Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group2_versus_Group3.Basophil_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	1
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.34201807
Normalized Enrichment Score (NES)	1.3903356
Nominal p-value	0.076271184
FDR q-value	0.58444136
FWER p-Value	0.663

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gpr183	3	1.279	0.0306	Yes
2	Tnfrsf9	15	0.999	0.0540	Yes
3	Cd69	60	0.817	0.0710	Yes
4	Csf1	104	0.743	0.0862	Yes
5	Ehd1	109	0.738	0.1038	Yes
6	Rhob	124	0.720	0.1203	Yes
7	Trip10	125	0.718	0.1375	Yes
8	Nfil3	146	0.695	0.1531	Yes
9	Klf9	199	0.655	0.1657	Yes
10	Abca1	255	0.622	0.1773	Yes
11	Ppp1r15a	265	0.618	0.1916	Yes
12	Dusp1	272	0.614	0.2061	Yes
13	Mcl1	533	0.531	0.2031	Yes
14	Fosb	664	0.498	0.2073	Yes
15	Hbegf	675	0.495	0.2186	Yes
16	Ccrl2	852	0.464	0.2191	Yes
17	Fos	874	0.462	0.2289	Yes
18	Tnfaip3	926	0.452	0.2367	Yes
19	Irs2	1017	0.436	0.2418	Yes
20	Ptgs2	1056	0.431	0.2499	Yes
21	Btg3	1189	0.411	0.2518	Yes
22	Map2k3	1295	0.397	0.2550	Yes
23	Rigi	1325	0.394	0.2627	Yes
24	Btg2	1430	0.381	0.2656	Yes
25	Ets2	1478	0.374	0.2718	Yes
26	Sgk1	1489	0.373	0.2801	Yes
27	Jag1	1560	0.366	0.2847	Yes
28	Nfkbie	1629	0.361	0.2893	Yes
29	Traf1	1734	0.347	0.2914	Yes
30	Fosl2	1874	0.332	0.2910	Yes
31	Klf6	1922	0.328	0.2960	Yes
32	Il18	1978	0.324	0.3005	Yes
33	Slc16a6	2066	0.316	0.3029	Yes
34	Pdlim5	2163	0.307	0.3045	Yes
35	Ier2	2176	0.306	0.3111	Yes
36	Nfe2l2	2189	0.305	0.3177	Yes
37	Cebpd	2354	0.293	0.3149	Yes
38	B4galt1	2374	0.291	0.3207	Yes
39	Dennd5a	2399	0.290	0.3263	Yes
40	Bhlhe40	2449	0.287	0.3302	Yes
41	Icam1	2615	0.272	0.3268	Yes
42	Ccnl1	2621	0.272	0.3330	Yes
43	Rel	2719	0.265	0.3336	Yes
44	Junb	2808	0.260	0.3345	Yes
45	Egr1	2850	0.257	0.3382	Yes
46	Tank	2920	0.251	0.3401	Yes
47	Lamb3	2987	0.247	0.3420	Yes
48	Bcl6	3125	0.237	0.3395	No
49	Ifih1	3448	0.218	0.3252	No
50	Slc2a3	4012	0.185	0.2957	No
51	Il6	4054	0.182	0.2976	No
52	Vegfa	4116	0.179	0.2982	No
53	Plaur	4245	0.171	0.2946	No
54	Klf4	4271	0.169	0.2972	No
55	Birc2	4378	0.167	0.2948	No
56	Cflar	4563	0.155	0.2874	No
57	Jun	4674	0.151	0.2844	No
58	Id2	4723	0.148	0.2850	No
59	Ripk2	4814	0.143	0.2830	No
60	Btg1	4934	0.137	0.2791	No
61	Yrdc	5031	0.132	0.2765	No
62	B4galt5	5045	0.132	0.2789	No
63	Bcl3	5161	0.127	0.2750	No
64	Cdkn1a	5296	0.119	0.2697	No
65	Tsc22d1	5556	0.105	0.2566	No
66	Dusp5	5683	0.098	0.2514	No
67	Dnajb4	5715	0.097	0.2518	No
68	Klf2	5750	0.095	0.2521	No
69	Ninj1	6061	0.081	0.2353	No
70	Klf10	6487	0.062	0.2111	No
71	Sod2	6633	0.055	0.2036	No
72	Pfkfb3	6688	0.052	0.2016	No
73	Olr1	6809	0.047	0.1955	No
74	Smad3	7000	0.038	0.1850	No
75	Tap1	7032	0.037	0.1840	No
76	Serpinb2	7104	0.034	0.1805	No
77	Tnfaip8	7117	0.033	0.1806	No
78	Tnip2	7138	0.032	0.1801	No
79	Trib1	7243	0.027	0.1745	No
80	Gadd45a	7826	0.002	0.1394	No
81	Birc3	7858	0.001	0.1375	No
82	Nfkbia	7945	-0.002	0.1323	No
83	Zc3h12a	8068	-0.007	0.1252	No
84	Eif1	8206	-0.015	0.1172	No
85	Sat1	8405	-0.024	0.1058	No
86	Gem	8494	-0.027	0.1012	No
87	Zfp36	8606	-0.033	0.0952	No
88	Tnip1	8662	-0.035	0.0928	No
89	Per1	8685	-0.036	0.0923	No
90	Rcan1	8809	-0.042	0.0859	No
91	Nfkb2	8823	-0.043	0.0861	No
92	Gadd45b	9079	-0.055	0.0720	No
93	Nampt	9204	-0.061	0.0660	No
94	Tiparp	9363	-0.066	0.0580	No
95	Plek	9420	-0.068	0.0563	No
96	Ptger4	9581	-0.076	0.0485	No
97	Stat5a	9597	-0.077	0.0494	No
98	Nfkb1	9683	-0.081	0.0462	No
99	Ier5	9807	-0.086	0.0408	No
100	Nr4a1	10008	-0.095	0.0310	No
101	Icosl	10034	-0.096	0.0318	No
102	Irf1	10075	-0.097	0.0318	No
103	Sqstm1	10238	-0.104	0.0245	No
104	Rnf19b	10247	-0.104	0.0265	No
105	Sphk1	10326	-0.108	0.0244	No
106	Il6st	10442	-0.113	0.0202	No
107	Ldlr	10501	-0.117	0.0195	No
108	Ier3	10521	-0.118	0.0212	No
109	Cebpb	10526	-0.118	0.0238	No
110	Myc	10930	-0.136	0.0027	No
111	Mxd1	10992	-0.140	0.0024	No
112	Il7r	11160	-0.148	-0.0042	No
113	Tgif1	11547	-0.168	-0.0234	No
114	Il15ra	11550	-0.168	-0.0195	No
115	Nfat5	11664	-0.175	-0.0221	No
116	Slc2a6	11814	-0.182	-0.0268	No
117	Socs3	11913	-0.186	-0.0282	No
118	Nr4a2	11918	-0.187	-0.0240	No
119	Kdm6b	11991	-0.191	-0.0237	No
120	Zbtb10	12302	-0.207	-0.0375	No
121	Clcf1	12306	-0.207	-0.0327	No
122	Pmepa1	12448	-0.215	-0.0360	No
123	Ifit2	12543	-0.220	-0.0364	No
124	Ptpre	12700	-0.229	-0.0403	No
125	Tnf	12702	-0.229	-0.0349	No
126	Pnrc1	12750	-0.231	-0.0321	No
127	Dusp2	12774	-0.233	-0.0279	No
128	Gfpt2	12890	-0.242	-0.0291	No
129	Fosl1	12958	-0.246	-0.0272	No
130	Snn	13095	-0.253	-0.0293	No
131	Tubb2a	13571	-0.286	-0.0511	No
132	Relb	13673	-0.293	-0.0502	No
133	Litaf	13763	-0.300	-0.0483	No
134	Atp2b1	13787	-0.302	-0.0424	No
135	Rela	14105	-0.328	-0.0537	No
136	Spsb1	14183	-0.335	-0.0503	No
137	Tnfaip2	14205	-0.337	-0.0435	No
138	Phlda1	14475	-0.360	-0.0510	No
139	Fut4	14848	-0.391	-0.0641	No
140	Gch1	14913	-0.397	-0.0584	No
141	Cd80	15099	-0.418	-0.0595	No
142	Ifngr2	15119	-0.420	-0.0506	No
143	Map3k8	15300	-0.440	-0.0509	No
144	Pde4b	15302	-0.441	-0.0403	No
145	Marcks	15907	-0.534	-0.0639	No
146	Maff	16078	-0.579	-0.0603	No
147	Ccnd1	16155	-0.596	-0.0506	No
148	Dram1	16265	-0.625	-0.0421	No
149	Tlr2	16276	-0.633	-0.0275	No
150	Panx1	16333	-0.652	-0.0152	No
151	Cd44	16422	-0.703	-0.0036	No
152	Tnfsf9	16600	-0.842	0.0060	No