Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	-0.31234944
Normalized Enrichment Score (NES)	-1.4090157
Nominal p-value	0.034907598
FDR q-value	0.6810493
FWER p-Value	0.649

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	F10	132	0.700	0.0115	No
2	Prdm4	251	0.620	0.0215	No
3	Brpf3	380	0.565	0.0295	No
4	Gp1ba	417	0.552	0.0427	No
5	Pdp1	622	0.497	0.0441	No
6	Xpnpep1	761	0.469	0.0488	No
7	Plek	833	0.459	0.0573	No
8	Msrb1	845	0.456	0.0693	No
9	Gp9	917	0.445	0.0774	No
10	C2	1762	0.344	0.0359	No
11	Timp2	2065	0.317	0.0265	No
12	Casp1	2109	0.313	0.0326	No
13	Ctsh	2229	0.304	0.0338	No
14	Cp	2266	0.301	0.0400	No
15	Phex	2286	0.300	0.0472	No
16	Cebpb	2327	0.296	0.0530	No
17	Pik3r5	2399	0.291	0.0568	No
18	Fn1	2676	0.274	0.0477	No
19	Psmb9	2817	0.264	0.0466	No
20	Olr1	2847	0.262	0.0521	No
21	Sirt6	2942	0.256	0.0535	No
22	F7	2967	0.255	0.0592	No
23	Gzmb	3110	0.247	0.0574	No
24	Ctsd	3337	0.233	0.0503	No
25	Dgkh	3373	0.232	0.0546	No
26	Psen1	3635	0.215	0.0448	No
27	Gca	3861	0.202	0.0368	No
28	Gpd2	3872	0.201	0.0418	No
29	Gnb2	4030	0.192	0.0376	No
30	Rnf4	4216	0.182	0.0315	No
31	Kcnip2	4387	0.172	0.0260	No
32	Ppp2cb	4416	0.171	0.0291	No
33	Kif2a	4431	0.169	0.0329	No
34	Lrp1	4570	0.163	0.0291	No
35	Gnai2	4577	0.162	0.0332	No
36	Fyn	4586	0.162	0.0372	No
37	Rce1	4648	0.159	0.0380	No
38	Pik3cg	4782	0.151	0.0341	No
39	Prss36	4943	0.143	0.0284	No
40	Prkcd	5133	0.134	0.0208	No
41	Hspa5	5243	0.129	0.0178	No
42	Lta4h	5248	0.129	0.0211	No
43	Dyrk2	5394	0.123	0.0158	No
44	S100a13	5429	0.121	0.0171	No
45	Mmp8	5635	0.112	0.0078	No
46	Spock2	5704	0.109	0.0067	No
47	Usp8	5795	0.104	0.0042	No
48	Gmfb	5987	0.096	-0.0047	No
49	Was	6013	0.095	-0.0036	No
50	Ctsl	6049	0.093	-0.0031	No
51	Mmp15	6242	0.084	-0.0124	No
52	Irf1	6606	0.069	-0.0324	No
53	Casp9	6623	0.069	-0.0314	No
54	Gata3	6699	0.065	-0.0342	No
55	Cdh13	6734	0.064	-0.0345	No
56	Kcnip3	6849	0.059	-0.0397	No
57	Dock10	7129	0.045	-0.0553	No
58	Fcer1g	7246	0.041	-0.0612	No
59	Grb2	7422	0.034	-0.0708	No
60	Lamp2	7458	0.032	-0.0720	No
61	Hspa1a	7501	0.030	-0.0737	No
62	Akap10	7983	0.010	-0.1025	No
63	Rabif	8001	0.009	-0.1033	No
64	Ppp4c	8087	0.005	-0.1083	No
65	Apoc1	8240	0.000	-0.1174	No
66	S100a9	8244	0.000	-0.1176	No
67	Csrp1	8316	-0.002	-0.1219	No
68	Rbsn	8323	-0.002	-0.1222	No
69	Sh2b3	8366	-0.004	-0.1246	No
70	Cpm	8459	-0.009	-0.1299	No
71	Dgkg	8623	-0.015	-0.1393	No
72	Mmp14	8678	-0.017	-0.1421	No
73	Pfn1	9207	-0.040	-0.1729	No
74	Plg	9398	-0.049	-0.1830	No
75	Usp16	9472	-0.052	-0.1860	No
76	Gnai3	9592	-0.059	-0.1915	No
77	Usp15	9862	-0.072	-0.2058	No
78	Jak2	10042	-0.080	-0.2144	No
79	Casp7	10259	-0.090	-0.2250	No
80	C1qa	10308	-0.092	-0.2253	No
81	Zeb1	10340	-0.093	-0.2246	No
82	Dusp5	10345	-0.094	-0.2222	No
83	Lipa	10358	-0.094	-0.2203	No
84	Ehd1	10458	-0.100	-0.2235	No
85	Pla2g4a	10495	-0.101	-0.2229	No
86	Calm1	10673	-0.109	-0.2306	No
87	Tnfaip3	10792	-0.116	-0.2345	No
88	Maff	10844	-0.117	-0.2343	No
89	Casp3	10914	-0.119	-0.2352	No
90	Usp14	11142	-0.132	-0.2452	No
91	Raf1	11151	-0.133	-0.2420	No
92	Dusp6	11212	-0.135	-0.2419	No
93	Il6	11378	-0.144	-0.2479	No
94	Cr2	11425	-0.146	-0.2466	No
95	Lyn	11455	-0.148	-0.2442	No
96	Irf2	11832	-0.167	-0.2623	No
97	Col4a2	11871	-0.168	-0.2599	No
98	Adam9	11915	-0.169	-0.2578	No
99	Cd46	11989	-0.174	-0.2574	No
100	Prcp	12043	-0.177	-0.2557	No
101	Cdk5r1	12228	-0.187	-0.2616	No
102	Src	12259	-0.189	-0.2582	No
103	Rhog	12318	-0.192	-0.2563	No
104	Pik3ca	12338	-0.193	-0.2521	No
105	Cblb	12474	-0.200	-0.2547	No
106	Prep	13114	-0.239	-0.2867	No
107	Irf7	13231	-0.247	-0.2869	No
108	F5	13654	-0.278	-0.3046	Yes
109	Itgam	13746	-0.284	-0.3022	Yes
110	Gng2	13764	-0.285	-0.2953	Yes
111	Lgals3	13830	-0.291	-0.2912	Yes
112	Vcpip1	13898	-0.296	-0.2870	Yes
113	Gnb4	13920	-0.297	-0.2800	Yes
114	C3	13946	-0.299	-0.2732	Yes
115	Lcp2	13989	-0.302	-0.2674	Yes
116	Ctsb	14003	-0.303	-0.2597	Yes
117	Pim1	14288	-0.325	-0.2678	Yes
118	Fdx1	14312	-0.327	-0.2602	Yes
119	Pclo	14395	-0.333	-0.2559	Yes
120	Serpinb2	14487	-0.341	-0.2519	Yes
121	Serpinc1	14506	-0.342	-0.2435	Yes
122	Casp4	14557	-0.347	-0.2368	Yes
123	Calm3	14558	-0.347	-0.2272	Yes
124	Ctsc	14571	-0.348	-0.2182	Yes
125	Lck	14632	-0.353	-0.2121	Yes
126	Ctss	14791	-0.368	-0.2114	Yes
127	Plscr1	14900	-0.379	-0.2074	Yes
128	Plaur	15021	-0.393	-0.2037	Yes
129	Dock4	15034	-0.395	-0.1935	Yes
130	Ang	15221	-0.412	-0.1933	Yes
131	Anxa5	15242	-0.414	-0.1830	Yes
132	Dock9	15329	-0.426	-0.1763	Yes
133	Ctso	15341	-0.429	-0.1651	Yes
134	C1qc	15443	-0.440	-0.1590	Yes
135	Actn2	15647	-0.473	-0.1581	Yes
136	Hnf4a	15704	-0.479	-0.1482	Yes
137	Cpq	15818	-0.500	-0.1411	Yes
138	Cfb	15844	-0.504	-0.1286	Yes
139	L3mbtl4	15849	-0.504	-0.1149	Yes
140	Gngt2	15851	-0.505	-0.1009	Yes
141	Stx4a	15878	-0.511	-0.0883	Yes
142	Dpp4	15963	-0.527	-0.0787	Yes
143	Lgmn	16036	-0.547	-0.0679	Yes
144	Pdgfb	16110	-0.562	-0.0567	Yes
145	Cd36	16146	-0.570	-0.0430	Yes
146	Lap3	16151	-0.571	-0.0273	Yes
147	Atox1	16279	-0.616	-0.0179	Yes
148	Car2	16381	-0.650	-0.0060	Yes
149	F8	16648	-0.904	0.0031	Yes