Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.17716192
Normalized Enrichment Score (NES)	0.78695035
Nominal p-value	0.92741936
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Lpin1	191	0.654	0.0121	Yes
2	Smtn	395	0.561	0.0201	Yes
3	Tnnt1	821	0.461	0.0111	Yes
4	Itgb4	1016	0.427	0.0148	Yes
5	Gsn	1081	0.418	0.0260	Yes
6	Ptp4a3	1165	0.408	0.0357	Yes
7	Notch1	1209	0.400	0.0476	Yes
8	Tsc2	1228	0.398	0.0609	Yes
9	Pde4dip	1366	0.385	0.0665	Yes
10	Mylpf	1485	0.370	0.0727	Yes
11	Reep1	1511	0.367	0.0845	Yes
12	Sh2b1	1527	0.365	0.0968	Yes
13	Ppfia4	1591	0.358	0.1059	Yes
14	Mapk12	1790	0.341	0.1063	Yes
15	Kcnh1	2190	0.307	0.0933	Yes
16	Klf5	2219	0.305	0.1026	Yes
17	Mef2d	2268	0.301	0.1106	Yes
18	Sorbs1	2363	0.294	0.1155	Yes
19	Nos1	2502	0.285	0.1175	Yes
20	Kcnh2	2503	0.285	0.1278	Yes
21	Gaa	2608	0.278	0.1316	Yes
22	Ncam1	2758	0.269	0.1323	Yes
23	Dmpk	2775	0.268	0.1410	Yes
24	Mef2a	2823	0.263	0.1477	Yes
25	Myh11	2949	0.256	0.1494	Yes
26	Hdac5	3325	0.234	0.1352	Yes
27	Rb1	3372	0.232	0.1408	Yes
28	Gabarapl2	3474	0.225	0.1428	Yes
29	Akt2	3549	0.220	0.1463	Yes
30	Myl6b	3644	0.214	0.1483	Yes
31	Myom1	3652	0.213	0.1556	Yes
32	Schip1	3660	0.213	0.1629	Yes
33	Sphk1	4035	0.192	0.1473	Yes
34	Tead4	4076	0.190	0.1517	Yes
35	Crat	4105	0.188	0.1568	Yes
36	Adcy9	4167	0.185	0.1598	Yes
37	Slc6a8	4174	0.184	0.1661	Yes
38	Agrn	4186	0.184	0.1720	Yes
39	Lama2	4211	0.183	0.1772	Yes
40	Ifrd1	4649	0.159	0.1565	No
41	Atp2a1	4964	0.142	0.1427	No
42	Flii	5212	0.131	0.1326	No
43	Igfbp7	5417	0.122	0.1246	No
44	Ryr1	5506	0.117	0.1236	No
45	Cryab	5562	0.115	0.1244	No
46	Myo1c	5723	0.108	0.1186	No
47	Fdps	5729	0.107	0.1222	No
48	Wwtr1	5734	0.107	0.1258	No
49	Chrnb1	5740	0.107	0.1294	No
50	Lsp1	5741	0.107	0.1332	No
51	Tgfb1	5951	0.098	0.1241	No
52	Dmd	5989	0.096	0.1254	No
53	Cdh13	6734	0.064	0.0828	No
54	Nav2	6881	0.057	0.0761	No
55	Mapre3	7011	0.051	0.0701	No
56	Myh9	7088	0.047	0.0672	No
57	Sptan1	7127	0.045	0.0666	No
58	Pick1	7146	0.045	0.0671	No
59	Gpx3	7149	0.045	0.0686	No
60	Adam12	7150	0.045	0.0702	No
61	Svil	7759	0.019	0.0342	No
62	Fgf2	7841	0.016	0.0299	No
63	Acsl1	8212	0.001	0.0076	No
64	Col1a1	8229	0.000	0.0067	No
65	Tnnc1	8251	0.000	0.0054	No
66	Large1	8329	-0.002	0.0008	No
67	Erbb3	8616	-0.015	-0.0159	No
68	Ocel1	8681	-0.018	-0.0191	No
69	Cdkn1a	8707	-0.018	-0.0200	No
70	Rit1	8972	-0.029	-0.0348	No
71	Fkbp1b	9380	-0.048	-0.0576	No
72	Agl	9972	-0.077	-0.0905	No
73	Mybpc3	10019	-0.079	-0.0904	No
74	Pkia	10040	-0.080	-0.0888	No
75	Fhl1	10216	-0.088	-0.0962	No
76	Itgb1	10626	-0.107	-0.1170	No
77	Ache	10983	-0.123	-0.1340	No
78	Sgcd	11102	-0.129	-0.1365	No
79	Pdlim7	11214	-0.135	-0.1383	No
80	Ak1	11655	-0.158	-0.1591	No
81	Eif4a2	11665	-0.158	-0.1540	No
82	Col4a2	11871	-0.168	-0.1602	No
83	Tpm3	11914	-0.169	-0.1567	No
84	Mylk	12101	-0.181	-0.1614	No
85	Hbegf	12155	-0.183	-0.1579	No
86	App	12230	-0.187	-0.1557	No
87	Cnn3	12580	-0.206	-0.1693	No
88	Igf1	12596	-0.206	-0.1627	No
89	Gadd45b	12646	-0.209	-0.1582	No
90	Tpm2	12943	-0.229	-0.1677	No
91	Bhlhe40	12954	-0.230	-0.1600	No
92	Tpd52l1	12993	-0.232	-0.1540	No
93	Camk2b	13354	-0.256	-0.1664	No
94	Ablim1	13365	-0.257	-0.1578	No
95	Itgb5	13388	-0.259	-0.1497	No
96	Syngr2	13677	-0.279	-0.1570	No
97	Eno3	13691	-0.280	-0.1477	No
98	Bin1	13703	-0.281	-0.1383	No
99	Prnp	13749	-0.284	-0.1307	No
100	Foxo4	13817	-0.290	-0.1243	No
101	Myl4	13822	-0.290	-0.1141	No
102	Ctf1	13906	-0.296	-0.1084	No
103	Plxnb2	13951	-0.300	-0.1002	No
104	Psen2	13998	-0.303	-0.0921	No
105	Dapk2	14116	-0.312	-0.0879	No
106	Pygm	14375	-0.332	-0.0914	No
107	Sirt2	14496	-0.342	-0.0864	No
108	Atp6ap1	14501	-0.342	-0.0743	No
109	Pfkm	14944	-0.383	-0.0871	No
110	Mef2c	14998	-0.390	-0.0762	No
111	Csrp3	15121	-0.402	-0.0691	No
112	Kifc3	15266	-0.417	-0.0627	No
113	Nqo1	15270	-0.418	-0.0478	No
114	Mras	15576	-0.463	-0.0495	No
115	Actn2	15647	-0.473	-0.0367	No
116	Actn3	15806	-0.497	-0.0282	No
117	Sorbs3	15841	-0.504	-0.0121	No
118	Bag1	15960	-0.527	-0.0002	No
119	Cd36	16146	-0.570	0.0092	No
120	Pcx	16419	-0.668	0.0169	No