DatasetBasophil.Basophil_Pheno.cls
#Group1_versus_Group3.Basophil_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.2460374
Normalized Enrichment Score (NES)0.9821877
Nominal p-value0.46506986
FDR q-value0.6058457
FWER p-Value0.994
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Rrm22190.6590.0011Yes
2Zw103500.5920.0062Yes
3Hnrnpd3990.5750.0159Yes
4Lbr4140.5710.0275Yes
5Lmnb15760.5230.0292Yes
6Tcf198080.4680.0255Yes
7Asf1b9080.4550.0294Yes
8Donson9680.4450.0356Yes
9Ddx39a10440.4330.0405Yes
10Nbn10470.4320.0498Yes
11Mcm410520.4310.0590Yes
12Cdkn2a10720.4270.0672Yes
13Brms1l10970.4240.0750Yes
14Anp32e11400.4180.0816Yes
15Rad2113670.3910.0765Yes
16Dnmt114230.3850.0816Yes
17Brca114360.3840.0892Yes
18Psmc3ip15950.3670.0877Yes
19Dlgap516620.3600.0916Yes
20Pan216650.3600.0993Yes
21Spag517100.3550.1044Yes
22Melk17350.3520.1107Yes
23Syncrip17460.3510.1177Yes
24Atad217830.3470.1231Yes
25Msh218930.3370.1239Yes
26Timeless19520.3320.1276Yes
27Chek120020.3280.1319Yes
28Smc321330.3180.1309Yes
29Pole21490.3160.1369Yes
30Suv39h121510.3160.1438Yes
31Racgap121680.3150.1497Yes
32Mcm722000.3120.1546Yes
33Asf1a22100.3110.1609Yes
34Mre11a22470.3080.1655Yes
35Cdc25a22740.3060.1706Yes
36Mcm322980.3050.1759Yes
37Mthfd223120.3030.1817Yes
38Rbbp723720.2980.1846Yes
39Mcm223800.2970.1907Yes
40Pcna23820.2970.1972Yes
41Mcm624040.2960.2024Yes
42Kif2224150.2950.2082Yes
43Smc1a24330.2940.2136Yes
44Cdk125840.2830.2107Yes
45Xpo125870.2830.2168Yes
46Ppm1d26720.2760.2177Yes
47Pds5b28110.2670.2152Yes
48Cse1l28860.2600.2164Yes
49Rad51ap128870.2600.2221Yes
50Ccp11029020.2580.2269Yes
51Mlh131180.2420.2192Yes
52Cit31330.2410.2236Yes
53Pold331560.2400.2275Yes
54Cdc25b32340.2340.2280Yes
55Eif2s132810.2320.2303Yes
56Mms22l33930.2240.2284Yes
57Mad2l134380.2210.2306Yes
58Cdkn2c35180.2160.2305Yes
59Nup15335210.2160.2351Yes
60Slbp35940.2110.2354Yes
61Ubr735980.2110.2398Yes
62Nup10736150.2100.2434Yes
63Usp138230.1980.2352Yes
64Dctpp138690.1950.2368Yes
65Top2a38990.1940.2393Yes
66Ccne139000.1940.2435Yes
67Wee139910.1880.2422Yes
68Cdca839960.1880.2460Yes
69Pnn42610.1730.2338No
70Hells43760.1660.2306No
71Hmmr44600.1610.2291No
72Pola245240.1580.2287No
73Eed46160.1530.2265No
74Rad146370.1520.2286No
75Stag147240.1470.2266No
76Diaph347270.1460.2297No
77Nolc147540.1450.2313No
78Cenpe49050.1380.2252No
79Prkdc49910.1330.2230No
80Tmpo50490.1300.2224No
81Rfc150710.1280.2239No
82Kif2c51660.1230.2209No
83Kif18b51710.1230.2234No
84Aurkb52010.1210.2242No
85Smc452330.1190.2250No
86Espl154190.1120.2162No
87Depdc1a54910.1090.2143No
88Smc655550.1060.2128No
89Nasp55950.1040.2127No
90Aurka56100.1030.2141No
91Lig156260.1020.2154No
92Ncapd256640.0990.2154No
93Cdkn1a56710.0990.2172No
94Mki6757150.0970.2167No
95Ilf357640.0950.2158No
96Dut59180.0880.2085No
97Wdr9059540.0860.2082No
98Gspt160150.0820.2064No
99Rad51c61180.0770.2019No
100Kif461350.0770.2026No
101Srsf262280.0720.1986No
102Rpa262750.0680.1973No
103Tra2b63560.0650.1939No
104Mybl264620.0590.1888No
105Ipo765100.0570.1872No
106Tbrg466420.0500.1804No
107Plk166580.0490.1805No
108Lyar68050.0430.1726No
109Prim268320.0410.1720No
110Prdx469230.0370.1673No
111Cnot969240.0370.1681No
112Gins370460.0300.1615No
113Nme170640.0290.1611No
114Dek71290.0260.1578No
115Dscc172400.0210.1516No
116Nap1l173180.0170.1473No
117E2f873260.0170.1472No
118Ssrp173310.0160.1473No
119Myc75010.0090.1373No
120Ak276880.0020.1260No
121Cks27906-0.0060.1130No
122Cdkn1b7942-0.0080.1111No
123Hmgb27967-0.0090.1098No
124Tubg18015-0.0120.1072No
125Bub1b8060-0.0140.1049No
126Tubb58097-0.0160.1030No
127Cbx58194-0.0200.0977No
128Luc7l38226-0.0210.0963No
129Dclre1b8248-0.0230.0955No
130Mcm58424-0.0310.0856No
131Tacc38443-0.0320.0852No
132Rpa18451-0.0330.0855No
133Cdca38501-0.0350.0832No
134Ccnb28561-0.0380.0805No
135Srsf18577-0.0380.0804No
136Ctcf8917-0.0540.0611No
137Rad509023-0.0590.0560No
138Psip19346-0.0760.0381No
139Bard19350-0.0760.0396No
140Shmt19447-0.0800.0355No
141Pa2g49505-0.0830.0339No
142Xrcc69525-0.0840.0346No
143Rpa39730-0.0940.0243No
144Tipin9792-0.0980.0227No
145Brca29796-0.0980.0247No
146Nudt2110004-0.1080.0145No
147Ezh210096-0.1130.0115No
148Pold210126-0.1150.0123No
149Trp5310157-0.1160.0130No
150Orc210185-0.1180.0139No
151H2az110372-0.1270.0054No
152Rnaseh2a10598-0.137-0.0052No
153Spc2510639-0.139-0.0046No
154Prps111047-0.163-0.0257No
155Jpt111247-0.173-0.0340No
156Pttg111532-0.188-0.0471No
157Nup20511592-0.191-0.0465No
158Trip1311640-0.194-0.0451No
159Pold111702-0.198-0.0444No
160Pms211843-0.205-0.0484No
161Rfc211919-0.209-0.0484No
162Stmn111957-0.212-0.0460No
163Exosc812049-0.216-0.0468No
164Ppp1r812050-0.216-0.0421No
165Cks1b12058-0.217-0.0377No
166Plk412084-0.219-0.0345No
167Tfrc12102-0.220-0.0307No
168Paics12521-0.243-0.0507No
169Ranbp112574-0.245-0.0485No
170Lsm812643-0.248-0.0472No
171Hmga1b12694-0.251-0.0447No
172H2ax12896-0.264-0.0512No
173Nop5613299-0.291-0.0692No
174Cdkn313746-0.326-0.0891No
175Chek213750-0.326-0.0821No
176Mxd314051-0.349-0.0926No
177Tk114104-0.354-0.0881No
178Ran14122-0.355-0.0813No
179Phf5a14168-0.360-0.0762No
180Dck14245-0.368-0.0727No
181Hmgb314315-0.375-0.0687No
182Pop714467-0.388-0.0693No
183Spc2414545-0.396-0.0654No
184Cdk414604-0.404-0.0600No
185Rfc314607-0.404-0.0513No
186Hus115085-0.455-0.0703No
187Snrpb15341-0.484-0.0751No
188Gins415608-0.526-0.0797No
189Ing315728-0.548-0.0750No
190Cdc2015770-0.559-0.0652No
191Gins115852-0.576-0.0575No
192Ube2s15953-0.603-0.0504No
193Orc616210-0.673-0.0512No
194Ube2t16224-0.678-0.0371No
195Ung16225-0.679-0.0223No
196Birc516235-0.684-0.0079No
197Pole416274-0.6980.0051No
198Cenpm16608-0.9410.0055No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS