DatasetBasophil.Basophil_Pheno.cls
#Group1_versus_Group3.Basophil_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)0.2331809
Normalized Enrichment Score (NES)1.0769279
Nominal p-value0.3392157
FDR q-value0.5327527
FWER p-Value0.982
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Nlrp3141.0070.0266Yes
2Ptgir180.9790.0530Yes
3Rnf144b520.8500.0742Yes
4Gpr183940.7790.0929Yes
5Csf12790.6280.0989Yes
6P2rx74120.5720.1065Yes
7Kcnj24220.5690.1214Yes
8Sgms24270.5670.1366Yes
9Slc31a25280.5380.1452Yes
10Tnfrsf1b7380.4810.1457Yes
11Rgs17390.4810.1588Yes
12Klf68180.4670.1668Yes
13Adora2b9170.4540.1732Yes
14Il18rap9490.4480.1836Yes
15Osm12040.4110.1794Yes
16Nod212480.4060.1879Yes
17Il1812800.4020.1969Yes
18Cd6913880.3880.2010Yes
19Atp2b115650.3700.2005Yes
20Kif1b17500.3510.1989Yes
21Met17670.3480.2074Yes
22Lcp218970.3370.2088Yes
23Ldlr19250.3350.2163Yes
24Ptger219740.3300.2224Yes
25Aqp919890.3290.2305Yes
26Cd8221870.3130.2272Yes
27Olr122280.3100.2332Yes
28Abi126330.2790.2164No
29Gnai326760.2760.2214No
30Itgb327840.2690.2222No
31Slc4a428010.2680.2286No
32Tacr328540.2630.2326No
33Btg229760.2530.2322No
34Atp2c131380.2410.2290No
35Hbegf32550.2330.2284No
36Ripk232950.2310.2323No
37Tnfrsf936250.2090.2181No
38Gabbr139090.1930.2063No
39Axl40570.1840.2024No
40Raf142890.1710.1931No
41Hif1a43240.1690.1957No
42Il1545470.1570.1866No
43Gp1ba46550.1510.1842No
44Gpc349290.1360.1714No
45Fzd549730.1340.1725No
46Psen150720.1280.1700No
47Scn1b50970.1270.1720No
48Cdkn1a56710.0990.1401No
49Il18r158080.0930.1344No
50Rtp459170.0880.1303No
51P2ry260300.0820.1258No
52Sphk161010.0780.1237No
53Atp2a261060.0780.1255No
54Dcbld262450.0700.1191No
55Kcnmb263630.0650.1138No
56Ptafr64190.0620.1122No
57Icosl64920.0580.1094No
58Il666910.0480.0987No
59Adrm167030.0470.0994No
60Il7r68280.0420.0930No
61Tapbp71280.0260.0757No
62Sele74380.0110.0573No
63Myc75010.0090.0538No
64Mefv75430.0070.0515No
65Hpn7944-0.0080.0276No
66Adgre17946-0.0080.0278No
67P2rx47948-0.0080.0279No
68Abca17954-0.0080.0279No
69Pik3r58036-0.0130.0233No
70Slc7a18125-0.0170.0185No
71Sell8126-0.0170.0189No
72Pcdh78183-0.0190.0161No
73Sema4d8312-0.0260.0091No
74Irf18428-0.0310.0030No
75Gch18532-0.036-0.0023No
76Bst29234-0.070-0.0427No
77Il15ra9332-0.075-0.0465No
78Rela9358-0.076-0.0459No
79Hrh19377-0.077-0.0449No
80Acvr2a9379-0.077-0.0429No
81Lck9747-0.095-0.0624No
82Ahr9786-0.098-0.0621No
83Eif2ak29858-0.101-0.0636No
84Nmi9899-0.103-0.0632No
85Cybb9913-0.104-0.0612No
86Nfkb110110-0.114-0.0699No
87Cxcr610493-0.132-0.0894No
88C3ar110496-0.132-0.0859No
89Scarf110570-0.135-0.0867No
90Slamf110573-0.135-0.0831No
91Ffar210755-0.146-0.0900No
92Ptpre10800-0.149-0.0886No
93Mxd110871-0.152-0.0887No
94Cmklr111046-0.163-0.0948No
95Sri11134-0.167-0.0955No
96Selenos11398-0.180-0.1065No
97Lpar111436-0.182-0.1037No
98Il4ra11491-0.185-0.1020No
99Plaur11578-0.191-0.1020No
100Kcna311666-0.195-0.1019No
101Mmp1411701-0.198-0.0986No
102Irf711808-0.203-0.0995No
103Acvr1b11855-0.205-0.0967No
104Pde4b11868-0.206-0.0918No
105Ifnar111877-0.206-0.0866No
106Il10ra12196-0.226-0.0997No
107Ifngr212269-0.230-0.0978No
108Itga512334-0.233-0.0953No
109Tnfsf1012505-0.241-0.0990No
110Ifitm112542-0.244-0.0946No
111Ros112650-0.248-0.0942No
112Nfkbia12665-0.249-0.0883No
113Ly6e12686-0.251-0.0827No
114Clec5a12733-0.254-0.0786No
115Lyn12984-0.267-0.0864No
116Ptger412995-0.268-0.0797No
117Gpr13213213-0.284-0.0851No
118Pvr13323-0.292-0.0837No
119Irak213394-0.297-0.0798No
120Slc31a113648-0.316-0.0865No
121Gna1513719-0.324-0.0819No
122Icam413871-0.334-0.0819No
123Cd4814316-0.375-0.0985No
124Stab114368-0.381-0.0912No
125Ebi314414-0.384-0.0835No
126Rhog14796-0.425-0.0949No
127Ccrl214927-0.437-0.0908No
128Slc28a214940-0.438-0.0796No
129Slc11a215103-0.457-0.0770No
130Icam115183-0.466-0.0691No
131Emp315564-0.518-0.0779No
132Nampt15653-0.534-0.0687No
133Csf3r16009-0.618-0.0733No
134Tnfsf916157-0.658-0.0643No
135Il1016183-0.664-0.0477No
136Il1r116330-0.713-0.0371No
137Calcrl16614-0.948-0.0284No
138Tlr216684-1.2280.0009No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE