131 | Idh2 | 16257 | -0.608 | -0.0754 | Yes |
| 132 | Mocs2 | 16284 | -0.620 | -0.0571 | Yes |
| 133 | Igfbp4 | 16388 | -0.666 | -0.0420 | Yes |
| 134 | Il17rb | 16518 | -0.753 | -0.0256 | Yes |
| 135 | Dcxr | 16687 | -1.137 | 0.0007 | Yes |

