DatasetBasophil.Basophil_Pheno.cls
#Group1_versus_Group4.Basophil_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)0.2932273
Normalized Enrichment Score (NES)1.208776
Nominal p-value0.15226337
FDR q-value0.6340174
FWER p-Value0.954
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Smurf11530.7350.0530Yes
2Wwtr13760.6250.0926Yes
3Hdac110040.4790.0955Yes
4Ppp1r15a10290.4740.1342Yes
5Acvr110320.4740.1743Yes
6Sptbn111310.4590.2072Yes
7Bcar315260.4040.2178Yes
8Ctnnb120920.3430.2129Yes
9Smad124780.3120.2162Yes
10Id225490.3060.2379Yes
11Cdh131280.2640.2255Yes
12Cdkn1c34720.2410.2253Yes
13Slc20a135680.2350.2396Yes
14Smad639300.2100.2357Yes
15Rab3139390.2100.2530Yes
16Tjp141150.2000.2594Yes
17Ncor242200.1930.2695Yes
18Thbs144420.1790.2714Yes
19Hipk245920.1710.2769Yes
20Map3k746280.1680.2891Yes
21Smad352110.1360.2656Yes
22Ifngr252440.1340.2751Yes
23Eng52490.1340.2862Yes
24Ski53170.1300.2932Yes
25Ppm1a58210.1060.2720No
26Xiap59630.0990.2719No
27Rhoa61120.0910.2707No
28Klf1069120.0480.2268No
29Tgfb172390.0340.2100No
30Trim338123-0.0070.1576No
31Bmpr28182-0.0100.1550No
32Pmepa18476-0.0230.1393No
33Skil8514-0.0250.1393No
34Fnta8928-0.0470.1184No
35Arid4b10092-0.1070.0576No
36Tgfbr110254-0.1150.0577No
37Apc10796-0.1440.0374No
38Ppp1ca11370-0.1740.0178No
39Smurf211809-0.1990.0083No
40Furin11980-0.2080.0157No
41Bmpr1a12227-0.2220.0198No
42Cdk913078-0.273-0.0081No
43Ube2d313438-0.298-0.0045No
44Tgif114332-0.363-0.0273No
45Smad714671-0.398-0.0139No
46Junb15467-0.491-0.0201No
47Id115506-0.4970.0197No
48Fkbp1a16127-0.6120.0344No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING