Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group4.Basophil_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	0
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.23833111
Normalized Enrichment Score (NES)	1.0953236
Nominal p-value	0.2774327
FDR q-value	0.8085864
FWER p-Value	0.995

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bcl6	92	0.799	0.0134	Yes
2	Marcks	130	0.752	0.0291	Yes
3	Mcl1	184	0.718	0.0429	Yes
4	Dusp5	228	0.689	0.0567	Yes
5	Sphk1	241	0.683	0.0722	Yes
6	Dusp1	285	0.664	0.0854	Yes
7	Jun	327	0.644	0.0982	Yes
8	Fosb	334	0.642	0.1131	Yes
9	Gem	385	0.621	0.1249	Yes
10	Zc3h12a	502	0.586	0.1318	Yes
11	Birc2	509	0.583	0.1453	Yes
12	Sat1	616	0.556	0.1521	Yes
13	Btg1	655	0.547	0.1628	Yes
14	Klf6	816	0.513	0.1653	Yes
15	Sgk1	888	0.500	0.1729	Yes
16	Fos	929	0.493	0.1822	Yes
17	Ldlr	1005	0.478	0.1891	Yes
18	Ppp1r15a	1029	0.474	0.1989	Yes
19	Fosl1	1071	0.468	0.2076	Yes
20	Hbegf	1178	0.453	0.2119	Yes
21	Litaf	1220	0.444	0.2200	Yes
22	B4galt1	1231	0.443	0.2299	Yes
23	Klf4	1562	0.400	0.2195	Yes
24	Klf2	1828	0.369	0.2123	Yes
25	Zbtb10	2221	0.331	0.1964	Yes
26	Ccnd1	2249	0.328	0.2026	Yes
27	Cd80	2275	0.328	0.2089	Yes
28	Tap1	2370	0.320	0.2108	Yes
29	Traf1	2402	0.318	0.2165	Yes
30	Olr1	2449	0.315	0.2212	Yes
31	Id2	2549	0.306	0.2225	Yes
32	Atp2b1	2569	0.304	0.2286	Yes
33	Btg2	2844	0.285	0.2188	Yes
34	Cd69	2938	0.277	0.2198	Yes
35	Ier2	2951	0.276	0.2256	Yes
36	Cflar	2952	0.276	0.2322	Yes
37	Dram1	2970	0.275	0.2377	Yes
38	B4galt5	3087	0.268	0.2370	Yes
39	Cd44	3188	0.260	0.2372	Yes
40	Pdlim5	3270	0.255	0.2383	Yes
41	Yrdc	3502	0.239	0.2301	No
42	Panx1	3546	0.237	0.2331	No
43	Trip10	3950	0.209	0.2137	No
44	Ier3	4028	0.205	0.2139	No
45	Relb	4035	0.205	0.2184	No
46	Rnf19b	4314	0.187	0.2061	No
47	Tnfaip3	4345	0.185	0.2087	No
48	Gfpt2	4567	0.173	0.1994	No
49	Rhob	4600	0.170	0.2015	No
50	Irf1	4745	0.162	0.1967	No
51	Ccnl1	4801	0.159	0.1971	No
52	Egr1	4985	0.149	0.1896	No
53	Tnip2	4992	0.149	0.1928	No
54	Lamb3	5104	0.142	0.1895	No
55	Bhlhe40	5173	0.138	0.1886	No
56	Smad3	5211	0.136	0.1896	No
57	Ifngr2	5244	0.134	0.1909	No
58	Cebpb	5314	0.130	0.1898	No
59	Pnrc1	5511	0.120	0.1808	No
60	Dennd5a	5758	0.110	0.1686	No
61	Slc2a3	5965	0.098	0.1585	No
62	Csf1	6134	0.089	0.1504	No
63	Nampt	6300	0.080	0.1424	No
64	Rigi	6356	0.076	0.1409	No
65	Nfil3	6387	0.075	0.1408	No
66	Il18	6552	0.067	0.1325	No
67	Gpr183	6555	0.067	0.1340	No
68	Ptgs2	6751	0.056	0.1235	No
69	Klf10	6912	0.048	0.1150	No
70	Dnajb4	6976	0.045	0.1123	No
71	Fosl2	7016	0.043	0.1110	No
72	Il15ra	7037	0.042	0.1107	No
73	Tlr2	7117	0.038	0.1069	No
74	Myc	7369	0.028	0.0924	No
75	Plek	7405	0.026	0.0909	No
76	Tsc22d1	7421	0.025	0.0906	No
77	Rcan1	8175	-0.010	0.0453	No
78	Map2k3	8223	-0.012	0.0427	No
79	Ptger4	8269	-0.015	0.0404	No
80	Gch1	8271	-0.015	0.0406	No
81	Nfkb1	8318	-0.017	0.0383	No
82	Btg3	8359	-0.019	0.0363	No
83	Snn	8441	-0.022	0.0319	No
84	Pmepa1	8476	-0.023	0.0304	No
85	Pfkfb3	8530	-0.026	0.0278	No
86	Nr4a2	8548	-0.027	0.0274	No
87	Tank	8653	-0.033	0.0219	No
88	Ripk2	8975	-0.050	0.0037	No
89	Zfp36	9046	-0.053	0.0007	No
90	Tnfsf9	9205	-0.062	-0.0073	No
91	Nr4a1	9310	-0.067	-0.0120	No
92	Fut4	9552	-0.080	-0.0247	No
93	Tnip1	9567	-0.081	-0.0236	No
94	Tnfrsf9	9577	-0.081	-0.0222	No
95	Birc3	9854	-0.095	-0.0366	No
96	Slc2a6	9909	-0.098	-0.0376	No
97	Icosl	9953	-0.100	-0.0378	No
98	Tnfaip8	9977	-0.101	-0.0368	No
99	Vegfa	10066	-0.105	-0.0396	No
100	Tnfaip2	10086	-0.106	-0.0382	No
101	Cdkn1a	10188	-0.112	-0.0417	No
102	Sod2	10357	-0.121	-0.0490	No
103	Trib1	10361	-0.121	-0.0463	No
104	Rela	10486	-0.128	-0.0507	No
105	Ehd1	10736	-0.141	-0.0624	No
106	Ptpre	10798	-0.144	-0.0627	No
107	Mxd1	10812	-0.145	-0.0600	No
108	Gadd45b	10950	-0.153	-0.0646	No
109	Clcf1	11182	-0.163	-0.0747	No
110	Per1	11400	-0.176	-0.0837	No
111	Il6	11559	-0.185	-0.0888	No
112	Plaur	11940	-0.206	-0.1069	No
113	Slc16a6	11948	-0.207	-0.1024	No
114	Bcl3	12062	-0.212	-0.1042	No
115	Ifit2	12210	-0.222	-0.1078	No
116	Il7r	12216	-0.222	-0.1028	No
117	Ninj1	12263	-0.224	-0.1003	No
118	Rel	12362	-0.231	-0.1007	No
119	Dusp2	12558	-0.242	-0.1067	No
120	Kdm6b	12677	-0.248	-0.1080	No
121	Ier5	12715	-0.250	-0.1042	No
122	Socs3	12910	-0.261	-0.1098	No
123	Irs2	12918	-0.261	-0.1040	No
124	Nfkbia	13061	-0.271	-0.1061	No
125	Pde4b	13323	-0.290	-0.1150	No
126	Nfe2l2	13530	-0.306	-0.1202	No
127	Tubb2a	13602	-0.310	-0.1171	No
128	Jag1	13825	-0.323	-0.1228	No
129	Cebpd	13857	-0.326	-0.1169	No
130	Ifih1	13900	-0.330	-0.1116	No
131	Nfat5	13967	-0.335	-0.1077	No
132	Sqstm1	14010	-0.338	-0.1022	No
133	Phlda1	14218	-0.353	-0.1063	No
134	Tgif1	14332	-0.363	-0.1045	No
135	Nfkb2	14487	-0.381	-0.1048	No
136	Il6st	14793	-0.408	-0.1135	No
137	Tiparp	14898	-0.418	-0.1098	No
138	Serpinb2	14949	-0.424	-0.1028	No
139	Spsb1	15320	-0.472	-0.1139	No
140	Junb	15467	-0.491	-0.1111	No
141	Abca1	15472	-0.492	-0.0996	No
142	Klf9	15729	-0.537	-0.1023	No
143	Icam1	15770	-0.544	-0.0918	No
144	Nfkbie	15783	-0.547	-0.0796	No
145	Tnf	15792	-0.548	-0.0670	No
146	Eif1	15963	-0.575	-0.0636	No
147	Stat5a	15976	-0.578	-0.0506	No
148	Gadd45a	15977	-0.578	-0.0369	No
149	Map3k8	16317	-0.673	-0.0413	No
150	Ets2	16435	-0.738	-0.0309	No
151	Maff	16572	-0.831	-0.0193	No
152	Ccrl2	16683	-1.133	0.0010	No