DatasetBasophil.Basophil_Pheno.cls
#Group1_versus_Group3.Basophil_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.20074011
Normalized Enrichment Score (NES)0.8010991
Nominal p-value0.6592292
FDR q-value0.79676634
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hnrnpd3990.575-0.0100Yes
2Lbr4140.5710.0033Yes
3Chaf1a4180.5700.0172Yes
4Kpnb15570.5280.0219Yes
5Lmnb15760.5230.0337Yes
6Cul16380.5070.0425Yes
7Prmt57100.4880.0503Yes
8Tfdp110390.4330.0411Yes
9Ddx39a10440.4330.0516Yes
10Cul511090.4220.0581Yes
11Hspa812570.4040.0592Yes
12Rad2113670.3910.0623Yes
13E2f215860.3670.0581Yes
14Dtymk15910.3670.0670Yes
15Syncrip17460.3510.0663Yes
16Hnrnpu18000.3450.0716Yes
17Rad23b19590.3310.0702Yes
18Chek120020.3280.0758Yes
19Cdc721470.3160.0749Yes
20Pole21490.3160.0826Yes
21Suv39h121510.3160.0904Yes
22Racgap121680.3150.0972Yes
23Pbk22210.3100.1017Yes
24Cdc2722290.3100.1089Yes
25Cdc25a22740.3060.1138Yes
26Mcm322980.3050.1199Yes
27Mcm223800.2970.1224Yes
28Casp8ap223900.2960.1292Yes
29Mcm624040.2960.1357Yes
30Kif2224150.2950.1424Yes
31Smc1a24330.2940.1486Yes
32Stil24690.2900.1536Yes
33Cdk125840.2830.1537Yes
34Xpo125870.2830.1606Yes
35Cdc4526180.2800.1657Yes
36Nsd227180.2730.1665Yes
37Numa127230.2730.1730Yes
38Pds5b28110.2670.1743Yes
39Mtf229430.2550.1726Yes
40Incenp29840.2520.1765Yes
41Cdc630990.2430.1756Yes
42Tle332020.2370.1752Yes
43Cdc25b32340.2340.1791Yes
44Odf233380.2270.1785Yes
45H2bc1233510.2270.1834Yes
46Nup5033720.2250.1877Yes
47Mad2l134380.2210.1893Yes
48Notch234680.2190.1929Yes
49Rps6ka534700.2190.1982Yes
50Cdkn2c35180.2160.2007Yes
51Kif5b38100.1990.1880No
52Prpf4b38800.1940.1887No
53Top2a38990.1940.1923No
54Upf140080.1870.1904No
55Rbl140840.1820.1904No
56Hira42660.1730.1837No
57E2f142770.1720.1874No
58Hif1a43240.1690.1887No
59Hmmr44600.1610.1846No
60G3bp144690.1610.1880No
61Pola245240.1580.1887No
62Ccnt145740.1550.1895No
63Stag147240.1470.1841No
64Nolc147540.1450.1860No
65Wrn48410.1410.1842No
66Cenpe49050.1380.1838No
67Tmpo50490.1300.1784No
68Bub151190.1260.1773No
69Ythdc151230.1250.1802No
70Kif2c51660.1230.1807No
71Aurkb52010.1210.1816No
72Smc452330.1190.1827No
73Smad352730.1170.1832No
74Slc38a152750.1170.1861No
75Rad54l53180.1150.1864No
76Slc7a553880.1140.1850No
77Espl154190.1120.1859No
78Arid4a54540.1110.1866No
79Tnpo255010.1090.1865No
80Lig355740.1050.1847No
81Nasp55950.1040.1861No
82Aurka56100.1030.1878No
83Ccna256300.1010.1891No
84Fbxo557040.0980.1871No
85Mki6757150.0970.1889No
86E2f457240.0970.1908No
87Mnat157540.0950.1914No
88Ilf357640.0950.1932No
89Kif1158210.0920.1921No
90Ccnf60000.0830.1833No
91Cenpf60090.0830.1849No
92Gspt160150.0820.1866No
93Cul361320.0770.1815No
94Kif461350.0770.1833No
95Srsf262280.0720.1795No
96Rpa262750.0680.1784No
97Kif2362770.0680.1800No
98Marcks63540.0650.1770No
99Tra2b63560.0650.1786No
100Smc263730.0640.1792No
101Mybl264620.0590.1753No
102Mapk1464890.0580.1752No
103Ewsr165000.0570.1760No
104Sfpq65700.0530.1731No
105Pafah1b166160.0510.1716No
106Smarcc166330.0510.1719No
107Plk166580.0490.1717No
108Ttk67690.0440.1661No
109Kif20b67700.0440.1672No
110Atrx67770.0440.1679No
111Prim268320.0410.1657No
112Myc75010.0090.1254No
113Abl175850.0060.1205No
114Odc175870.0060.1206No
115Top17831-0.0030.1060No
116Cks27906-0.0060.1017No
117Cdkn1b7942-0.0080.0997No
118Nek28051-0.0140.0935No
119Kmt5a8086-0.0150.0918No
120Slc7a18125-0.0170.0900No
121Cul4a8251-0.0230.0830No
122Uck28266-0.0240.0827No
123Rasal28277-0.0240.0827No
124Mcm58424-0.0310.0746No
125Tacc38443-0.0320.0743No
126Kif158446-0.0320.0750No
127Ccnb28561-0.0380.0690No
128Cbx18563-0.0380.0699No
129Srsf18577-0.0380.0701No
130Ncl8578-0.0390.0710No
131Sap308609-0.0400.0702No
132Orc58710-0.0440.0652No
133Prc18747-0.0460.0642No
134Ctcf8917-0.0540.0553No
135Nup988938-0.0550.0554No
136Ndc809114-0.0640.0464No
137Chmp1a9262-0.0710.0392No
138Bard19350-0.0760.0358No
139Atf59356-0.0760.0374No
140Pml9518-0.0840.0297No
141Ss189635-0.0890.0249No
142Brca29796-0.0980.0177No
143Troap9900-0.1030.0140No
144Exo19972-0.1070.0123No
145Ezh210096-0.1130.0076No
146Fancc10219-0.1190.0032No
147Dbf410353-0.126-0.0018No
148H2az110372-0.1270.0003No
149Polq10546-0.134-0.0069No
150Egf10571-0.135-0.0050No
151Tent4a10615-0.137-0.0042No
152Ube2c10944-0.156-0.0202No
153Srsf1010947-0.157-0.0165No
154E2f310991-0.159-0.0151No
155Tgfb111190-0.170-0.0229No
156Jpt111247-0.173-0.0221No
157Traip11376-0.179-0.0254No
158Pttg111532-0.188-0.0301No
159Knl111861-0.205-0.0449No
160Dr111907-0.208-0.0425No
161Stmn111957-0.212-0.0402No
162Cks1b12058-0.217-0.0409No
163Plk412084-0.219-0.0370No
164Hmga1b12694-0.251-0.0677No
165Map3k2012739-0.255-0.0641No
166Tpx212759-0.256-0.0589No
167H2ax12896-0.264-0.0607No
168Bub313050-0.271-0.0632No
169Foxn313140-0.278-0.0618No
170Katna113611-0.314-0.0825No
171Dmd13635-0.316-0.0761No
172Snrpd113712-0.323-0.0727No
173Gins213724-0.324-0.0654No
174Cdkn313746-0.326-0.0586No
175Slc12a214302-0.373-0.0830No
176Hmgb314315-0.375-0.0744No
177H2az214465-0.388-0.0739No
178Cdk414604-0.404-0.0723No
179Dkc114981-0.443-0.0841No
180Bcl315026-0.449-0.0757No
181Hus115085-0.455-0.0680No
182Nusap115623-0.528-0.0874No
183Amd115636-0.530-0.0751No
184Ccnd115695-0.543-0.0652No
185Cdc2015770-0.559-0.0558No
186Pura15800-0.565-0.0436No
187Ube2s15953-0.603-0.0380No
188Cenpa16149-0.657-0.0335No
189Sqle16170-0.660-0.0185No
190Orc616210-0.673-0.0042No
191Meis116229-0.6800.0115No
192Birc516235-0.6840.0281No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT