Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group4.Basophil_Pheno.cls #Group1_versus_Group4_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.31547594
Normalized Enrichment Score (NES)	-1.3218757
Nominal p-value	0.060851928
FDR q-value	0.32886532
FWER p-Value	0.773

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	H2-DMb2	360	0.630	-0.0045	No
2	Pf4	668	0.543	-0.0082	No
3	Apbb1	763	0.523	0.0004	No
4	Ncf4	1041	0.473	-0.0034	No
5	Nlrp3	1236	0.442	-0.0030	No
6	Hif1a	1503	0.408	-0.0080	No
7	Mrpl3	1515	0.406	0.0025	No
8	Itgb2	2098	0.343	-0.0233	No
9	Gzmb	2186	0.335	-0.0194	No
10	Abce1	2213	0.332	-0.0119	No
11	Itgal	2228	0.331	-0.0037	No
12	Cd80	2275	0.328	0.0025	No
13	Eif3a	2334	0.324	0.0078	No
14	Tap1	2370	0.320	0.0145	No
15	Flna	2496	0.310	0.0154	No
16	Brca1	2551	0.305	0.0205	No
17	Galnt1	2610	0.301	0.0252	No
18	Fas	2884	0.281	0.0164	No
19	Was	3032	0.271	0.0149	No
20	Crtam	3039	0.270	0.0220	No
21	H2-Aa	3101	0.267	0.0256	No
22	Wars1	3166	0.261	0.0288	No
23	Fcgr2b	3171	0.261	0.0357	No
24	Ets1	3200	0.258	0.0411	No
25	Jak2	3316	0.252	0.0410	No
26	Ccr1	3459	0.242	0.0391	No
27	Ube2n	3729	0.223	0.0289	No
28	Fgr	3766	0.220	0.0328	No
29	Mtif2	3793	0.219	0.0372	No
30	Hcls1	4175	0.196	0.0195	No
31	Dyrk3	4189	0.195	0.0241	No
32	Lcp2	4391	0.183	0.0169	No
33	Ache	4427	0.180	0.0197	No
34	Map3k7	4628	0.168	0.0122	No
35	Cd1d2	5040	0.146	-0.0086	No
36	Ifngr2	5244	0.134	-0.0172	No
37	Il7	5588	0.116	-0.0347	No
38	Il11	5591	0.116	-0.0316	No
39	Traf2	5779	0.109	-0.0400	No
40	Stat1	5870	0.103	-0.0426	No
41	Prkcb	5959	0.099	-0.0452	No
42	Eif4g3	6099	0.091	-0.0511	No
43	Csf1	6134	0.089	-0.0507	No
44	Abi1	6323	0.078	-0.0599	No
45	Il18	6552	0.067	-0.0718	No
46	Eif3d	6850	0.051	-0.0884	No
47	Cdkn2a	7024	0.043	-0.0976	No
48	Tlr2	7117	0.038	-0.1021	No
49	Tgfb1	7239	0.034	-0.1085	No
50	H2-Oa	7282	0.032	-0.1102	No
51	Cd96	7626	0.014	-0.1305	No
52	Bcl10	7671	0.012	-0.1328	No
53	Itk	7799	0.006	-0.1403	No
54	Stab1	7945	0.000	-0.1491	No
55	Cd47	8313	-0.017	-0.1708	No
56	Ptpn6	8569	-0.028	-0.1854	No
57	Eif3j1	8866	-0.043	-0.2021	No
58	Il12a	8901	-0.046	-0.2029	No
59	Il4ra	8916	-0.046	-0.2025	No
60	F2r	8921	-0.047	-0.2015	No
61	Gcnt1	8934	-0.047	-0.2009	No
62	Ptprc	8949	-0.048	-0.2004	No
63	Ripk2	8975	-0.050	-0.2006	No
64	Hdac9	9044	-0.053	-0.2032	No
65	Cd74	9257	-0.064	-0.2143	No
66	Il18rap	9317	-0.067	-0.2160	No
67	Degs1	9337	-0.069	-0.2153	No
68	Lck	9558	-0.080	-0.2264	No
69	Icosl	9953	-0.100	-0.2474	No
70	Cd4	10028	-0.104	-0.2491	No
71	Tapbp	10139	-0.109	-0.2527	No
72	Ly86	10144	-0.109	-0.2500	No
73	Akt1	10402	-0.124	-0.2621	No
74	Thy1	10524	-0.130	-0.2659	No
75	Ifngr1	10742	-0.141	-0.2751	No
76	Spi1	10862	-0.148	-0.2783	No
77	Il4	10911	-0.151	-0.2770	No
78	C2	10955	-0.153	-0.2754	No
79	Psmb10	11365	-0.174	-0.2954	No
80	Gpr65	11419	-0.177	-0.2937	No
81	Csk	11484	-0.180	-0.2927	No
82	Il6	11559	-0.185	-0.2921	No
83	Acvr2a	11799	-0.197	-0.3011	No
84	Stat4	11878	-0.203	-0.3003	No
85	Elane	11976	-0.208	-0.3005	No
86	Map4k1	12036	-0.211	-0.2983	No
87	Bcl3	12062	-0.212	-0.2940	No
88	Socs1	12118	-0.215	-0.2914	No
89	St8sia4	12160	-0.218	-0.2880	No
90	Socs5	12239	-0.223	-0.2866	No
91	Bcat1	12522	-0.241	-0.2970	No
92	Prkcg	12716	-0.250	-0.3018	No
93	H2-DMa	12943	-0.263	-0.3083	Yes
94	Cd79a	13038	-0.270	-0.3066	Yes
95	Cfp	13040	-0.270	-0.2993	Yes
96	Glmn	13064	-0.272	-0.2932	Yes
97	Elf4	13106	-0.275	-0.2882	Yes
98	Il16	13195	-0.280	-0.2859	Yes
99	Ifnar2	13454	-0.299	-0.2933	Yes
100	Irf7	13558	-0.307	-0.2911	Yes
101	Npm1	13601	-0.310	-0.2852	Yes
102	Il10	13690	-0.315	-0.2819	Yes
103	Tap2	13934	-0.332	-0.2875	Yes
104	Tgfb2	13935	-0.332	-0.2784	Yes
105	Igsf6	14122	-0.346	-0.2802	Yes
106	Il27ra	14135	-0.347	-0.2714	Yes
107	Lyn	14193	-0.351	-0.2653	Yes
108	Srgn	14207	-0.352	-0.2564	Yes
109	Capg	14244	-0.355	-0.2489	Yes
110	Il15	14250	-0.356	-0.2395	Yes
111	Nck1	14478	-0.380	-0.2428	Yes
112	Tpd52	14596	-0.391	-0.2392	Yes
113	Ccr2	14672	-0.398	-0.2329	Yes
114	Ikbkb	14857	-0.413	-0.2327	Yes
115	Irf8	14970	-0.426	-0.2278	Yes
116	Tlr6	15006	-0.431	-0.2181	Yes
117	Rps3a1	15014	-0.432	-0.2068	Yes
118	Rpl9	15060	-0.437	-0.1975	Yes
119	Ctss	15161	-0.451	-0.1912	Yes
120	H2-Ob	15279	-0.467	-0.1855	Yes
121	Ccnd3	15286	-0.468	-0.1731	Yes
122	Ccnd2	15431	-0.486	-0.1685	Yes
123	Icam1	15770	-0.544	-0.1741	Yes
124	Tnf	15792	-0.548	-0.1604	Yes
125	Ltb	15890	-0.562	-0.1509	Yes
126	Eif5a	15898	-0.564	-0.1359	Yes
127	Cd247	15981	-0.579	-0.1250	Yes
128	Cd86	15993	-0.582	-0.1098	Yes
129	Ube2d1	16195	-0.635	-0.1046	Yes
130	Rps9	16321	-0.675	-0.0937	Yes
131	Nme1	16357	-0.694	-0.0768	Yes
132	Il12rb1	16369	-0.701	-0.0583	Yes
133	Il2rg	16512	-0.787	-0.0454	Yes
134	B2m	16623	-0.905	-0.0273	Yes
135	Ly75	16689	-1.166	0.0006	Yes