Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group2_versus_Group4.Basophil_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.2211516
Normalized Enrichment Score (NES)	0.99516827
Nominal p-value	0.46492985
FDR q-value	0.683822
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	F5	10	1.116	0.0307	Yes
2	Serpinc1	237	0.687	0.0363	Yes
3	Itgam	264	0.669	0.0535	Yes
4	Gmfb	267	0.667	0.0721	Yes
5	C3	279	0.662	0.0900	Yes
6	Dusp5	334	0.633	0.1045	Yes
7	Cd36	520	0.570	0.1093	Yes
8	Anxa5	611	0.549	0.1193	Yes
9	Stx4a	690	0.529	0.1295	Yes
10	Lcp2	977	0.477	0.1256	Yes
11	Cfb	985	0.475	0.1385	Yes
12	C1qa	989	0.475	0.1516	Yes
13	C1qc	1230	0.440	0.1495	Yes
14	Hspa1a	1352	0.423	0.1540	Yes
15	Dusp6	1393	0.418	0.1634	Yes
16	Pdp1	1506	0.406	0.1680	Yes
17	Dock9	1683	0.388	0.1682	Yes
18	Gngt2	1986	0.362	0.1602	Yes
19	Lipa	2003	0.360	0.1693	Yes
20	Casp9	2149	0.344	0.1702	Yes
21	Lap3	2187	0.340	0.1775	Yes
22	Jak2	2294	0.331	0.1804	Yes
23	Lgmn	2487	0.314	0.1776	Yes
24	Cblb	2519	0.312	0.1845	Yes
25	Lck	2568	0.307	0.1902	Yes
26	Actn2	2635	0.303	0.1947	Yes
27	Ctsb	2645	0.303	0.2027	Yes
28	Rbsn	2781	0.292	0.2027	Yes
29	Rnf4	2858	0.286	0.2061	Yes
30	Tnfaip3	2931	0.279	0.2096	Yes
31	Prep	3064	0.269	0.2092	Yes
32	Pim1	3113	0.265	0.2137	Yes
33	Ctso	3114	0.265	0.2212	Yes
34	Cp	3483	0.239	0.2056	No
35	Gnb4	3553	0.234	0.2080	No
36	Ctsc	3641	0.226	0.2091	No
37	Dpp4	3666	0.224	0.2140	No
38	Pclo	3893	0.210	0.2062	No
39	Calm3	4046	0.198	0.2026	No
40	Ctsl	4098	0.196	0.2050	No
41	Hnf4a	4181	0.191	0.2054	No
42	Hspa5	4240	0.187	0.2071	No
43	Usp8	4261	0.186	0.2111	No
44	Was	4406	0.176	0.2074	No
45	Gzmb	4714	0.164	0.1934	No
46	Ctsd	4960	0.150	0.1828	No
47	Plaur	5110	0.141	0.1778	No
48	Usp14	5123	0.141	0.1810	No
49	Grb2	5157	0.139	0.1829	No
50	Cr2	5213	0.136	0.1834	No
51	Prkcd	5219	0.136	0.1869	No
52	Casp3	5359	0.128	0.1821	No
53	Src	5368	0.128	0.1852	No
54	Gng2	5402	0.127	0.1868	No
55	Kif2a	5583	0.117	0.1792	No
56	Prcp	5755	0.108	0.1719	No
57	Ppp4c	5764	0.108	0.1744	No
58	Atox1	6070	0.092	0.1586	No
59	Olr1	6152	0.088	0.1562	No
60	Gnai3	6153	0.088	0.1587	No
61	Fdx1	6206	0.085	0.1579	No
62	Vcpip1	6320	0.079	0.1533	No
63	Irf1	6381	0.076	0.1518	No
64	Irf2	6403	0.075	0.1527	No
65	Psen1	6428	0.074	0.1533	No
66	Serpinb2	7411	0.023	0.0946	No
67	Lgals3	7642	0.012	0.0810	No
68	Rce1	7705	0.009	0.0775	No
69	Il6	7749	0.007	0.0751	No
70	Dgkg	7840	0.002	0.0697	No
71	S100a13	8039	-0.004	0.0579	No
72	Pik3ca	8077	-0.005	0.0558	No
73	Ang	8256	-0.013	0.0454	No
74	Brpf3	8352	-0.017	0.0401	No
75	Cpq	8426	-0.020	0.0363	No
76	Adam9	8433	-0.020	0.0365	No
77	Mmp15	8451	-0.021	0.0360	No
78	Car2	8604	-0.028	0.0276	No
79	Gpd2	8697	-0.032	0.0230	No
80	Ehd1	8768	-0.036	0.0198	No
81	Ppp2cb	8806	-0.037	0.0186	No
82	Usp15	8813	-0.038	0.0193	No
83	Lamp2	8957	-0.043	0.0118	No
84	Pla2g4a	9088	-0.048	0.0053	No
85	Gnai2	9092	-0.048	0.0065	No
86	Zeb1	9125	-0.049	0.0059	No
87	Akap10	9484	-0.066	-0.0139	No
88	Usp16	9669	-0.074	-0.0229	No
89	Kcnip3	9682	-0.075	-0.0215	No
90	L3mbtl4	9835	-0.082	-0.0284	No
91	Raf1	10120	-0.094	-0.0429	No
92	Ctsh	10286	-0.101	-0.0501	No
93	Ctss	10305	-0.102	-0.0483	No
94	Rabif	10364	-0.106	-0.0488	No
95	Pik3cg	10609	-0.118	-0.0602	No
96	Irf7	10672	-0.121	-0.0606	No
97	Dgkh	10716	-0.123	-0.0597	No
98	Gca	10871	-0.132	-0.0653	No
99	Sh2b3	11150	-0.145	-0.0781	No
100	Dock4	11339	-0.152	-0.0852	No
101	Fyn	11574	-0.165	-0.0947	No
102	Cdh13	11611	-0.167	-0.0922	No
103	Cpm	11830	-0.177	-0.1004	No
104	Lrp1	11922	-0.182	-0.1008	No
105	Mmp8	11931	-0.183	-0.0961	No
106	Kcnip2	11956	-0.184	-0.0924	No
107	Calm1	12254	-0.200	-0.1048	No
108	Timp2	12301	-0.202	-0.1019	No
109	Spock2	12322	-0.203	-0.0974	No
110	Lyn	12338	-0.203	-0.0926	No
111	Pdgfb	12363	-0.205	-0.0883	No
112	F10	12414	-0.208	-0.0855	No
113	Plscr1	12475	-0.212	-0.0831	No
114	Casp4	12567	-0.218	-0.0825	No
115	Casp7	12623	-0.221	-0.0797	No
116	Dock10	12637	-0.222	-0.0742	No
117	Lta4h	12676	-0.225	-0.0702	No
118	Gp1ba	12743	-0.228	-0.0678	No
119	Sirt6	12849	-0.234	-0.0676	No
120	Rhog	12871	-0.235	-0.0623	No
121	Dyrk2	13124	-0.251	-0.0704	No
122	Col4a2	13450	-0.271	-0.0825	No
123	Fn1	13562	-0.279	-0.0814	No
124	Csrp1	13586	-0.281	-0.0749	No
125	Gata3	13611	-0.282	-0.0684	No
126	Pik3r5	13631	-0.284	-0.0616	No
127	Mmp14	13696	-0.288	-0.0574	No
128	F8	13697	-0.288	-0.0493	No
129	Fcer1g	13709	-0.289	-0.0418	No
130	Plg	13779	-0.294	-0.0377	No
131	Cebpb	13827	-0.297	-0.0322	No
132	F7	13943	-0.305	-0.0306	No
133	Cdk5r1	14153	-0.318	-0.0344	No
134	Gnb2	14193	-0.321	-0.0277	No
135	Gp9	14286	-0.329	-0.0240	No
136	Xpnpep1	14432	-0.342	-0.0232	No
137	Psmb9	14645	-0.360	-0.0259	No
138	Pfn1	14812	-0.375	-0.0254	No
139	Cd46	14925	-0.385	-0.0214	No
140	Plek	14994	-0.392	-0.0145	No
141	S100a9	15056	-0.399	-0.0070	No
142	Apoc1	15066	-0.400	0.0037	No
143	Casp1	15111	-0.404	0.0124	No
144	C2	15224	-0.416	0.0173	No
145	Prdm4	15263	-0.421	0.0268	No
146	Msrb1	15327	-0.428	0.0350	No
147	Prss36	15650	-0.470	0.0288	No
148	Phex	15887	-0.515	0.0290	No
149	Maff	16461	-0.714	0.0144	No