Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group3.Basophil_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	0.26282036
Normalized Enrichment Score (NES)	1.1202363
Nominal p-value	0.25754526
FDR q-value	0.5432794
FWER p-Value	0.964

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ets1	24	0.955	0.0234	Yes
2	Ppp1r15a	56	0.846	0.0436	Yes
3	Dusp1	86	0.795	0.0626	Yes
4	Btg1	88	0.793	0.0832	Yes
5	Hspa5	183	0.677	0.0951	Yes
6	Pfkp	213	0.661	0.1106	Yes
7	Fosl2	214	0.660	0.1278	Yes
8	Fos	355	0.590	0.1348	Yes
9	Hdlbp	376	0.585	0.1488	Yes
10	Ero1a	378	0.584	0.1640	Yes
11	Vhl	521	0.539	0.1694	Yes
12	Hk2	614	0.514	0.1773	Yes
13	Ids	728	0.482	0.1830	Yes
14	Ccng2	795	0.471	0.1913	Yes
15	Klf6	818	0.467	0.2022	Yes
16	Myh9	896	0.457	0.2094	Yes
17	Adora2b	917	0.454	0.2201	Yes
18	Jun	933	0.451	0.2309	Yes
19	Pgk1	1008	0.437	0.2378	Yes
20	Prkca	1183	0.413	0.2381	Yes
21	Nfil3	1285	0.401	0.2424	Yes
22	Wsb1	1329	0.396	0.2501	Yes
23	Cdkn1c	1463	0.381	0.2520	Yes
24	Slc37a4	1798	0.345	0.2408	Yes
25	Hs3st1	1887	0.338	0.2443	Yes
26	Gpi1	1932	0.334	0.2504	Yes
27	Siah2	2099	0.321	0.2487	Yes
28	Isg20	2108	0.320	0.2566	Yes
29	Ndst1	2270	0.307	0.2548	Yes
30	Tnfaip3	2271	0.306	0.2628	Yes
31	Cavin3	2543	0.285	0.2539	No
32	Vldlr	2664	0.277	0.2539	No
33	Klf7	2828	0.266	0.2509	No
34	Anxa2	3083	0.244	0.2420	No
35	Cav1	3116	0.242	0.2463	No
36	Aldoa	3339	0.227	0.2388	No
37	Pgm1	3411	0.222	0.2404	No
38	Ampd3	3458	0.220	0.2433	No
39	Noct	3480	0.219	0.2477	No
40	Ddit4	3648	0.208	0.2431	No
41	Ndst2	4070	0.183	0.2224	No
42	Errfi1	4135	0.179	0.2232	No
43	Atp7a	4176	0.177	0.2254	No
44	Nedd4l	4301	0.171	0.2224	No
45	Xpnpep1	4473	0.161	0.2162	No
46	Gpc4	4531	0.158	0.2169	No
47	Scarb1	4698	0.148	0.2107	No
48	Vegfa	4832	0.141	0.2064	No
49	Gpc3	4929	0.136	0.2041	No
50	Pklr	4968	0.134	0.2053	No
51	Foxo3	4999	0.133	0.2070	No
52	Pfkfb3	5124	0.125	0.2027	No
53	Bcl2	5238	0.119	0.1990	No
54	Casp6	5427	0.112	0.1906	No
55	Ppfia4	5534	0.106	0.1869	No
56	Eno1b	5567	0.105	0.1878	No
57	Cdkn1a	5671	0.099	0.1841	No
58	Tpd52	5859	0.091	0.1752	No
59	Ilvbl	6269	0.069	0.1523	No
60	Ldhc	6344	0.066	0.1495	No
61	Kdm3a	6370	0.064	0.1497	No
62	Ak4	6413	0.062	0.1487	No
63	Cp	6507	0.057	0.1446	No
64	Il6	6691	0.048	0.1348	No
65	Ext1	6834	0.041	0.1273	No
66	Bhlhe40	6841	0.041	0.1280	No
67	Slc2a3	6865	0.039	0.1276	No
68	Ier3	6875	0.039	0.1281	No
69	Mxi1	6898	0.038	0.1278	No
70	Jmjd6	7033	0.031	0.1205	No
71	Gpc1	7258	0.020	0.1075	No
72	Phkg1	7309	0.018	0.1049	No
73	P4ha1	7375	0.014	0.1014	No
74	Nr3c1	7533	0.008	0.0921	No
75	Gaa	7545	0.007	0.0916	No
76	Cxcr4	7830	-0.003	0.0745	No
77	Cdkn1b	7942	-0.008	0.0680	No
78	Hexa	8064	-0.014	0.0611	No
79	Irs2	8368	-0.029	0.0435	No
80	Rora	8513	-0.035	0.0357	No
81	Sap30	8609	-0.040	0.0311	No
82	Pam	8908	-0.054	0.0144	No
83	Tiparp	9001	-0.058	0.0104	No
84	Pfkl	9184	-0.067	0.0012	No
85	Zfp292	9248	-0.070	-0.0008	No
86	Prdx5	9258	-0.071	0.0005	No
87	Galk1	9360	-0.077	-0.0036	No
88	Ankzf1	9483	-0.082	-0.0088	No
89	Rbpj	9586	-0.087	-0.0127	No
90	Pnrc1	9619	-0.088	-0.0124	No
91	Gys1	9663	-0.091	-0.0126	No
92	Akap12	9696	-0.092	-0.0121	No
93	B3galt6	9742	-0.095	-0.0124	No
94	Aldoc	9880	-0.102	-0.0180	No
95	B4galnt2	10162	-0.117	-0.0320	No
96	Pim1	10246	-0.120	-0.0338	No
97	Col5a1	10288	-0.122	-0.0331	No
98	Lxn	10347	-0.125	-0.0334	No
99	Klhl24	10534	-0.134	-0.0411	No
100	Csrp2	10893	-0.153	-0.0588	No
101	Tgfbi	11008	-0.160	-0.0615	No
102	Plin2	11080	-0.165	-0.0615	No
103	Ugp2	11156	-0.168	-0.0616	No
104	Cavin1	11226	-0.172	-0.0613	No
105	Gbe1	11301	-0.175	-0.0612	No
106	Tes	11383	-0.180	-0.0614	No
107	Grhpr	11453	-0.183	-0.0608	No
108	Plaur	11578	-0.191	-0.0634	No
109	Ldha	11723	-0.199	-0.0669	No
110	Large1	11821	-0.204	-0.0674	No
111	Sult2b1	11941	-0.211	-0.0691	No
112	Slc25a1	12001	-0.214	-0.0671	No
113	Slc2a1	12051	-0.217	-0.0644	No
114	Tpi1	12321	-0.232	-0.0746	No
115	Pdk1	12731	-0.254	-0.0927	No
116	Plac8	12742	-0.255	-0.0867	No
117	Kif5a	12801	-0.259	-0.0834	No
118	Nagk	12915	-0.264	-0.0834	No
119	Glrx	12921	-0.264	-0.0768	No
120	Sdc3	12991	-0.268	-0.0740	No
121	Gcnt2	13001	-0.269	-0.0675	No
122	Pdgfb	13006	-0.269	-0.0608	No
123	Mt1	13048	-0.271	-0.0562	No
124	Zfp36	13218	-0.284	-0.0590	No
125	Pdk3	13237	-0.285	-0.0526	No
126	Slc6a6	13316	-0.292	-0.0497	No
127	Cited2	13317	-0.292	-0.0421	No
128	Hmox1	13340	-0.293	-0.0358	No
129	Bnip3l	13445	-0.301	-0.0342	No
130	Hk1	13622	-0.315	-0.0367	No
131	Car12	13647	-0.316	-0.0299	No
132	Pygm	13838	-0.332	-0.0327	No
133	Eno3	14295	-0.373	-0.0505	No
134	Mif	14306	-0.374	-0.0414	No
135	Fam162a	14311	-0.375	-0.0318	No
136	Fbp1	14850	-0.430	-0.0531	No
137	Gapdhs	14932	-0.438	-0.0466	No
138	Ndrg1	14958	-0.441	-0.0366	No
139	Pgm2	14993	-0.445	-0.0271	No
140	Map3k1	15092	-0.456	-0.0211	No
141	Tpst2	15171	-0.464	-0.0137	No
142	Ddit3	15239	-0.472	-0.0055	No
143	Bgn	15511	-0.508	-0.0086	No
144	Selenbp1	15690	-0.542	-0.0052	No
145	Tgm2	15888	-0.583	-0.0019	No
146	Sdc2	15954	-0.603	0.0098	No
147	Angptl4	16144	-0.655	0.0155	No
148	Maff	16247	-0.689	0.0273	No