DatasetBasophil.Basophil_Pheno.cls
#Group1_versus_Group4.Basophil_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.39142308
Normalized Enrichment Score (NES)-1.5429488
Nominal p-value0.036093418
FDR q-value0.16324943
FWER p-Value0.312
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Fgl24150.610-0.0115No
2Btg16550.547-0.0137No
3Znfx16750.541-0.0027No
4Ube2l69580.487-0.0089No
5Helz214100.418-0.0268No
6Hif1a15030.408-0.0232No
7Pnp16170.394-0.0213No
8Myd8818200.370-0.0252No
9Pfkp18630.365-0.0196No
10Cmtr119900.352-0.0193No
11Trim2523400.323-0.0332No
12Tap123700.320-0.0278No
13Lats225380.307-0.0310No
14Fas28840.281-0.0456No
15Cd6929380.277-0.0426No
16Isoc129400.277-0.0365No
17H2-Aa31010.267-0.0402No
18Wars131660.261-0.0382No
19Jak233160.252-0.0416No
20Tnfsf1033430.250-0.0375No
21Mthfd234180.245-0.0365No
22Ogfr34760.241-0.0346No
23Cmpk235800.235-0.0356No
24Cd3838220.217-0.0453No
25Upp139990.206-0.0513No
26Tnfaip343450.185-0.0680No
27Ncoa343860.183-0.0664No
28Lcp243910.183-0.0625No
29Xaf146680.166-0.0755No
30Irf147450.162-0.0765No
31Stat248930.154-0.0819No
32Vcam151450.140-0.0939No
33Parp1252480.134-0.0971No
34Txnip54550.123-0.1068No
35Sp11054900.121-0.1062No
36Isg2055200.119-0.1052No
37Cmklr155710.118-0.1056No
38Il755880.116-0.1040No
39Cfb56600.115-0.1057No
40Arl4a57170.113-0.1066No
41Stat158700.103-0.1135No
42Samd9l60430.094-0.1218No
43Nup9362630.082-0.1332No
44Nampt63000.080-0.1336No
45Rigi63560.076-0.1352No
46Auts266260.063-0.1501No
47Ptgs267510.056-0.1563No
48Il15ra70370.042-0.1726No
49Bpgm71020.039-0.1756No
50Tdrd775190.020-0.2003No
51Ripk175460.019-0.2014No
52Casp376550.013-0.2077No
53Rnf21376620.013-0.2078No
54Pnpt178220.005-0.2173No
55Gch18271-0.015-0.2440No
56Nfkb18318-0.017-0.2464No
57Pml8331-0.018-0.2468No
58Rapgef68349-0.018-0.2474No
59Stat38381-0.020-0.2488No
60Ptpn68569-0.028-0.2595No
61Irf58679-0.034-0.2653No
62Il4ra8916-0.046-0.2786No
63Ripk28975-0.050-0.2810No
64Itgb78977-0.050-0.2799No
65Eif4e39107-0.056-0.2864No
66Cd749257-0.064-0.2940No
67Adar9411-0.074-0.3016No
68Mvp9470-0.076-0.3034No
69St3gal59557-0.080-0.3068No
70Casp19586-0.082-0.3067No
71Oas39605-0.083-0.3059No
72Pim19747-0.091-0.3124No
73Irf29780-0.092-0.3123No
74Ptpn19811-0.094-0.3120No
75Lysmd29860-0.095-0.3128No
76Sppl2a9921-0.099-0.3142No
77Trim2110022-0.103-0.3179No
78Tnfaip210086-0.106-0.3194No
79Tapbp10139-0.109-0.3201No
80Cdkn1a10188-0.112-0.3205No
81Sod210357-0.121-0.3279No
82Ifi3510509-0.129-0.3342No
83Rsad210668-0.138-0.3407No
84Parp1410760-0.142-0.3430No
85Cd27410810-0.145-0.3427No
86Pla2g4a10881-0.149-0.3436No
87Psma310900-0.150-0.3413No
88Psmb911045-0.155-0.3465No
89Psmb811079-0.157-0.3450No
90Psme211164-0.162-0.3465No
91Psmb1011365-0.174-0.3547No
92Il611559-0.185-0.3622No
93Isg1511562-0.185-0.3582No
94Stat411878-0.203-0.3727No
95Socs112118-0.215-0.3823No
96St8sia412160-0.218-0.3800No
97Batf212161-0.218-0.3751No
98Ifit212210-0.222-0.3730No
99Psma212299-0.227-0.3733No
100Lap312334-0.229-0.3702No
101Gpr1812686-0.248-0.3859Yes
102Rtp412733-0.251-0.3830Yes
103Epsti112785-0.255-0.3804Yes
104Socs312910-0.261-0.3821Yes
105Mx212942-0.263-0.3781Yes
106H2-DMa12943-0.263-0.3722Yes
107Herc612970-0.265-0.3678Yes
108Nfkbia13061-0.271-0.3672Yes
109Casp813115-0.275-0.3642Yes
110Pde4b13323-0.290-0.3703Yes
111Ifnar213454-0.299-0.3714Yes
112Peli113473-0.301-0.3658Yes
113Ptpn213557-0.307-0.3639Yes
114Irf713558-0.307-0.3571Yes
115Sri13586-0.310-0.3518Yes
116Casp713605-0.311-0.3459Yes
117Arid5b13635-0.312-0.3407Yes
118Trim2613793-0.321-0.3430Yes
119P2ry1413859-0.326-0.3396Yes
120Ifih113900-0.330-0.3347Yes
121Nod113905-0.330-0.3275Yes
122Selp13925-0.331-0.3213Yes
123Bank114054-0.340-0.3214Yes
124Ifi3014178-0.350-0.3210Yes
125Trafd114181-0.350-0.3133Yes
126Rbck114208-0.352-0.3070Yes
127Samhd114217-0.353-0.2996Yes
128Nlrc514221-0.353-0.2918Yes
129Il1514250-0.356-0.2856Yes
130Irf914272-0.358-0.2788Yes
131Marchf114412-0.373-0.2789Yes
132Il18bp14473-0.379-0.2740Yes
133Nmi14526-0.385-0.2686Yes
134Vamp814656-0.397-0.2675Yes
135Lgals3bp14710-0.400-0.2617Yes
136Bst214878-0.416-0.2625Yes
137Irf814970-0.426-0.2585Yes
138Il10ra15033-0.434-0.2525Yes
139Dhx5815133-0.447-0.2485Yes
140Usp1815186-0.454-0.2415Yes
141Ifi4415223-0.460-0.2334Yes
142Plscr115280-0.467-0.2263Yes
143Psme115456-0.488-0.2260Yes
144Tor1b15541-0.503-0.2198Yes
145Oasl115691-0.530-0.2170Yes
146Slc25a2815722-0.535-0.2068Yes
147Casp415740-0.539-0.1958Yes
148Icam115770-0.544-0.1854Yes
149Ciita15804-0.549-0.1751Yes
150Ifitm215827-0.552-0.1640Yes
151Ddx6015883-0.561-0.1548Yes
152Cd8615993-0.582-0.1484Yes
153Trim1416022-0.589-0.1369Yes
154Vamp516096-0.606-0.1278Yes
155Ly6e16122-0.611-0.1156Yes
156Ifi2716174-0.629-0.1046Yes
157Psmb216204-0.639-0.0921Yes
158Oas216274-0.658-0.0815Yes
159Rnf3116309-0.669-0.0686Yes
160Gbp316324-0.675-0.0544Yes
161Eif2ak216325-0.675-0.0393Yes
162Ifitm316600-0.862-0.0366Yes
163B2m16623-0.905-0.0177Yes
164Zbp116655-0.9920.0027Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE