Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group3.Basophil_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	-0.20889522
Normalized Enrichment Score (NES)	-0.8709274
Nominal p-value	0.75697213
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Tnnt1	70	0.814	0.0207	No
2	Lpin1	76	0.808	0.0452	No
3	Ifrd1	106	0.764	0.0669	No
4	Gsn	116	0.751	0.0894	No
5	Flii	447	0.561	0.0867	No
6	Dapk2	522	0.539	0.0987	No
7	Myl6b	563	0.526	0.1124	No
8	Dmpk	571	0.525	0.1281	No
9	Notch1	711	0.488	0.1347	No
10	Mylpf	760	0.478	0.1464	No
11	Myh9	896	0.457	0.1523	No
12	Rit1	1194	0.412	0.1470	No
13	Itgb4	1209	0.411	0.1587	No
14	Rb1	1250	0.405	0.1688	No
15	Hdac5	1281	0.401	0.1793	No
16	Klf5	1494	0.378	0.1781	No
17	Kcnh1	1712	0.355	0.1758	No
18	Pick1	1719	0.354	0.1863	No
19	Myo1c	2349	0.300	0.1576	No
20	Itgb1	2363	0.299	0.1660	No
21	Nos1	2540	0.285	0.1641	No
22	Sptan1	2579	0.284	0.1705	No
23	Pde4dip	2700	0.274	0.1717	No
24	Agl	2772	0.270	0.1757	No
25	Gabarapl2	2829	0.266	0.1804	No
26	Itgb5	3088	0.244	0.1724	No
27	Reep1	3147	0.240	0.1762	No
28	Hbegf	3255	0.233	0.1769	No
29	Camk2b	3422	0.222	0.1737	No
30	Col4a2	3697	0.205	0.1635	No
31	Mef2a	4060	0.184	0.1473	No
32	Agrn	4089	0.182	0.1512	No
33	Ocel1	4094	0.182	0.1565	No
34	Lsp1	4198	0.177	0.1557	No
35	Eif4a2	4488	0.160	0.1432	No
36	Actn3	4533	0.158	0.1454	No
37	Crat	4762	0.145	0.1361	No
38	Atp2a1	4840	0.141	0.1358	No
39	Fdps	4909	0.137	0.1359	No
40	Akt2	4987	0.133	0.1353	No
41	Myh11	5303	0.116	0.1199	No
42	Tsc2	5399	0.113	0.1176	No
43	Ppfia4	5534	0.106	0.1128	No
44	Cdkn1a	5671	0.099	0.1076	No
45	Mapre3	5675	0.099	0.1105	No
46	Sh2b1	5781	0.094	0.1070	No
47	Cdh13	5947	0.086	0.0997	No
48	Pkia	6020	0.082	0.0979	No
49	Sphk1	6101	0.078	0.0954	No
50	Slc6a8	6250	0.070	0.0887	No
51	Mapk12	6361	0.065	0.0840	No
52	Bhlhe40	6841	0.041	0.0564	No
53	Chrnb1	7208	0.023	0.0350	No
54	App	7321	0.017	0.0287	No
55	Lama2	7344	0.015	0.0279	No
56	Erbb3	7442	0.011	0.0224	No
57	Tead4	7486	0.010	0.0201	No
58	Gaa	7545	0.007	0.0168	No
59	Fkbp1b	7691	0.002	0.0081	No
60	Mef2d	7712	0.001	0.0069	No
61	Col1a1	7734	0.000	0.0057	No
62	Tnnc1	7759	0.000	0.0042	No
63	Acsl1	7844	-0.003	-0.0008	No
64	Psen2	7893	-0.006	-0.0035	No
65	Ncam1	8098	-0.016	-0.0153	No
66	Ryr1	8177	-0.019	-0.0194	No
67	Igfbp7	8229	-0.021	-0.0218	No
68	Ak1	8439	-0.032	-0.0334	No
69	Wwtr1	8481	-0.034	-0.0349	No
70	Adcy9	8612	-0.040	-0.0415	No
71	Pdlim7	8759	-0.046	-0.0489	No
72	Bin1	9417	-0.079	-0.0861	No
73	Sorbs1	9917	-0.104	-0.1130	No
74	Foxo4	9923	-0.104	-0.1101	No
75	Svil	10613	-0.137	-0.1474	No
76	Pfkm	10683	-0.142	-0.1472	No
77	Tgfb1	11190	-0.170	-0.1726	No
78	Fhl1	11419	-0.181	-0.1808	No
79	Large1	11821	-0.204	-0.1987	No
80	Myom1	11833	-0.204	-0.1931	No
81	Kifc3	12005	-0.214	-0.1968	No
82	Adam12	12081	-0.218	-0.1947	No
83	Tpd52l1	12318	-0.232	-0.2018	Yes
84	Tpm3	12350	-0.234	-0.1965	Yes
85	Pcx	12425	-0.238	-0.1937	Yes
86	Myl4	12491	-0.241	-0.1902	Yes
87	Ctf1	12576	-0.245	-0.1877	Yes
88	Sirt2	12617	-0.246	-0.1826	Yes
89	Actn2	12654	-0.248	-0.1771	Yes
90	Csrp3	12674	-0.249	-0.1706	Yes
91	Igf1	12790	-0.258	-0.1697	Yes
92	Tpm2	13126	-0.276	-0.1814	Yes
93	Gadd45b	13143	-0.278	-0.1738	Yes
94	Gpx3	13146	-0.279	-0.1654	Yes
95	Ablim1	13226	-0.285	-0.1614	Yes
96	Ache	13620	-0.315	-0.1755	Yes
97	Dmd	13635	-0.316	-0.1667	Yes
98	Prnp	13696	-0.321	-0.1604	Yes
99	Pygm	13838	-0.332	-0.1588	Yes
100	Eno3	14295	-0.373	-0.1748	Yes
101	Sorbs3	14327	-0.376	-0.1652	Yes
102	Kcnh2	14424	-0.386	-0.1591	Yes
103	Cd36	14538	-0.395	-0.1538	Yes
104	Mylk	14691	-0.414	-0.1503	Yes
105	Plxnb2	14718	-0.417	-0.1391	Yes
106	Atp6ap1	14769	-0.422	-0.1292	Yes
107	Nav2	14888	-0.434	-0.1230	Yes
108	Fgf2	14941	-0.439	-0.1127	Yes
109	Mybpc3	14947	-0.440	-0.0995	Yes
110	Bag1	15175	-0.464	-0.0990	Yes
111	Ptp4a3	15240	-0.472	-0.0883	Yes
112	Syngr2	15321	-0.482	-0.0784	Yes
113	Smtn	15352	-0.486	-0.0653	Yes
114	Sgcd	15536	-0.512	-0.0606	Yes
115	Schip1	15656	-0.534	-0.0514	Yes
116	Mras	15976	-0.609	-0.0520	Yes
117	Nqo1	16137	-0.654	-0.0416	Yes
118	Cryab	16354	-0.723	-0.0324	Yes
119	Cnn3	16459	-0.790	-0.0145	Yes
120	Mef2c	16609	-0.942	0.0054	Yes