Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group3.Basophil_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.19853787
Normalized Enrichment Score (NES)	-0.947728
Nominal p-value	0.60998154
FDR q-value	1.0
FWER p-Value	0.998

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Rce1	158	0.699	0.0093	No
2	Hspa5	183	0.677	0.0260	No
3	Ehd1	209	0.663	0.0424	No
4	Jak2	289	0.622	0.0543	No
5	Ppp2cb	495	0.547	0.0567	No
6	Hspa1a	633	0.509	0.0621	No
7	Pdp1	682	0.496	0.0726	No
8	Sirt6	796	0.471	0.0784	No
9	Brpf3	921	0.453	0.0831	No
10	Dgkg	1064	0.428	0.0861	No
11	Itgam	1069	0.427	0.0973	No
12	Gzmb	1213	0.410	0.0997	No
13	Kif2a	1331	0.396	0.1033	No
14	Plek	1400	0.388	0.1096	No
15	Msrb1	1438	0.383	0.1177	No
16	Gca	1689	0.356	0.1122	No
17	Gmfb	1738	0.352	0.1187	No
18	Lcp2	1897	0.337	0.1183	No
19	Timp2	2069	0.324	0.1166	No
20	Kcnip2	2140	0.317	0.1209	No
21	F10	2162	0.315	0.1281	No
22	Olr1	2228	0.310	0.1326	No
23	Tnfaip3	2271	0.306	0.1383	No
24	Rbsn	2327	0.302	0.1431	No
25	Ctsh	2354	0.300	0.1496	No
26	Cpm	2394	0.296	0.1552	No
27	Gnai3	2676	0.276	0.1456	No
28	Prdm4	2792	0.269	0.1459	No
29	Cebpb	2815	0.267	0.1518	No
30	Fyn	3172	0.239	0.1367	No
31	S100a13	3218	0.235	0.1403	No
32	Col4a2	3697	0.205	0.1169	No
33	Ctsl	3728	0.203	0.1206	No
34	C3	3814	0.199	0.1208	No
35	Casp1	3998	0.188	0.1148	No
36	Cdk5r1	4107	0.181	0.1131	No
37	Raf1	4289	0.171	0.1068	No
38	Rnf4	4467	0.161	0.1005	No
39	Xpnpep1	4473	0.161	0.1045	No
40	Prkcd	4623	0.152	0.0996	No
41	Gp1ba	4655	0.151	0.1018	No
42	Ctsc	4860	0.140	0.0932	No
43	Lamp2	4995	0.133	0.0887	No
44	Psen1	5072	0.128	0.0875	No
45	Casp3	5175	0.123	0.0847	No
46	Pik3cg	5200	0.121	0.0865	No
47	Gng2	5302	0.116	0.0835	No
48	F5	5309	0.116	0.0862	No
49	Lgmn	5332	0.115	0.0880	No
50	Cfb	5359	0.115	0.0895	No
51	Gp9	5471	0.110	0.0858	No
52	Ppp4c	5599	0.103	0.0809	No
53	Gnai2	5615	0.103	0.0827	No
54	F7	5738	0.096	0.0779	No
55	Plg	5740	0.096	0.0804	No
56	Cdh13	5947	0.086	0.0703	No
57	Src	6001	0.083	0.0694	No
58	Gpd2	6011	0.083	0.0710	No
59	Was	6071	0.080	0.0696	No
60	Cp	6507	0.057	0.0449	No
61	Mmp8	6512	0.057	0.0461	No
62	Il6	6691	0.048	0.0367	No
63	Grb2	6693	0.048	0.0379	No
64	Usp15	7052	0.030	0.0171	No
65	Usp8	7127	0.026	0.0133	No
66	Lta4h	7130	0.026	0.0139	No
67	C2	7179	0.024	0.0117	No
68	Dusp5	7280	0.019	0.0061	No
69	Fcer1g	7320	0.017	0.0042	No
70	Spock2	7356	0.015	0.0025	No
71	Dusp6	7357	0.015	0.0029	No
72	Cblb	7531	0.008	-0.0073	No
73	L3mbtl4	7747	0.000	-0.0203	No
74	Dgkh	7862	-0.004	-0.0271	No
75	Pik3r5	8036	-0.013	-0.0372	No
76	Dock10	8061	-0.014	-0.0382	No
77	Lrp1	8170	-0.019	-0.0443	No
78	Fn1	8326	-0.027	-0.0529	No
79	Prss36	8373	-0.029	-0.0549	No
80	Irf1	8428	-0.031	-0.0573	No
81	Akap10	8535	-0.036	-0.0628	No
82	Fdx1	8638	-0.042	-0.0678	No
83	Lgals3	8749	-0.046	-0.0732	No
84	Pik3ca	8786	-0.048	-0.0741	No
85	Pla2g4a	8856	-0.051	-0.0769	No
86	Gnb2	9235	-0.070	-0.0979	No
87	C1qa	9516	-0.084	-0.1125	No
88	Csrp1	9548	-0.085	-0.1121	No
89	Phex	9601	-0.087	-0.1129	No
90	Lck	9747	-0.095	-0.1191	No
91	Prcp	9904	-0.103	-0.1258	No
92	Serpinc1	9958	-0.106	-0.1261	No
93	Dpp4	9992	-0.107	-0.1252	No
94	Cd46	10206	-0.118	-0.1349	No
95	Pim1	10246	-0.120	-0.1340	No
96	Zeb1	10415	-0.129	-0.1407	No
97	Vcpip1	10549	-0.135	-0.1451	No
98	Calm1	10575	-0.135	-0.1430	No
99	Dock9	11455	-0.183	-0.1912	No
100	Plaur	11578	-0.191	-0.1934	Yes
101	Casp4	11617	-0.193	-0.1905	Yes
102	Mmp14	11701	-0.198	-0.1902	Yes
103	S100a9	11759	-0.201	-0.1883	Yes
104	Adam9	11776	-0.201	-0.1838	Yes
105	Irf7	11808	-0.203	-0.1802	Yes
106	Ctsb	11842	-0.205	-0.1767	Yes
107	Rabif	11858	-0.205	-0.1721	Yes
108	Ctsd	12236	-0.228	-0.1887	Yes
109	Casp9	12301	-0.231	-0.1864	Yes
110	Lipa	12456	-0.240	-0.1892	Yes
111	Dyrk2	12589	-0.246	-0.1906	Yes
112	Cr2	12639	-0.248	-0.1869	Yes
113	Actn2	12654	-0.248	-0.1811	Yes
114	Psmb9	12755	-0.256	-0.1802	Yes
115	Usp16	12898	-0.264	-0.1817	Yes
116	C1qc	12932	-0.265	-0.1766	Yes
117	Pfn1	12982	-0.267	-0.1723	Yes
118	Lyn	12984	-0.267	-0.1652	Yes
119	Pdgfb	13006	-0.269	-0.1592	Yes
120	Mmp15	13049	-0.271	-0.1545	Yes
121	Prep	13319	-0.292	-0.1629	Yes
122	Sh2b3	13522	-0.307	-0.1668	Yes
123	Irf2	13557	-0.309	-0.1605	Yes
124	Stx4a	13584	-0.312	-0.1537	Yes
125	Usp14	13708	-0.323	-0.1525	Yes
126	Ctso	13716	-0.323	-0.1442	Yes
127	Calm3	13766	-0.328	-0.1383	Yes
128	Serpinb2	13815	-0.330	-0.1323	Yes
129	Ctss	13873	-0.334	-0.1268	Yes
130	Lap3	13969	-0.343	-0.1233	Yes
131	Casp7	13992	-0.345	-0.1154	Yes
132	Gngt2	14022	-0.347	-0.1078	Yes
133	Cpq	14433	-0.386	-0.1222	Yes
134	Cd36	14538	-0.395	-0.1178	Yes
135	Anxa5	14659	-0.411	-0.1140	Yes
136	Rhog	14796	-0.425	-0.1108	Yes
137	Kcnip3	15140	-0.461	-0.1191	Yes
138	Pclo	15320	-0.482	-0.1169	Yes
139	Gnb4	15424	-0.496	-0.1098	Yes
140	Dock4	15548	-0.513	-0.1034	Yes
141	Apoc1	15872	-0.580	-0.1073	Yes
142	F8	15911	-0.590	-0.0937	Yes
143	Gata3	15944	-0.600	-0.0795	Yes
144	Atox1	15986	-0.611	-0.0656	Yes
145	Maff	16247	-0.689	-0.0627	Yes
146	Plscr1	16418	-0.758	-0.0526	Yes
147	Ang	16427	-0.764	-0.0325	Yes
148	Car2	16490	-0.810	-0.0145	Yes
149	Hnf4a	16638	-1.005	0.0037	Yes