Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group2_versus_Group3.Basophil_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.1881046
Normalized Enrichment Score (NES)	-0.7570237
Nominal p-value	0.94860816
FDR q-value	0.98851496
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Dapk2	36	0.880	0.0289	No
2	Camk2b	182	0.671	0.0439	No
3	Actn3	184	0.669	0.0675	No
4	Itgb5	608	0.508	0.0600	No
5	Hbegf	675	0.495	0.0735	No
6	Ifrd1	847	0.466	0.0797	No
7	Flii	1054	0.431	0.0825	No
8	Gsn	1139	0.419	0.0922	No
9	Itgb1	1234	0.405	0.1009	No
10	Myh9	1353	0.392	0.1076	No
11	Psen2	1517	0.371	0.1109	No
12	Pfkm	1772	0.343	0.1077	No
13	Tnnt1	1833	0.336	0.1160	No
14	Actn2	1986	0.324	0.1182	No
15	Eif4a2	2049	0.318	0.1258	No
16	Kifc3	2321	0.296	0.1199	No
17	Agl	2371	0.292	0.1272	No
18	Bhlhe40	2449	0.287	0.1327	No
19	Col4a2	2477	0.285	0.1412	No
20	Sptan1	2687	0.267	0.1380	No
21	Rit1	2751	0.264	0.1435	No
22	Hdac5	2831	0.258	0.1479	No
23	Ocel1	3054	0.242	0.1431	No
24	App	3059	0.241	0.1514	No
25	Pcx	3240	0.230	0.1486	No
26	Bin1	3286	0.227	0.1540	No
27	Dmpk	3297	0.226	0.1614	No
28	Pkia	3373	0.222	0.1647	No
29	Pick1	3477	0.216	0.1661	No
30	Cd36	3683	0.203	0.1609	No
31	Myo1c	3713	0.201	0.1663	No
32	Myl6b	3893	0.193	0.1623	No
33	Rb1	4199	0.174	0.1501	No
34	Kcnh1	4279	0.169	0.1513	No
35	Ak1	4797	0.144	0.1252	No
36	Gabarapl2	4823	0.142	0.1288	No
37	Cdkn1a	5296	0.119	0.1045	No
38	Lsp1	5314	0.118	0.1076	No
39	Sorbs3	5383	0.114	0.1075	No
40	Csrp3	5410	0.113	0.1100	No
41	Mapre3	5458	0.110	0.1110	No
42	Foxo4	5482	0.109	0.1135	No
43	Mylpf	5762	0.095	0.1000	No
44	Pdlim7	6078	0.080	0.0839	No
45	Ctf1	6173	0.077	0.0809	No
46	Bag1	6361	0.068	0.0720	No
47	Lpin1	6577	0.058	0.0611	No
48	Eno3	6676	0.053	0.0571	No
49	Notch1	6768	0.048	0.0533	No
50	Pde4dip	6817	0.046	0.0520	No
51	Sirt2	6859	0.044	0.0511	No
52	Fkbp1b	6871	0.044	0.0520	No
53	Itgb4	7004	0.038	0.0454	No
54	Atp2a1	7298	0.025	0.0286	No
55	Erbb3	7316	0.024	0.0285	No
56	Cdh13	7481	0.017	0.0192	No
57	Plxnb2	7653	0.010	0.0092	No
58	Ablim1	7655	0.010	0.0095	No
59	Tpd52l1	7687	0.008	0.0079	No
60	Fdps	7772	0.004	0.0030	No
61	Col1a1	7874	0.000	-0.0031	No
62	Nos1	7877	0.000	-0.0033	No
63	Tnnc1	7893	0.000	-0.0042	No
64	Acsl1	7971	-0.003	-0.0087	No
65	Prnp	8061	-0.007	-0.0138	No
66	Klf5	8065	-0.007	-0.0137	No
67	Tpm2	8141	-0.011	-0.0178	No
68	Myl4	8284	-0.018	-0.0258	No
69	Agrn	8757	-0.039	-0.0529	No
70	Igf1	8762	-0.039	-0.0517	No
71	Crat	8835	-0.044	-0.0545	No
72	Gadd45b	9079	-0.055	-0.0672	No
73	Akt2	9225	-0.062	-0.0738	No
74	Tpm3	9305	-0.064	-0.0763	No
75	Mef2a	9650	-0.080	-0.0942	No
76	Atp6ap1	10074	-0.097	-0.1163	No
77	Chrnb1	10305	-0.107	-0.1264	No
78	Sphk1	10326	-0.108	-0.1238	No
79	Wwtr1	10519	-0.118	-0.1312	No
80	Slc6a8	10764	-0.130	-0.1413	No
81	Myh11	10896	-0.135	-0.1444	No
82	Fhl1	10966	-0.139	-0.1437	No
83	Tsc2	11120	-0.146	-0.1478	No
84	Svil	11344	-0.157	-0.1557	No
85	Pygm	11440	-0.162	-0.1557	No
86	Ryr1	11543	-0.168	-0.1559	No
87	Nqo1	11600	-0.171	-0.1532	No
88	Mylk	11859	-0.184	-0.1623	No
89	Sh2b1	12282	-0.206	-0.1804	No
90	Ncam1	12410	-0.213	-0.1806	Yes
91	Mras	12488	-0.217	-0.1775	Yes
92	Gaa	12562	-0.220	-0.1741	Yes
93	Adcy9	12643	-0.225	-0.1710	Yes
94	Tead4	12738	-0.231	-0.1685	Yes
95	Mapk12	12826	-0.238	-0.1653	Yes
96	Lama2	12860	-0.240	-0.1589	Yes
97	Mef2d	13003	-0.248	-0.1587	Yes
98	Ache	13220	-0.262	-0.1624	Yes
99	Syngr2	13254	-0.264	-0.1551	Yes
100	Tgfb1	13319	-0.267	-0.1495	Yes
101	Adam12	13337	-0.269	-0.1410	Yes
102	Large1	13345	-0.269	-0.1319	Yes
103	Igfbp7	13641	-0.291	-0.1394	Yes
104	Gpx3	14111	-0.328	-0.1561	Yes
105	Ppfia4	14237	-0.340	-0.1516	Yes
106	Sgcd	14406	-0.354	-0.1492	Yes
107	Reep1	14409	-0.354	-0.1368	Yes
108	Dmd	15131	-0.422	-0.1654	Yes
109	Mef2c	15259	-0.437	-0.1576	Yes
110	Mybpc3	15270	-0.437	-0.1428	Yes
111	Sorbs1	15295	-0.440	-0.1286	Yes
112	Fgf2	15457	-0.461	-0.1220	Yes
113	Kcnh2	15751	-0.508	-0.1217	Yes
114	Cnn3	15847	-0.525	-0.1089	Yes
115	Nav2	15956	-0.548	-0.0960	Yes
116	Myom1	16197	-0.609	-0.0890	Yes
117	Cryab	16345	-0.657	-0.0746	Yes
118	Ptp4a3	16455	-0.720	-0.0557	Yes
119	Schip1	16542	-0.786	-0.0331	Yes
120	Smtn	16685	-1.201	0.0008	Yes