Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group2_versus_Group3.Basophil_Pheno.cls #Group2_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.25550395
Normalized Enrichment Score (NES)	-1.0179265
Nominal p-value	0.41550696
FDR q-value	1.0
FWER p-Value	0.999

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pnp	183	0.669	0.0111	No
2	Polr2k	470	0.546	0.0119	No
3	Stx3	473	0.545	0.0298	No
4	Ercc1	480	0.543	0.0474	No
5	Npr2	730	0.484	0.0484	No
6	Ddb1	1420	0.382	0.0194	No
7	Taf13	1584	0.364	0.0216	No
8	Lig1	1883	0.332	0.0146	No
9	Hcls1	2055	0.318	0.0148	No
10	Cmpk2	2179	0.306	0.0175	No
11	Taf9	2187	0.306	0.0272	No
12	Rnmt	2291	0.298	0.0309	No
13	Polr3gl	2422	0.288	0.0326	No
14	Ercc4	3068	0.241	0.0016	No
15	Umps	3221	0.232	0.0001	No
16	Nfx1	3232	0.231	0.0071	No
17	Usp11	3410	0.221	0.0037	No
18	Polr1d	3441	0.219	0.0091	No
19	Ak3	3449	0.218	0.0159	No
20	Gsdme	3470	0.216	0.0219	No
21	Vps37b	3546	0.211	0.0243	No
22	Ercc5	3556	0.210	0.0307	No
23	Supt5	3580	0.209	0.0363	No
24	Zfp707	3835	0.196	0.0274	No
25	Xpc	3880	0.194	0.0312	No
26	Gtf2b	3998	0.186	0.0303	No
27	Pde6g	4232	0.172	0.0219	No
28	Itpa	4595	0.154	0.0051	No
29	Ak1	4797	0.144	-0.0023	No
30	Polr2h	4890	0.139	-0.0032	No
31	Rpa2	4949	0.136	-0.0022	No
32	Rad51	5095	0.130	-0.0067	No
33	Ercc2	5181	0.126	-0.0076	No
34	Gpx4	5213	0.124	-0.0054	No
35	Rev3l	5256	0.121	-0.0040	No
36	Ssrp1	5303	0.118	-0.0028	No
37	Guk1	5363	0.115	-0.0026	No
38	Poll	5452	0.111	-0.0042	No
39	Gtf2f1	5586	0.103	-0.0089	No
40	Polr1h	5608	0.102	-0.0067	No
41	Rrm2b	5710	0.097	-0.0096	No
42	Mpc2	5791	0.094	-0.0114	No
43	Nelfb	5894	0.089	-0.0146	No
44	Sec61a1	5940	0.086	-0.0144	No
45	Pole4	5986	0.084	-0.0144	No
46	Bcap31	6094	0.079	-0.0182	No
47	Nt5c3	6106	0.079	-0.0162	No
48	Zwint	6131	0.078	-0.0151	No
49	Srsf6	6225	0.075	-0.0182	No
50	Nme1	6370	0.068	-0.0247	No
51	Polb	6371	0.068	-0.0224	No
52	Gtf2a2	6791	0.048	-0.0462	No
53	Pcna	6837	0.046	-0.0474	No
54	Rfc4	7026	0.037	-0.0575	No
55	Gtf2h5	7056	0.035	-0.0581	No
56	Ncbp2	7074	0.035	-0.0580	No
57	Prim1	7167	0.030	-0.0625	No
58	Pola2	7200	0.029	-0.0635	No
59	Mrpl40	7225	0.028	-0.0640	No
60	Nudt9	7361	0.022	-0.0714	No
61	Fen1	7393	0.021	-0.0726	No
62	Rpa3	7549	0.014	-0.0815	No
63	Snapc4	7588	0.013	-0.0834	No
64	Ercc8	7738	0.006	-0.0922	No
65	Gmpr2	7794	0.003	-0.0954	No
66	Cetn2	7854	0.001	-0.0989	No
67	Rfc3	7925	-0.001	-0.1031	No
68	Ercc3	8094	-0.009	-0.1130	No
69	Supt4a	8241	-0.016	-0.1213	No
70	Tarbp2	8481	-0.026	-0.1348	No
71	Polr2e	8483	-0.027	-0.1340	No
72	Polr2c	8639	-0.034	-0.1423	No
73	Rad52	8646	-0.034	-0.1415	No
74	Adcy6	8690	-0.036	-0.1429	No
75	Ada	8821	-0.043	-0.1493	No
76	Nelfe	8945	-0.048	-0.1551	No
77	Pold4	8993	-0.051	-0.1563	No
78	Surf1	9024	-0.052	-0.1564	No
79	Adrm1	9074	-0.055	-0.1575	No
80	Ell	9347	-0.066	-0.1718	No
81	Rbx1	9691	-0.081	-0.1898	No
82	Sdcbp	9939	-0.092	-0.2017	No
83	Pold3	9940	-0.092	-0.1987	No
84	Dut	9962	-0.093	-0.1969	No
85	Sf3a3	10086	-0.098	-0.2011	No
86	Cstf3	10142	-0.099	-0.2011	No
87	Ddb2	10338	-0.109	-0.2093	No
88	Eloa	10343	-0.109	-0.2059	No
89	Pola1	10460	-0.115	-0.2091	No
90	Clp1	10495	-0.116	-0.2073	No
91	Polr1c	10534	-0.118	-0.2057	No
92	Gtf2h1	10618	-0.122	-0.2067	No
93	Taf10	11128	-0.147	-0.2326	No
94	Polh	11459	-0.163	-0.2471	No
95	Tyms	11571	-0.170	-0.2482	No
96	Cox17	11622	-0.172	-0.2455	No
97	Polr2a	11636	-0.173	-0.2406	No
98	Smad5	11738	-0.179	-0.2407	No
99	Rfc5	11823	-0.182	-0.2398	No
100	Tk2	11990	-0.191	-0.2435	No
101	Cant1	12127	-0.198	-0.2452	No
102	Tsg101	12299	-0.207	-0.2487	Yes
103	Snapc5	12321	-0.208	-0.2431	Yes
104	Dgcr8	12477	-0.217	-0.2452	Yes
105	Vps28	12545	-0.220	-0.2420	Yes
106	Arl6ip1	12599	-0.222	-0.2379	Yes
107	Ago4	12754	-0.232	-0.2395	Yes
108	Gtf3c5	12843	-0.238	-0.2369	Yes
109	Rala	12866	-0.240	-0.2303	Yes
110	Taf6	13175	-0.259	-0.2403	Yes
111	Taf1c	13201	-0.260	-0.2332	Yes
112	Sac3d1	13209	-0.261	-0.2250	Yes
113	Trp53	13240	-0.263	-0.2181	Yes
114	Dad1	13370	-0.271	-0.2169	Yes
115	Alyref	13392	-0.272	-0.2092	Yes
116	Rae1	13510	-0.281	-0.2069	Yes
117	Nudt21	13530	-0.283	-0.1987	Yes
118	Polr2f	13542	-0.284	-0.1900	Yes
119	Nt5c	13602	-0.288	-0.1840	Yes
120	Dctn4	13664	-0.292	-0.1780	Yes
121	Aaas	13706	-0.296	-0.1707	Yes
122	Impdh2	13925	-0.312	-0.1735	Yes
123	Polr2j	14116	-0.329	-0.1741	Yes
124	Nelfcd	14198	-0.336	-0.1679	Yes
125	Pold1	14344	-0.349	-0.1651	Yes
126	Eif1b	14428	-0.355	-0.1583	Yes
127	Upf3b	14740	-0.382	-0.1645	Yes
128	Polr2g	15022	-0.410	-0.1679	Yes
129	Polr3c	15023	-0.410	-0.1543	Yes
130	Rfc2	15033	-0.411	-0.1413	Yes
131	Aprt	15140	-0.423	-0.1337	Yes
132	Pde4b	15302	-0.441	-0.1288	Yes
133	Taf12	15412	-0.455	-0.1203	Yes
134	Polr2i	15546	-0.472	-0.1127	Yes
135	Edf1	15761	-0.510	-0.1087	Yes
136	Dguok	15916	-0.536	-0.1003	Yes
137	Brf2	16226	-0.616	-0.0986	Yes
138	Gtf2h3	16353	-0.665	-0.0842	Yes
139	Polr2d	16420	-0.701	-0.0650	Yes
140	Pom121	16461	-0.728	-0.0433	Yes
141	Nme4	16471	-0.736	-0.0195	Yes
142	Mpg	16663	-1.002	0.0022	Yes