Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group4.Basophil_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.2319135
Normalized Enrichment Score (NES)	-1.0628834
Nominal p-value	0.3593429
FDR q-value	0.654493
FWER p-Value	0.993

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tarbp2	34	0.943	0.0212	No
2	Taf1c	439	0.602	0.0116	No
3	Usp11	574	0.565	0.0175	No
4	Ercc4	654	0.547	0.0262	No
5	Rfc4	674	0.541	0.0384	No
6	Bcap31	724	0.531	0.0485	No
7	Zfp707	767	0.523	0.0589	No
8	Gtf2f1	906	0.497	0.0628	No
9	Pold3	946	0.489	0.0725	No
10	Gtf2h1	1012	0.478	0.0804	No
11	Rad51	1030	0.474	0.0910	No
12	Srsf6	1348	0.427	0.0824	No
13	Guk1	1434	0.415	0.0875	No
14	Nelfe	1455	0.414	0.0965	No
15	Xpc	1582	0.397	0.0987	No
16	Pnp	1617	0.394	0.1064	No
17	Supt4a	1855	0.366	0.1011	No
18	Alyref	1941	0.356	0.1047	No
19	Cetn2	2142	0.339	0.1010	No
20	Pom121	2166	0.337	0.1079	No
21	Polr3c	2243	0.329	0.1114	No
22	Gmpr2	2307	0.326	0.1156	No
23	Zwint	2336	0.324	0.1219	No
24	Fen1	2355	0.322	0.1288	No
25	Dgcr8	2367	0.321	0.1360	No
26	Snapc4	2380	0.319	0.1432	No
27	Vps37b	2766	0.288	0.1271	No
28	Polr2a	2778	0.288	0.1335	No
29	Pcna	2871	0.282	0.1349	No
30	Ercc2	2974	0.275	0.1355	No
31	Ak3	3027	0.271	0.1391	No
32	Polh	3095	0.267	0.1416	No
33	Adcy6	3155	0.262	0.1445	No
34	Sdcbp	3211	0.258	0.1475	No
35	Ncbp2	3304	0.252	0.1482	No
36	Cant1	3320	0.252	0.1535	No
37	Cmpk2	3580	0.235	0.1436	No
38	Stx3	3615	0.231	0.1473	No
39	Smad5	3844	0.216	0.1388	No
40	Gtf3c5	3917	0.211	0.1397	No
41	Pold4	3965	0.208	0.1420	No
42	Surf1	4094	0.201	0.1392	No
43	Hcls1	4175	0.196	0.1392	No
44	Ddb1	4979	0.150	0.0944	No
45	Ago4	5090	0.143	0.0913	No
46	Aaas	5178	0.138	0.0894	No
47	Clp1	5334	0.130	0.0833	No
48	Polr1d	5512	0.120	0.0755	No
49	Polr2d	5728	0.112	0.0653	No
50	Umps	5992	0.097	0.0518	No
51	Tk2	6196	0.085	0.0417	No
52	Nelfcd	6302	0.080	0.0373	No
53	Tsg101	6462	0.071	0.0294	No
54	Rala	6779	0.055	0.0117	No
55	Rfc3	7268	0.032	-0.0170	No
56	Taf6	7298	0.031	-0.0180	No
57	Pola2	7319	0.030	-0.0184	No
58	Adrm1	7392	0.027	-0.0221	No
59	Mpc2	7486	0.022	-0.0272	No
60	Ak1	7505	0.021	-0.0278	No
61	Pola1	7779	0.007	-0.0441	No
62	Taf13	7869	0.003	-0.0494	No
63	Nudt9	8045	-0.004	-0.0599	No
64	Rnmt	8146	-0.008	-0.0657	No
65	Upf3b	8183	-0.010	-0.0676	No
66	Nt5c3	8199	-0.011	-0.0683	No
67	Dut	8314	-0.017	-0.0747	No
68	Gtf2h5	8545	-0.026	-0.0880	No
69	Nfx1	8571	-0.028	-0.0888	No
70	Snapc5	8698	-0.035	-0.0955	No
71	Rev3l	8736	-0.037	-0.0969	No
72	Polr2g	9284	-0.066	-0.1283	No
73	Rfc5	9312	-0.067	-0.1282	No
74	Gsdme	9424	-0.074	-0.1331	No
75	Lig1	9522	-0.079	-0.1370	No
76	Ssrp1	9616	-0.083	-0.1406	No
77	Gtf2a2	9646	-0.086	-0.1402	No
78	Supt5	9687	-0.088	-0.1405	No
79	Ercc3	9726	-0.090	-0.1405	No
80	Tyms	9736	-0.090	-0.1389	No
81	Mrpl40	9820	-0.094	-0.1416	No
82	Cstf3	9927	-0.099	-0.1455	No
83	Dguok	9976	-0.101	-0.1459	No
84	Polr1h	9984	-0.101	-0.1439	No
85	Rad52	10048	-0.104	-0.1451	No
86	Rpa2	10101	-0.107	-0.1456	No
87	Nudt21	10309	-0.118	-0.1552	No
88	Eloa	10386	-0.122	-0.1568	No
89	Polr3gl	10730	-0.140	-0.1740	No
90	Npr2	11199	-0.164	-0.1982	No
91	Ell	11254	-0.167	-0.1974	No
92	Taf12	11267	-0.168	-0.1940	No
93	Dctn4	11464	-0.179	-0.2014	No
94	Polr2k	11671	-0.190	-0.2091	No
95	Mpg	11687	-0.190	-0.2053	No
96	Sf3a3	11776	-0.196	-0.2058	No
97	Prim1	12209	-0.221	-0.2265	Yes
98	Polr2e	12213	-0.222	-0.2212	Yes
99	Polb	12261	-0.224	-0.2185	Yes
100	Gtf2h3	12352	-0.230	-0.2182	Yes
101	Brf2	12434	-0.235	-0.2173	Yes
102	Rfc2	12625	-0.246	-0.2227	Yes
103	Ada	12736	-0.252	-0.2232	Yes
104	Gtf2b	12875	-0.259	-0.2251	Yes
105	Nt5c	12904	-0.260	-0.2204	Yes
106	Ercc5	12960	-0.264	-0.2172	Yes
107	Trp53	12991	-0.267	-0.2124	Yes
108	Nelfb	13067	-0.272	-0.2103	Yes
109	Impdh2	13318	-0.289	-0.2182	Yes
110	Pde4b	13323	-0.290	-0.2113	Yes
111	Itpa	13565	-0.308	-0.2183	Yes
112	Rpa3	13644	-0.312	-0.2153	Yes
113	Polr1c	13664	-0.313	-0.2087	Yes
114	Polr2c	13912	-0.330	-0.2155	Yes
115	Eif1b	14047	-0.340	-0.2152	Yes
116	Ercc8	14111	-0.345	-0.2105	Yes
117	Ercc1	14191	-0.351	-0.2067	Yes
118	Poll	14252	-0.356	-0.2015	Yes
119	Polr2j	14363	-0.367	-0.1991	Yes
120	Aprt	14368	-0.368	-0.1902	Yes
121	Gpx4	14577	-0.390	-0.1932	Yes
122	Edf1	14709	-0.400	-0.1912	Yes
123	Rrm2b	14779	-0.407	-0.1854	Yes
124	Polr2i	14794	-0.408	-0.1762	Yes
125	Sec61a1	15064	-0.438	-0.1816	Yes
126	Pold1	15294	-0.469	-0.1839	Yes
127	Nme4	15396	-0.483	-0.1781	Yes
128	Taf9	15571	-0.508	-0.1761	Yes
129	Sac3d1	15689	-0.530	-0.1701	Yes
130	Arl6ip1	15896	-0.564	-0.1686	Yes
131	Taf10	15944	-0.572	-0.1573	Yes
132	Polr2h	16002	-0.584	-0.1464	Yes
133	Polr2f	16154	-0.625	-0.1401	Yes
134	Rbx1	16177	-0.629	-0.1259	Yes
135	Pde6g	16290	-0.663	-0.1163	Yes
136	Nme1	16357	-0.694	-0.1032	Yes
137	Rae1	16396	-0.718	-0.0878	Yes
138	Vps28	16422	-0.727	-0.0714	Yes
139	Ddb2	16555	-0.816	-0.0592	Yes
140	Cox17	16560	-0.823	-0.0392	Yes
141	Dad1	16638	-0.939	-0.0206	Yes
142	Pole4	16653	-0.984	0.0028	Yes