Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group3.Basophil_Pheno.cls #Group1_versus_Group3_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.2151333
Normalized Enrichment Score (NES)	-0.96880543
Nominal p-value	0.5234375
FDR q-value	1.0
FWER p-Value	0.997

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gsn	116	0.751	0.0146	No
2	Rhob	235	0.651	0.0262	No
3	Bmf	268	0.633	0.0426	No
4	Btg3	500	0.546	0.0443	No
5	Madd	514	0.542	0.0592	No
6	Hgf	568	0.526	0.0711	No
7	Nedd9	583	0.522	0.0853	No
8	Dnajc3	777	0.475	0.0873	No
9	Jun	933	0.451	0.0910	No
10	Il18	1280	0.402	0.0816	No
11	Cd38	1323	0.396	0.0905	No
12	Cd69	1388	0.388	0.0978	No
13	Brca1	1436	0.384	0.1060	No
14	Cdk2	1457	0.381	0.1158	No
15	Txnip	1607	0.366	0.1174	No
16	Rara	1687	0.357	0.1229	No
17	Gsr	1900	0.337	0.1198	No
18	Cyld	1981	0.330	0.1245	No
19	Pea15a	2061	0.324	0.1290	No
20	Timp2	2069	0.324	0.1379	No
21	Isg20	2108	0.320	0.1448	No
22	Ppp2r5b	2117	0.319	0.1535	No
23	Ctnnb1	2284	0.306	0.1523	No
24	Bcap31	2434	0.294	0.1518	No
25	Fdxr	2461	0.292	0.1586	No
26	Sptan1	2579	0.284	0.1597	No
27	Slc20a1	2939	0.255	0.1454	No
28	Sat1	2941	0.255	0.1527	No
29	Satb1	2953	0.254	0.1593	No
30	Plcb2	2966	0.253	0.1659	No
31	Mcl1	2967	0.253	0.1732	No
32	Btg2	2976	0.253	0.1800	No
33	Bcl2l2	2978	0.253	0.1872	No
34	Cav1	3116	0.242	0.1859	No
35	Bcl10	3187	0.238	0.1885	No
36	Cdc25b	3234	0.234	0.1925	No
37	Cflar	3291	0.231	0.1958	No
38	Etf1	3466	0.219	0.1916	No
39	Top2a	3899	0.194	0.1711	No
40	Bik	3904	0.193	0.1764	No
41	Wee1	3991	0.188	0.1766	No
42	Casp1	3998	0.188	0.1817	No
43	Ptk2	4065	0.184	0.1830	No
44	Rhot2	4092	0.182	0.1867	No
45	Dnaja1	4267	0.173	0.1812	No
46	Ppp3r1	4373	0.166	0.1796	No
47	Retsat	4558	0.156	0.1730	No
48	Ebp	4847	0.141	0.1597	No
49	Psen1	5072	0.128	0.1498	No
50	Casp3	5175	0.123	0.1472	No
51	Xiap	5252	0.118	0.1460	No
52	Casp6	5427	0.112	0.1387	No
53	Cdkn1a	5671	0.099	0.1269	No
54	Aifm3	5838	0.091	0.1195	No
55	Dnm1l	5880	0.089	0.1196	No
56	Tspo	5938	0.087	0.1187	No
57	Anxa1	5998	0.083	0.1175	No
58	Add1	6022	0.082	0.1185	No
59	Dpyd	6046	0.081	0.1194	No
60	Pdcd4	6345	0.066	0.1033	No
61	Crebbp	6483	0.058	0.0967	No
62	Il6	6691	0.048	0.0856	No
63	Ier3	6875	0.039	0.0757	No
64	Fas	6893	0.038	0.0758	No
65	App	7321	0.017	0.0505	No
66	Erbb3	7442	0.011	0.0436	No
67	Dffa	7593	0.005	0.0347	No
68	Psen2	7893	-0.006	0.0168	No
69	Cdkn1b	7942	-0.008	0.0141	No
70	Hmgb2	7967	-0.009	0.0129	No
71	Rock1	7973	-0.009	0.0129	No
72	Tgfbr3	7976	-0.010	0.0130	No
73	Vdac2	7994	-0.011	0.0123	No
74	Ppt1	8029	-0.012	0.0106	No
75	Igf2r	8198	-0.020	0.0011	No
76	Krt18	8199	-0.020	0.0017	No
77	H1f0	8350	-0.028	-0.0066	No
78	Irf1	8428	-0.031	-0.0103	No
79	Gch1	8532	-0.036	-0.0155	No
80	Tnfrsf12a	8533	-0.036	-0.0145	No
81	Bid	8548	-0.037	-0.0143	No
82	Lgals3	8749	-0.046	-0.0250	No
83	Ifitm3	8939	-0.055	-0.0349	No
84	Tap1	9292	-0.073	-0.0540	No
85	Rela	9358	-0.076	-0.0557	No
86	Rnasel	9389	-0.078	-0.0553	No
87	Birc3	9965	-0.106	-0.0870	No
88	Bcl2l1	10149	-0.116	-0.0947	No
89	Dap	10151	-0.116	-0.0914	No
90	Mmp2	10399	-0.128	-0.1026	No
91	Pmaip1	10482	-0.131	-0.1038	No
92	Sod2	10706	-0.143	-0.1131	No
93	Gpx4	10821	-0.150	-0.1157	No
94	Pdgfrb	11030	-0.162	-0.1236	No
95	Bcl2l11	11238	-0.172	-0.1311	No
96	Cth	11563	-0.190	-0.1452	No
97	Casp4	11617	-0.193	-0.1429	No
98	Casp8	11908	-0.208	-0.1544	No
99	Casp9	12301	-0.231	-0.1714	No
100	Tnfsf10	12505	-0.241	-0.1767	No
101	Gadd45b	13143	-0.278	-0.2071	Yes
102	Gpx3	13146	-0.279	-0.1992	Yes
103	Dap3	13296	-0.290	-0.1999	Yes
104	Hmox1	13340	-0.293	-0.1940	Yes
105	Pak1	13348	-0.294	-0.1860	Yes
106	Smad7	13350	-0.294	-0.1776	Yes
107	Ifngr1	13419	-0.300	-0.1730	Yes
108	Bnip3l	13445	-0.301	-0.1659	Yes
109	Sqstm1	13689	-0.321	-0.1713	Yes
110	Gna15	13719	-0.324	-0.1637	Yes
111	Lef1	13790	-0.329	-0.1585	Yes
112	Nefh	13797	-0.329	-0.1494	Yes
113	Casp7	13992	-0.345	-0.1512	Yes
114	Gucy2e	14072	-0.351	-0.1458	Yes
115	Mgmt	14129	-0.356	-0.1389	Yes
116	Cd44	14387	-0.382	-0.1435	Yes
117	Casp2	14654	-0.410	-0.1477	Yes
118	Diablo	14821	-0.428	-0.1454	Yes
119	Ddit3	15239	-0.472	-0.1570	Yes
120	Tnf	15307	-0.481	-0.1472	Yes
121	Ccnd2	15493	-0.506	-0.1438	Yes
122	Bgn	15511	-0.508	-0.1302	Yes
123	Tgfb2	15580	-0.521	-0.1193	Yes
124	Lmna	15621	-0.528	-0.1065	Yes
125	Gpx1	15644	-0.532	-0.0925	Yes
126	Sc5d	15646	-0.532	-0.0773	Yes
127	Ccnd1	15695	-0.543	-0.0645	Yes
128	Ank	15723	-0.548	-0.0504	Yes
129	Gadd45a	16193	-0.669	-0.0594	Yes
130	F2r	16232	-0.682	-0.0421	Yes
131	Sod1	16408	-0.752	-0.0310	Yes
132	Bax	16524	-0.835	-0.0139	Yes
133	Timp3	16538	-0.847	0.0097	Yes