Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_HYPOXIA
Enrichment Score (ES)	-0.267107
Normalized Enrichment Score (NES)	-1.0824685
Nominal p-value	0.3185654
FDR q-value	0.7282446
FWER p-Value	0.994

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gpc1	206	0.647	0.0073	No
2	Pgm1	341	0.575	0.0167	No
3	Btg1	596	0.504	0.0167	No
4	Ids	730	0.474	0.0231	No
5	Xpnpep1	761	0.469	0.0356	No
6	Pgk1	1106	0.415	0.0274	No
7	Vhl	1411	0.380	0.0207	No
8	Fosl2	1486	0.370	0.0275	No
9	Anxa2	1571	0.360	0.0334	No
10	Ppfia4	1591	0.358	0.0431	No
11	Ilvbl	1780	0.342	0.0422	No
12	Slc2a1	1920	0.329	0.0438	No
13	Bcl2	2127	0.312	0.0409	No
14	Cp	2266	0.301	0.0417	No
15	Jun	2539	0.283	0.0339	No
16	Hs3st1	2565	0.281	0.0410	No
17	Gaa	2608	0.278	0.0469	No
18	Ak4	2631	0.277	0.0540	No
19	Akap12	2671	0.274	0.0600	No
20	Dusp1	2719	0.271	0.0654	No
21	Vldlr	2782	0.267	0.0698	No
22	Ets1	2928	0.257	0.0688	No
23	Pfkp	3239	0.239	0.0574	No
24	Nedd4l	3264	0.237	0.0632	No
25	Gapdhs	3476	0.225	0.0573	No
26	Tpi1	3514	0.222	0.0618	No
27	Scarb1	3600	0.217	0.0633	No
28	B3galt6	3726	0.209	0.0621	No
29	Aldoc	3856	0.202	0.0605	No
30	Noct	4672	0.157	0.0160	No
31	Ext1	4756	0.153	0.0157	No
32	Siah2	4765	0.152	0.0198	No
33	Pnrc1	4905	0.145	0.0158	No
34	Cxcr4	5086	0.137	0.0091	No
35	Hspa5	5243	0.129	0.0036	No
36	Ier3	5258	0.129	0.0067	No
37	Slc37a4	5360	0.124	0.0044	No
38	Hk2	5522	0.116	-0.0018	No
39	Fbp1	5579	0.115	-0.0017	No
40	Pfkl	5737	0.107	-0.0079	No
41	Ero1a	6003	0.095	-0.0210	No
42	Gbe1	6111	0.090	-0.0248	No
43	Pklr	6311	0.081	-0.0343	No
44	Prdx5	6408	0.077	-0.0377	No
45	Pfkfb3	6525	0.073	-0.0425	No
46	Wsb1	6720	0.064	-0.0523	No
47	Sult2b1	6789	0.061	-0.0545	No
48	Cdkn1c	6810	0.060	-0.0539	No
49	Ppp1r15a	6878	0.057	-0.0562	No
50	Ccng2	6933	0.055	-0.0578	No
51	Prkca	7033	0.049	-0.0623	No
52	Myh9	7088	0.047	-0.0641	No
53	Hdlbp	7481	0.031	-0.0868	No
54	Tgm2	7551	0.028	-0.0901	No
55	Zfp292	7646	0.024	-0.0951	No
56	Tpst2	7707	0.022	-0.0980	No
57	Pdk3	7930	0.012	-0.1111	No
58	Tiparp	8079	0.006	-0.1198	No
59	Fam162a	8102	0.005	-0.1210	No
60	Cavin3	8266	-0.000	-0.1309	No
61	Large1	8329	-0.002	-0.1345	No
62	Pam	8630	-0.015	-0.1522	No
63	Atp7a	8675	-0.017	-0.1543	No
64	Cdkn1a	8707	-0.018	-0.1556	No
65	Foxo3	8710	-0.019	-0.1552	No
66	Klf6	8776	-0.021	-0.1585	No
67	Klf7	8831	-0.023	-0.1610	No
68	Phkg1	8953	-0.028	-0.1675	No
69	Ldha	8989	-0.030	-0.1687	No
70	Adora2b	9076	-0.034	-0.1728	No
71	Selenbp1	9110	-0.036	-0.1737	No
72	Hexa	9145	-0.038	-0.1746	No
73	Gpi1	9344	-0.047	-0.1852	No
74	Ndst1	9561	-0.057	-0.1965	No
75	Fos	9713	-0.064	-0.2037	No
76	Vegfa	9725	-0.064	-0.2024	No
77	Aldoa	9855	-0.071	-0.2080	No
78	Eno1b	9860	-0.071	-0.2060	No
79	Tes	9928	-0.075	-0.2078	No
80	Kdm3a	10278	-0.090	-0.2261	No
81	Glrx	10294	-0.091	-0.2243	No
82	Klhl24	10393	-0.096	-0.2273	No
83	Ddit4	10447	-0.099	-0.2274	No
84	Galk1	10694	-0.110	-0.2389	No
85	Tnfaip3	10792	-0.116	-0.2413	No
86	Maff	10844	-0.117	-0.2408	No
87	B4galnt2	10939	-0.120	-0.2428	No
88	Gpc3	11143	-0.132	-0.2511	No
89	Tgfbi	11161	-0.133	-0.2480	No
90	Ankzf1	11208	-0.135	-0.2467	No
91	Isg20	11297	-0.139	-0.2478	No
92	Ampd3	11313	-0.140	-0.2444	No
93	Rbpj	11362	-0.143	-0.2430	No
94	Il6	11378	-0.144	-0.2395	No
95	Slc2a3	11422	-0.146	-0.2376	No
96	Casp6	11444	-0.147	-0.2344	No
97	Sap30	11765	-0.163	-0.2488	No
98	Grhpr	11818	-0.166	-0.2468	No
99	Nagk	11873	-0.169	-0.2450	No
100	Kif5a	11933	-0.171	-0.2433	No
101	Gys1	12050	-0.178	-0.2449	No
102	Sdc2	12225	-0.187	-0.2498	No
103	Pdk1	12332	-0.192	-0.2503	No
104	Col5a1	12543	-0.204	-0.2568	No
105	Nr3c1	12715	-0.214	-0.2606	Yes
106	Zfp36	12743	-0.216	-0.2556	Yes
107	Nfil3	12914	-0.227	-0.2590	Yes
108	Bhlhe40	12954	-0.230	-0.2543	Yes
109	Cav1	13145	-0.241	-0.2585	Yes
110	Rora	13146	-0.241	-0.2511	Yes
111	Cited2	13238	-0.248	-0.2491	Yes
112	Map3k1	13250	-0.248	-0.2422	Yes
113	Gcnt2	13297	-0.251	-0.2373	Yes
114	Plin2	13319	-0.253	-0.2309	Yes
115	Mxi1	13509	-0.268	-0.2341	Yes
116	Eno3	13691	-0.280	-0.2365	Yes
117	Csrp2	13727	-0.283	-0.2300	Yes
118	Lxn	13761	-0.285	-0.2233	Yes
119	Cdkn1b	13773	-0.286	-0.2153	Yes
120	Cavin1	13798	-0.288	-0.2080	Yes
121	Ldhc	13945	-0.299	-0.2077	Yes
122	Pgm2	14034	-0.305	-0.2037	Yes
123	P4ha1	14058	-0.308	-0.1957	Yes
124	Hk1	14285	-0.325	-0.1995	Yes
125	Pim1	14288	-0.325	-0.1897	Yes
126	Pygm	14375	-0.332	-0.1848	Yes
127	Mif	14434	-0.337	-0.1780	Yes
128	Mt1	14681	-0.356	-0.1820	Yes
129	Irs2	14697	-0.358	-0.1720	Yes
130	Plac8	14892	-0.378	-0.1722	Yes
131	Sdc3	14968	-0.387	-0.1650	Yes
132	Slc6a6	15008	-0.392	-0.1554	Yes
133	Plaur	15021	-0.393	-0.1441	Yes
134	Bgn	15059	-0.397	-0.1343	Yes
135	Ddit3	15316	-0.424	-0.1368	Yes
136	Ugp2	15531	-0.456	-0.1359	Yes
137	Slc25a1	15559	-0.459	-0.1235	Yes
138	Ndst2	15628	-0.470	-0.1133	Yes
139	Jmjd6	15678	-0.476	-0.1018	Yes
140	Bnip3l	15840	-0.504	-0.0961	Yes
141	Errfi1	15860	-0.506	-0.0819	Yes
142	Angptl4	16062	-0.552	-0.0772	Yes
143	Pdgfb	16110	-0.562	-0.0629	Yes
144	Tpd52	16158	-0.574	-0.0483	Yes
145	Ndrg1	16356	-0.640	-0.0407	Yes
146	Gpc4	16374	-0.648	-0.0219	Yes
147	Hmox1	16408	-0.661	-0.0038	Yes
148	Car12	16471	-0.699	0.0138	Yes