DatasetBasophil.Basophil_Pheno.cls
#Group2_versus_Group3.Basophil_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)0.36687028
Normalized Enrichment Score (NES)1.4920017
Nominal p-value0.019417476
FDR q-value0.8735306
FWER p-Value0.447
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ski1780.6740.0494Yes
2Ppp1r15a2650.6180.0993Yes
3Tjp17410.4820.1137Yes
4Id18390.4670.1495Yes
5Cdk99270.4510.1844Yes
6Cdkn1c9680.4430.2215Yes
7Skil12040.4090.2439Yes
8Acvr115990.3630.2526Yes
9Bcar316250.3610.2832Yes
10Smad120090.3200.2888Yes
11Smurf121770.3060.3060Yes
12Cdh124480.2870.3154Yes
13Rhoa25910.2740.3313Yes
14Sptbn126090.2730.3546Yes
15Junb28080.2600.3658Yes
16Hdac134390.2190.3475Yes
17Rab3135290.2120.3610Yes
18Ube2d337300.2000.3669Yes
19Ppm1a41880.1750.3550No
20Smad742530.1700.3663No
21Id247230.1480.3513No
22Map3k757780.0940.2964No
23Hipk258040.0930.3032No
24Thbs159060.0880.3050No
25Klf1064870.0620.2757No
26Smurf265390.0600.2779No
27Slc20a165620.0590.2818No
28Smad370000.0380.2590No
29Fnta72570.0270.2460No
30Ctnnb176060.0120.2261No
31Bmpr1a8374-0.0220.1820No
32Smad68833-0.0440.1584No
33Arid4b9015-0.0520.1522No
34Xiap9267-0.0630.1427No
35Ppp1ca10294-0.1060.0905No
36Wwtr110519-0.1180.0876No
37Tgfbr110541-0.1190.0969No
38Ncor210659-0.1240.1009No
39Trim3311230-0.1510.0801No
40Tgif111547-0.1680.0762No
41Fkbp1a12071-0.1940.0621No
42Apc12131-0.1980.0762No
43Pmepa112448-0.2150.0763No
44Tgfb113319-0.2670.0479No
45Furin14782-0.386-0.0055No
46Ifngr215119-0.4200.0117No
47Bmpr215264-0.4370.0420No
48Eng15677-0.4950.0614No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING