DatasetBasophil.Basophil_Pheno.cls
#Group1_versus_Group2.Basophil_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeBasophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class0
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.3377115
Normalized Enrichment Score (NES)1.3055083
Nominal p-value0.21485944
FDR q-value0.39313623
FWER p-Value0.839
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ddx39a2820.601-0.0024Yes
2Bub13140.5840.0101Yes
3Cdc453430.5750.0225Yes
4Chaf1a3930.5610.0333Yes
5Marcks4080.5550.0461Yes
6Pole4430.5450.0574Yes
7Pbk5490.5160.0636Yes
8Incenp6340.4960.0707Yes
9Hmmr6690.4870.0806Yes
10Slc7a57130.4770.0897Yes
11Pds5b7470.4710.0993Yes
12E2f27510.4710.1106Yes
13Stil7550.4700.1220Yes
14Kif228430.4570.1279Yes
15Cdc710030.4280.1288Yes
16Nsd210270.4250.1378Yes
17Kif1510430.4230.1473Yes
18Racgap111170.4130.1530Yes
19Troap12960.3910.1518Yes
20Mki6712990.3900.1612Yes
21Ccnf13100.3890.1702Yes
22H2ax14360.3770.1718Yes
23Top2a14670.3720.1792Yes
24Cdk115080.3680.1858Yes
25Rad23b16070.3570.1886Yes
26Smc216210.3560.1965Yes
27Ube2c16740.3520.2020Yes
28Cdkn2c17330.3460.2070Yes
29H2bc1217600.3440.2138Yes
30Aurka18920.3310.2140Yes
31Knl119170.3290.2206Yes
32Brca220090.3220.2230Yes
33Ndc8020200.3210.2303Yes
34Aurkb20350.3190.2373Yes
35Espl120370.3190.2450Yes
36Cenpe20720.3160.2507Yes
37Tacc320890.3150.2575Yes
38Odf221930.3070.2587Yes
39Hnrnpd22200.3050.2647Yes
40Ewsr123670.2940.2630Yes
41E2f424110.2900.2675Yes
42Ccnt124480.2880.2724Yes
43Gspt124570.2880.2790Yes
44Polq26200.2780.2760Yes
45Lmnb126290.2770.2823Yes
46Tfdp126470.2760.2880Yes
47Casp8ap227320.2700.2896Yes
48Cdc2727570.2690.2947Yes
49Gins227670.2680.3007Yes
50Suv39h127790.2670.3066Yes
51Plk128150.2640.3110Yes
52Srsf228380.2630.3161Yes
53Smc429110.2580.3181Yes
54Rps6ka530000.2530.3189Yes
55Nasp32610.2380.3090Yes
56Numa133550.2330.3091Yes
57Ccna234810.2250.3070Yes
58Chmp1a34880.2240.3122Yes
59Ttk35830.2180.3118Yes
60Cul136050.2160.3158Yes
61Dtymk36410.2140.3190Yes
62Tmpo36610.2130.3230Yes
63Rbl137410.2080.3234Yes
64Ccnd137530.2080.3278Yes
65Sqle38140.2050.3292Yes
66Kif2338210.2040.3338Yes
67Xpo139570.1970.3305Yes
68Bard140240.1930.3312Yes
69Mcm240270.1920.3358Yes
70Lig341390.1860.3336Yes
71Ezh241830.1840.3355Yes
72Prmt544860.1670.3213Yes
73Lbr45950.1610.3187Yes
74Hif1a46220.1600.3211Yes
75Nup5046230.1600.3250Yes
76Prpf4b46370.1600.3281Yes
77Mnat146860.1560.3291Yes
78Mybl247900.1510.3265Yes
79Hira47930.1510.3301Yes
80Kif20b48930.1460.3277Yes
81Myc49220.1440.3295Yes
82Prim250630.1380.3244Yes
83Smc1a50690.1380.3275Yes
84E2f151160.1350.3280Yes
85Nek252200.1300.3250Yes
86Upf152310.1300.3276Yes
87Pola252400.1290.3302Yes
88Tra2b52630.1280.3321Yes
89Kif1152750.1280.3345Yes
90Kif452920.1270.3367Yes
91Cbx153640.1240.3354Yes
92Tpx253770.1230.3377Yes
93Kif2c54390.1200.3370No
94Mad2l156620.1110.3262No
95Syncrip56900.1090.3273No
96Hmgb357020.1090.3293No
97Ctcf58520.1020.3228No
98Smarcc158750.1010.3239No
99Katna158990.1000.3249No
100Tgfb159510.0980.3242No
101Dmd59890.0960.3244No
102Nup9861160.0900.3189No
103Traip61310.0890.3203No
104Nusap162120.0860.3175No
105Smad362550.0840.3170No
106Cks262680.0830.3184No
107H2az163060.0820.3181No
108Notch263460.0800.3177No
109Kpnb163560.0790.3191No
110Cks1b63640.0790.3206No
111H2az263840.0780.3214No
112Ilf365400.0720.3138No
113Fbxo565750.0710.3135No
114Fancc66290.0690.3119No
115Cdk468160.0600.3022No
116Jpt168520.0590.3015No
117Uck268800.0570.3012No
118Tnpo269810.0520.2965No
119Ythdc170470.0490.2937No
120Birc571050.0460.2914No
121Mcm372790.0400.2819No
122Prc173110.0380.2810No
123Atf573300.0380.2808No
124Nolc174030.0350.2773No
125Abl174070.0350.2779No
126Cdc25b74080.0350.2788No
127Mcm675020.0300.2739No
128Cenpf75070.0300.2744No
129Rad2175150.0300.2747No
130Atrx75330.0290.2744No
131Stag175560.0280.2737No
132Dbf475630.0280.2741No
133Rad54l76430.0250.2699No
134Ss1879380.0120.2524No
135Ccnb279940.0100.2493No
136Slc7a180330.0080.2472No
137Hnrnpu80480.0070.2465No
138Top18513-0.0110.2187No
139Slc38a18634-0.0160.2118No
140Pml8673-0.0170.2099No
141Kmt5a8763-0.0200.2050No
142Bub38786-0.0210.2042No
143Chek18952-0.0280.1949No
144Srsf109247-0.0420.1781No
145Cdc69320-0.0450.1748No
146Stmn19517-0.0550.1643No
147G3bp19518-0.0550.1657No
148Cul59615-0.0590.1613No
149Cdkn39714-0.0640.1569No
150Pafah1b19743-0.0660.1569No
151Foxn39797-0.0680.1553No
152Rasal29857-0.0710.1535No
153Mtf210119-0.0830.1397No
154Rpa210246-0.0890.1343No
155Kif5b10262-0.0900.1356No
156Plk410382-0.0960.1307No
157Arid4a10405-0.0970.1318No
158Wrn10423-0.0980.1331No
159Sfpq10436-0.0980.1348No
160Tle310477-0.1010.1349No
161Cul4a10693-0.1100.1245No
162Snrpd110768-0.1150.1229No
163Cdc25a10872-0.1180.1195No
164Pttg111106-0.1290.1086No
165Mcm511500-0.1500.0885No
166Orc611619-0.1560.0851No
167Sap3011765-0.1630.0803No
168Dkc111808-0.1660.0819No
169Map3k2011919-0.1700.0794No
170Cul312113-0.1810.0721No
171Exo112304-0.1910.0653No
172Mapk1412405-0.1970.0641No
173Dr112450-0.1990.0663No
174E2f312544-0.2040.0656No
175Cenpa12655-0.2100.0641No
176Ncl13021-0.2330.0477No
177Slc12a213043-0.2340.0522No
178Meis113113-0.2390.0539No
179Tent4a13137-0.2410.0584No
180Orc513335-0.2540.0527No
181Hmga1b13391-0.2590.0557No
182Hspa813692-0.2800.0444No
183Cdkn1b13773-0.2860.0466No
184Hus113961-0.3000.0426No
185Srsf115252-0.415-0.0254No
186Ube2s15372-0.431-0.0220No
187Cdc2015797-0.496-0.0355No
188Odc116392-0.654-0.0555No
189Pura16441-0.680-0.0417No
190Bcl316466-0.698-0.0260No
191Egf16531-0.742-0.0117No
192Amd116639-0.8900.0036No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT