DatasetBasophil.Basophil_Pheno.cls
#Group2_versus_Group3.Basophil_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)0.31982368
Normalized Enrichment Score (NES)1.3784308
Nominal p-value0.03976143
FDR q-value0.37838537
FWER p-Value0.691
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gpr18331.2790.0335Yes
2Tnfrsf9150.9990.0592Yes
3Nlrp3440.8530.0800Yes
4Cd69600.8170.1007Yes
5Rnf144b740.7910.1207Yes
6Csf11040.7430.1386Yes
7Ptgir1120.7340.1575Yes
8Lcp22180.6370.1679Yes
9Abca12550.6220.1822Yes
10P2rx73690.5790.1906Yes
11Sgms24320.5570.2015Yes
12Rtp45560.5230.2079Yes
13Clec5a6240.5040.2172Yes
14Hbegf6750.4950.2272Yes
15Mefv8380.4670.2297Yes
16Ccrl28520.4640.2412Yes
17Kcnj29440.4490.2476Yes
18Il18rap12810.3990.2378Yes
19Btg214300.3810.2389Yes
20Adora2b14850.3730.2455Yes
21Axl16150.3620.2473Yes
22Sele16230.3610.2564Yes
23Gpc316340.3600.2653Yes
24Slc31a217660.3430.2664Yes
25Gnai318480.3340.2703Yes
26Kif1b18590.3330.2785Yes
27Lck18910.3310.2854Yes
28Klf619220.3280.2922Yes
29Il1819780.3240.2974Yes
30Il18r120900.3140.2990Yes
31Rgs121070.3120.3063Yes
32Slc4a421730.3070.3105Yes
33Raf122300.3030.3151Yes
34C3ar122830.2990.3198Yes
35Icam126150.2720.3070No
36Eif2ak226760.2680.3105No
37Irak235550.2100.2630No
38Gabbr137960.1970.2537No
39Acvr1b38370.1960.2565No
40Il640540.1820.2482No
41Il1541850.1750.2450No
42Tnfrsf1b42200.1730.2475No
43Plaur42450.1710.2505No
44Atp2c147790.1450.2222No
45Ripk248140.1430.2239No
46Cybb48500.1410.2255No
47Gna1548790.1390.2275No
48Cd8251190.1280.2165No
49Dcbld251240.1280.2196No
50Abi152370.1220.2160No
51Ffar252820.1200.2165No
52Cdkn1a52960.1190.2189No
53Ahr55350.1060.2073No
54Sell56590.0990.2025No
55Bst260040.0830.1839No
56Atp2a265190.0610.1545No
57Tapbp66080.0560.1507No
58Nmi67120.0510.1458No
59Olr168090.0470.1412No
60Sri68440.0450.1404No
61P2ry268640.0440.1404No
62Hpn69090.0430.1389No
63Scn1b71130.0330.1275No
64Ifitm172290.0280.1213No
65Stab172780.0260.1191No
66Nod273040.0250.1182No
67Aqp973960.0210.1133No
68Irf776340.0100.0992No
69Nfkbia7945-0.0020.0806No
70Osm7956-0.0020.0800No
71P2rx47967-0.0030.0795No
72Scarf18192-0.0140.0663No
73Hif1a8255-0.0170.0630No
74Il10ra8350-0.0210.0579No
75Slc7a18449-0.0250.0527No
76Slc31a18922-0.0470.0254No
77Sema4d9037-0.0530.0199No
78Adrm19074-0.0550.0192No
79Tnfsf109126-0.0570.0176No
80Nampt9204-0.0610.0146No
81Itgb39486-0.071-0.0005No
82Ptger29494-0.0720.0010No
83Icam49533-0.0730.0006No
84Ptger49581-0.076-0.0002No
85Hrh19611-0.0780.0001No
86Nfkb19683-0.081-0.0021No
87Psen19827-0.087-0.0085No
88Ly6e10029-0.096-0.0181No
89Icosl10034-0.096-0.0158No
90Irf110075-0.097-0.0156No
91Emp310111-0.098-0.0152No
92Sphk110326-0.108-0.0252No
93Ptafr10452-0.114-0.0298No
94Ldlr10501-0.117-0.0296No
95Lyn10561-0.120-0.0300No
96Itga510884-0.135-0.0459No
97Myc10930-0.136-0.0450No
98Mxd110992-0.140-0.0450No
99Selenos10999-0.140-0.0417No
100Ifnar111141-0.147-0.0463No
101Il7r11160-0.148-0.0435No
102Il1011350-0.157-0.0508No
103Lpar111512-0.166-0.0561No
104Il15ra11550-0.168-0.0539No
105Met11648-0.174-0.0552No
106Mmp1411824-0.182-0.0609No
107Pvr11825-0.182-0.0561No
108Fzd511982-0.190-0.0605No
109Acvr2a12030-0.192-0.0583No
110Ptpre12700-0.229-0.0927No
111Ros113009-0.248-0.1047No
112Slc11a213093-0.253-0.1030No
113Gp1ba13097-0.253-0.0965No
114Cmklr113187-0.260-0.0951No
115Rhog13355-0.270-0.0980No
116Atp2b113787-0.302-0.1161No
117Tacr313968-0.315-0.1187No
118Adgre113979-0.316-0.1109No
119Gpr13214050-0.322-0.1067No
120Rela14105-0.328-0.1013No
121Cd4814298-0.345-0.1038No
122Kcnmb214445-0.357-0.1032No
123Il4ra14519-0.364-0.0980No
124Kcna314650-0.375-0.0959No
125Pik3r514759-0.384-0.0923No
126Gch114913-0.397-0.0911No
127Cxcr614933-0.399-0.0817No
128Slamf115114-0.420-0.0815No
129Ifngr215119-0.420-0.0706No
130Pcdh715260-0.437-0.0676No
131Pde4b15302-0.441-0.0584No
132Il1r115805-0.518-0.0751No
133Csf3r16073-0.578-0.0759No
134Tlr216276-0.633-0.0714No
135Slc28a216573-0.815-0.0678No
136Tnfsf916600-0.842-0.0472No
137Ebi316643-0.952-0.0246No
138Calcrl16672-1.0590.0016No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE