Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	Basophil.Basophil_Pheno.cls #Group1_versus_Group2.Basophil_Pheno.cls #Group1_versus_Group2_repos
Phenotype	Basophil_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	-0.25918162
Normalized Enrichment Score (NES)	-1.1814058
Nominal p-value	0.18309858
FDR q-value	0.68920237
FWER p-Value	0.957

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bcl2l2	530	0.522	-0.0149	No
2	Rara	790	0.465	-0.0153	No
3	Brca1	932	0.442	-0.0093	No
4	Ppp2r5b	1055	0.422	-0.0029	No
5	Gsn	1081	0.418	0.0093	No
6	Bcl2l1	1251	0.396	0.0121	No
7	Bid	1351	0.387	0.0188	No
8	Top2a	1467	0.372	0.0241	No
9	Cdk2	1504	0.368	0.0340	No
10	Cd44	1984	0.324	0.0157	No
11	Madd	2062	0.318	0.0214	No
12	Timp2	2065	0.317	0.0317	No
13	Bcl10	2090	0.314	0.0406	No
14	Casp1	2109	0.313	0.0497	No
15	Gch1	2312	0.297	0.0473	No
16	Ebp	2354	0.295	0.0545	No
17	Ctnnb1	2365	0.294	0.0635	No
18	Rhot2	2442	0.289	0.0684	No
19	Ppt1	2451	0.288	0.0773	No
20	Jun	2539	0.283	0.0813	No
21	Fdxr	2560	0.281	0.0894	No
22	Sat1	2561	0.281	0.0986	No
23	Krt18	2934	0.256	0.0845	No
24	Slc20a1	3548	0.220	0.0547	No
25	Bcap31	3634	0.215	0.0566	No
26	Psen1	3635	0.215	0.0637	No
27	Ccnd1	3753	0.208	0.0634	No
28	Rela	3801	0.206	0.0673	No
29	Xiap	4241	0.181	0.0467	No
30	Dap	4392	0.172	0.0433	No
31	Cyld	4544	0.164	0.0396	No
32	Plcb2	4560	0.163	0.0440	No
33	Tspo	4714	0.155	0.0399	No
34	Btg3	4780	0.151	0.0409	No
35	Dnm1l	4911	0.145	0.0378	No
36	Nedd9	5177	0.132	0.0261	No
37	Ier3	5258	0.129	0.0255	No
38	Hmgb2	5474	0.118	0.0164	No
39	Vdac2	5622	0.113	0.0112	No
40	Diablo	5671	0.110	0.0120	No
41	Pdgfrb	6009	0.095	-0.0053	No
42	Satb1	6196	0.087	-0.0136	No
43	Tgfb2	6221	0.085	-0.0123	No
44	Cflar	6451	0.076	-0.0236	No
45	Wee1	6473	0.075	-0.0224	No
46	Irf1	6606	0.069	-0.0281	No
47	Casp9	6623	0.069	-0.0268	No
48	Il18	6882	0.057	-0.0405	No
49	Bik	6917	0.055	-0.0408	No
50	Txnip	7114	0.046	-0.0511	No
51	Sptan1	7127	0.045	-0.0504	No
52	Gpx3	7149	0.045	-0.0502	No
53	Cdc25b	7408	0.035	-0.0646	No
54	Pea15a	7579	0.027	-0.0740	No
55	Gsr	7616	0.026	-0.0753	No
56	Dnaja1	7731	0.020	-0.0815	No
57	Ppp3r1	7796	0.018	-0.0848	No
58	Casp8	7797	0.018	-0.0842	No
59	Crebbp	8066	0.007	-0.1001	No
60	Dap3	8558	-0.012	-0.1294	No
61	Erbb3	8616	-0.015	-0.1323	No
62	Dnajc3	8662	-0.017	-0.1345	No
63	Etf1	8677	-0.017	-0.1348	No
64	Cdkn1a	8707	-0.018	-0.1359	No
65	Bcl2l11	8738	-0.020	-0.1371	No
66	Cd38	8783	-0.021	-0.1391	No
67	Hgf	8880	-0.026	-0.1440	No
68	Anxa1	9175	-0.039	-0.1605	No
69	Retsat	9370	-0.048	-0.1706	No
70	Pdcd4	9451	-0.051	-0.1738	No
71	Rock1	9504	-0.054	-0.1752	No
72	Mgmt	9681	-0.062	-0.1837	No
73	Ptk2	10191	-0.087	-0.2116	No
74	Casp7	10259	-0.090	-0.2127	No
75	F2r	10314	-0.092	-0.2130	No
76	Birc3	10625	-0.107	-0.2282	No
77	Tap1	10667	-0.109	-0.2271	No
78	Add1	10775	-0.115	-0.2297	No
79	Casp3	10914	-0.119	-0.2342	No
80	H1f0	11078	-0.128	-0.2398	No
81	Rhob	11163	-0.133	-0.2405	No
82	Isg20	11297	-0.139	-0.2440	No
83	Btg2	11348	-0.142	-0.2424	No
84	Il6	11378	-0.144	-0.2394	No
85	Casp6	11444	-0.147	-0.2385	No
86	Tnfrsf12a	11599	-0.155	-0.2427	No
87	Igf2r	11668	-0.158	-0.2417	No
88	Ifngr1	11776	-0.164	-0.2428	No
89	Sod2	12049	-0.177	-0.2534	Yes
90	Ifitm3	12063	-0.178	-0.2483	Yes
91	Tnfsf10	12164	-0.183	-0.2483	Yes
92	Bax	12180	-0.185	-0.2432	Yes
93	App	12230	-0.187	-0.2400	Yes
94	Dffa	12329	-0.192	-0.2396	Yes
95	Mmp2	12358	-0.194	-0.2350	Yes
96	Bmf	12583	-0.206	-0.2417	Yes
97	Sqstm1	12600	-0.206	-0.2359	Yes
98	Gadd45b	12646	-0.209	-0.2318	Yes
99	Cth	12975	-0.231	-0.2440	Yes
100	Tnf	13001	-0.232	-0.2379	Yes
101	Gpx4	13026	-0.233	-0.2317	Yes
102	Cav1	13145	-0.241	-0.2310	Yes
103	Sod1	13481	-0.266	-0.2425	Yes
104	Casp2	13625	-0.277	-0.2420	Yes
105	Rnasel	13664	-0.278	-0.2352	Yes
106	Pak1	13673	-0.279	-0.2265	Yes
107	Cdkn1b	13773	-0.286	-0.2232	Yes
108	Lgals3	13830	-0.291	-0.2170	Yes
109	Mcl1	13960	-0.300	-0.2150	Yes
110	Psen2	13998	-0.303	-0.2073	Yes
111	Ank	14029	-0.305	-0.1991	Yes
112	Lmna	14243	-0.323	-0.2014	Yes
113	Ccnd2	14409	-0.335	-0.2004	Yes
114	Aifm3	14522	-0.344	-0.1958	Yes
115	Casp4	14557	-0.347	-0.1865	Yes
116	Nefh	14559	-0.347	-0.1752	Yes
117	Timp3	14759	-0.364	-0.1753	Yes
118	Dpyd	14845	-0.373	-0.1682	Yes
119	Pmaip1	14855	-0.374	-0.1565	Yes
120	Bgn	15059	-0.397	-0.1557	Yes
121	Ddit3	15316	-0.424	-0.1573	Yes
122	Gna15	15426	-0.437	-0.1495	Yes
123	Tgfbr3	15580	-0.463	-0.1436	Yes
124	Smad7	15680	-0.476	-0.1340	Yes
125	Lef1	15837	-0.503	-0.1269	Yes
126	Bnip3l	15840	-0.504	-0.1105	Yes
127	Fas	16063	-0.553	-0.1058	Yes
128	Sc5d	16069	-0.554	-0.0879	Yes
129	Cd69	16375	-0.648	-0.0851	Yes
130	Hmox1	16408	-0.661	-0.0654	Yes
131	Gucy2e	16576	-0.783	-0.0498	Yes
132	Gpx1	16606	-0.827	-0.0244	Yes
133	Gadd45a	16655	-0.915	0.0027	Yes