Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group2_versus_Group4.Basophil_Pheno.cls #Group2_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class	1
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.25932124
Normalized Enrichment Score (NES)	1.0344478
Nominal p-value	0.40503877
FDR q-value	0.62190825
FWER p-Value	0.999

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Nectin3	139	0.762	0.0125	Yes
2	Fbn1	179	0.722	0.0299	Yes
3	Tjp1	223	0.694	0.0464	Yes
4	Amigo2	272	0.666	0.0617	Yes
5	Cdk8	291	0.654	0.0785	Yes
6	Actn3	323	0.637	0.0942	Yes
7	Itga10	350	0.627	0.1098	Yes
8	Map4k2	362	0.621	0.1261	Yes
9	Cdh4	497	0.575	0.1338	Yes
10	Jup	536	0.567	0.1471	Yes
11	Cadm3	564	0.562	0.1608	Yes
12	Stx4a	690	0.529	0.1678	Yes
13	B4galt1	724	0.521	0.1801	Yes
14	Mpzl1	743	0.516	0.1932	Yes
15	Nexn	839	0.499	0.2011	Yes
16	Nrtn	913	0.486	0.2100	Yes
17	Traf1	968	0.477	0.2199	Yes
18	Inppl1	1191	0.448	0.2187	Yes
19	Shroom2	1264	0.436	0.2263	Yes
20	Myh9	1271	0.435	0.2379	Yes
21	Ctnna1	1301	0.431	0.2480	Yes
22	Ywhah	1438	0.413	0.2511	Yes
23	Icam5	1488	0.408	0.2593	Yes
24	Myh10	1859	0.373	0.2472	No
25	Gtf2f1	1974	0.364	0.2503	No
26	Lamb3	2146	0.344	0.2494	No
27	Layn	2282	0.332	0.2504	No
28	Epb41l2	2481	0.315	0.2470	No
29	Plcg1	2601	0.304	0.2482	No
30	Actn2	2635	0.303	0.2545	No
31	Cd276	3001	0.274	0.2400	No
32	Pten	3035	0.271	0.2454	No
33	Alox8	3118	0.265	0.2477	No
34	Lima1	3195	0.259	0.2503	No
35	Ikbkg	3378	0.246	0.2460	No
36	Rasa1	3412	0.244	0.2507	No
37	Adam15	3493	0.238	0.2524	No
38	Vcam1	3559	0.233	0.2549	No
39	Gamt	3623	0.228	0.2573	No
40	Wnk4	4165	0.192	0.2299	No
41	Akt3	4250	0.187	0.2299	No
42	Cap1	4319	0.182	0.2308	No
43	Evl	4336	0.181	0.2348	No
44	Tsc1	4426	0.175	0.2343	No
45	Insig1	4701	0.165	0.2222	No
46	Msn	4730	0.163	0.2250	No
47	Dhx16	5013	0.147	0.2120	No
48	Tial1	5014	0.147	0.2160	No
49	Mapk14	5056	0.144	0.2175	No
50	Src	5368	0.128	0.2022	No
51	Icam1	5500	0.122	0.1976	No
52	Ptprc	5920	0.099	0.1751	No
53	Vwf	5950	0.098	0.1760	No
54	Itgb1	5988	0.096	0.1764	No
55	Map3k20	6009	0.095	0.1778	No
56	Sdc3	6414	0.074	0.1554	No
57	Skap2	6482	0.072	0.1534	No
58	Sorbs3	6535	0.069	0.1521	No
59	Nf2	6542	0.069	0.1536	No
60	Nf1	6556	0.068	0.1547	No
61	Mmp2	6611	0.065	0.1532	No
62	Hadh	6806	0.054	0.1430	No
63	Amh	6909	0.049	0.1382	No
64	Nrap	6989	0.046	0.1347	No
65	Mapk11	7558	0.017	0.1008	No
66	Itga2	7605	0.014	0.0984	No
67	Zyx	7785	0.005	0.0878	No
68	Dlg1	8009	-0.003	0.0744	No
69	Vcl	8184	-0.010	0.0641	No
70	Thbs3	8339	-0.016	0.0553	No
71	Adam9	8433	-0.020	0.0502	No
72	Jam3	8506	-0.024	0.0465	No
73	Amigo1	8804	-0.037	0.0296	No
74	Icam4	8884	-0.040	0.0259	No
75	Ptk2	9010	-0.045	0.0196	No
76	Gnai2	9092	-0.048	0.0160	No
77	Slit2	9136	-0.050	0.0148	No
78	Mvd	9159	-0.051	0.0149	No
79	Pecam1	9247	-0.054	0.0111	No
80	Actb	9312	-0.058	0.0088	No
81	Itga9	9351	-0.060	0.0082	No
82	Nectin1	9394	-0.062	0.0073	No
83	Taok2	9468	-0.065	0.0047	No
84	Col16a1	9498	-0.066	0.0048	No
85	Akt2	9604	-0.071	0.0004	No
86	Pals1	9618	-0.072	0.0016	No
87	Rsu1	9643	-0.073	0.0021	No
88	Nectin4	9670	-0.074	0.0026	No
89	Cdh1	9722	-0.077	0.0016	No
90	Crat	9726	-0.077	0.0035	No
91	Cnn2	9806	-0.081	0.0010	No
92	Sirpa	9832	-0.082	0.0017	No
93	Shc1	9974	-0.088	-0.0044	No
94	Actg1	10029	-0.090	-0.0052	No
95	Cd34	10047	-0.091	-0.0038	No
96	Cldn15	10226	-0.098	-0.0118	No
97	Wasl	10426	-0.109	-0.0208	No
98	Icam2	10482	-0.112	-0.0211	No
99	Pik3cb	10647	-0.120	-0.0277	No
100	Actn4	10752	-0.125	-0.0305	No
101	Ctnnd1	10816	-0.129	-0.0308	No
102	Rras	10825	-0.129	-0.0278	No
103	Tmem8b	10907	-0.133	-0.0290	No
104	Pard6g	11048	-0.141	-0.0336	No
105	Tspan4	11179	-0.146	-0.0374	No
106	Cd274	11323	-0.151	-0.0419	No
107	Cd86	11491	-0.160	-0.0476	No
108	Syk	11517	-0.161	-0.0447	No
109	Kcnh2	12046	-0.189	-0.0714	No
110	Vcan	12089	-0.190	-0.0688	No
111	Thy1	12145	-0.193	-0.0668	No
112	Sympk	12375	-0.206	-0.0750	No
113	Nectin2	12463	-0.211	-0.0744	No
114	Vav2	12565	-0.217	-0.0746	No
115	Pkd1	12663	-0.224	-0.0743	No
116	Vasp	12690	-0.226	-0.0697	No
117	Exoc4	12804	-0.232	-0.0702	No
118	Actn1	13243	-0.258	-0.0896	No
119	Hras	13319	-0.262	-0.0869	No
120	Itgb4	13542	-0.278	-0.0927	No
121	Cdh11	13762	-0.293	-0.0979	No
122	Cdh3	13972	-0.307	-0.1021	No
123	Sgce	14180	-0.320	-0.1058	No
124	Ldlrap1	14281	-0.328	-0.1029	No
125	Arpc2	14372	-0.336	-0.0991	No
126	Rhof	14396	-0.338	-0.0912	No
127	Pik3r3	14516	-0.349	-0.0888	No
128	Arhgef6	14530	-0.351	-0.0800	No
129	Adamts5	14738	-0.368	-0.0824	No
130	Myl12b	14752	-0.370	-0.0730	No
131	Pfn1	14812	-0.375	-0.0663	No
132	Nlgn2	15223	-0.416	-0.0797	No
133	Nlgn3	15231	-0.417	-0.0687	No
134	Lama3	15522	-0.452	-0.0738	No
135	Pbx2	15592	-0.462	-0.0653	No
136	Tgfbi	15603	-0.464	-0.0532	No
137	Cercam	15785	-0.495	-0.0505	No
138	Baiap2	15993	-0.540	-0.0482	No
139	Atp1a3	16101	-0.565	-0.0392	No
140	Bmp1	16107	-0.566	-0.0240	No
141	Tubg1	16186	-0.591	-0.0125	No
142	Cadm2	16501	-0.744	-0.0111	No
143	Rac2	16595	-0.837	0.0063	No