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"GAGGG":923424, "GTAAA":485070, "GTAAT":415217, "GTAAC":288703, "GTAAG":330598, "GTATA":275270, "GTATT":434543, "GTATC":256142, "GTATG":280585, "GTACA":417293, "GTACT":361282, "GTACC":237229, "GTACG":94208, "GTAGA":428634, "GTAGT":409593, "GTAGC":382562, "GTAGG":446778, "GTTAA":359938, "GTTAT":329699, "GTTAC":256053, "GTTAG":262543, "GTTTA":429987, "GTTTT":933128, "GTTTC":758986, "GTTTG":561250, "GTTCA":703921, "GTTCT":808318, "GTTCC":535833, "GTTCG":139157, "GTTGA":468575, "GTTGT":496269, "GTTGC":455384, "GTTGG":572808, "GTCAA":445036, "GTCAT":516455, "GTCAC":623364, "GTCAG":640223, "GTCTA":266114, "GTCTT":746965, "GTCTC":711327, "GTCTG":693451, "GTCCA":646447, "GTCCT":644762, "GTCCC":690048, "GTCCG":185598, "GTCGA":125187, "GTCGT":171277, "GTCGC":161832, "GTCGG":241618, "GTGAA":561165, "GTGAT":502150, "GTGAC":412312, "GTGAG":612582, "GTGTA":359540, "GTGTT":478673, "GTGTC":452575, "GTGTG":606809, "GTGCA":615391, "GTGCT":544661, "GTGCC":486203, "GTGCG":190350, "GTGGA":594176, "GTGGT":828028, "GTGGC":877545, "GTGGG":785787, "GCAAA":590341, "GCAAT":422393, "GCAAC":501632, "GCAAG":459368, "GCATA":307340, "GCATT":474085, "GCATC":505003, "GCATG":487786, "GCACA":612571, "GCACT":531169, "GCACC":487091, "GCACG":401222, "GCAGA":727776, "GCAGT":718460, "GCAGC":824509, "GCAGG":988915, "GCTAA":321781, "GCTAT":490772, "GCTAC":315259, "GCTAG":251540, "GCTTA":292305, "GCTTT":699410, "GCTTC":759553, "GCTTG":688579, "GCTCA":727616, "GCTCT":681141, "GCTCC":945517, "GCTCG":232331, "GCTGA":714278, "GCTGT":684640, "GCTGC":766540, "GCTGG":1257787, "GCCAA":566198, "GCCAT":560478, "GCCAC":730098, "GCCAG":933646, "GCCTA":246028, "GCCTT":656322, "GCCTC":874185, "GCCTG":857691, "GCCCA":747713, "GCCCT":577088, "GCCCC":671060, "GCCCG":359837, "GCCGA":303138, "GCCGT":217053, "GCCGC":346013, "GCCGG":579226, "GCGAA":111546, "GCGAT":330436, "GCGAC":147942, "GCGAG":274211, "GCGTA":96583, "GCGTT":166131, "GCGTC":189349, "GCGTG":227239, "GCGCA":212098, "GCGCT":216453, "GCGCC":319262, "GCGCG":482352, "GCGGA":288898, "GCGGT":228658, "GCGGC":444739, "GCGGG":544659, "GGAAA":823771, "GGAAT":529713, "GGAAC":460050, "GGAAG":1027008, "GGATA":334244, "GGATT":479359, "GGATC":434751, "GGATG":689240, "GGACA":588105, "GGACT":453141, "GGACC":431165, "GGACG":260247, "GGAGA":897592, "GGAGT":853336, "GGAGC":635390, "GGAGG":1414570, "GGTAA":373042, "GGTAT":318556, "GGTAC":334093, "GGTAG":449551, "GGTTA":299919, "GGTTT":634185, "GGTTC":610985, "GGTTG":506709, "GGTCA":702202, "GGTCT":670824, "GGTCC":698434, "GGTCG":223783, "GGTGA":682254, "GGTGT":555836, "GGTGC":511182, "GGTGG":1191948, "GGCAA":718560, "GGCAT":620187, "GGCAC":603501, "GGCAG":1125182, "GGCTA":481928, "GGCTT":661805, "GGCTC":705561, "GGCTG":1258479, "GGCCA":837008, "GGCCT":744954, "GGCCC":714221, "GGCCG":556001, "GGCGA":270394, "GGCGT":258399, "GGCGC":570772, "GGCGG":683077, "GGGAA":833534, "GGGAT":548039, "GGGAC":547196, "GGGAG":1324806, "GGGTA":387764, "GGGTT":546757, "GGGTC":597474, "GGGTG":802390, "GGGCA":868893, "GGGCT":765763, "GGGCC":856501, "GGGCG":487658, "GGGGA":953354, "GGGGT":775329, "GGGGC":876481, "GGGGG":1078827 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 10297650, "total_bases": 607561350, "q20_bases": 593480332, "q30_bases": 576132142, "total_cycles": 59, "quality_curves": { "A":[33.4732,33.1821,32.4873,32.6313,32.8907,32.8747,32.8532,32.8874,33.0139,32.9655,32.9723,32.9022,32.987,32.9824,32.9658,32.9525,32.9341,32.9268,32.938,32.9292,32.9252,32.9065,32.9021,32.9141,32.9163,33.0565,33.0848,33.0573,33.0686,33.059,33.0391,33.0546,33.0273,33.0335,33.0422,33.0326,33.0359,33.012,33.033,33.0243,33.0156,33.0242,33.0013,32.9842,32.9781,32.9794,32.9754,32.9533,32.975,32.9641,32.98,32.9737,32.9566,32.9357,32.9168,32.9201,32.9193,32.9101,32.4994], 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"GC":[0.761462,0.561114,0.578397,0.569496,0.504965,0.471389,0.381987,0.449837,0.43603,0.412754,0.499345,0.478533,0.467578,0.466534,0.472786,0.479563,0.472979,0.47721,0.481367,0.478094,0.478162,0.481287,0.475156,0.476037,0.481958,0.478352,0.485283,0.485802,0.490184,0.489582,0.494699,0.488829,0.491016,0.494326,0.488418,0.488436,0.491749,0.492547,0.491155,0.495944,0.491153,0.486662,0.495041,0.490349,0.489585,0.495493,0.488215,0.489227,0.494369,0.489657,0.496975,0.499251,0.495617,0.497482,0.503157,0.499539,0.49825,0.49773,0.494117] }, "kmer_count": { "AAAAA":2454618, "AAAAT":1293816, "AAAAC":852603, "AAAAG":968781, "AAATA":990522, "AAATT":882576, "AAATC":620507, "AAATG":852504, "AAACA":956073, "AAACT":707661, "AAACC":519902, "AAACG":161487, "AAAGA":912193, "AAAGT":732544, "AAAGC":605232, "AAAGG":758517, "AATAA":807975, "AATAT":616617, "AATAC":470191, "AATAG":404807, "AATTA":595947, "AATTT":910411, "AATTC":593178, "AATTG":400862, "AATCA":592062, "AATCT":594086, "AATCC":540119, "AATCG":117496, "AATGA":646667, "AATGT":593215, "AATGC":457285, "AATGG":614224, "AACAA":745470, "AACAT":639851, "AACAC":528071, "AACAG":653181, "AACTA":350654, "AACTT":652924, "AACTC":497662, "AACTG":595389, "AACCA":555006, "AACCT":594221, "AACCC":435546, "AACCG":114865, "AACGA":131050, "AACGT":138827, "AACGC":123918, "AACGG":150294, "AAGAA":1001865, "AAGAT":592470, "AAGAC":497119, "AAGAG":716653, "AAGTA":487990, "AAGTT":643900, "AAGTC":499691, "AAGTG":565665, "AAGCA":637359, "AAGCT":621170, "AAGCC":517345, "AAGCG":158473, "AAGGA":724387, "AAGGT":522728, "AAGGC":596318, "AAGGG":662945, "ATAAA":853297, "ATAAT":559737, "ATAAC":324430, "ATAAG":367989, "ATATA":481941, "ATATT":689836, "ATATC":348442, "ATATG":362852, "ATACA":539439, "ATACT":393977, "ATACC":271981, "ATACG":111508, "ATAGA":380352, "ATAGT":369382, "ATAGC":292477, "ATAGG":332371, "ATTAA":579722, "ATTAT":526085, "ATTAC":378671, "ATTAG":370790, "ATTTA":686012, "ATTTT":1288657, "ATTTC":798824, "ATTTG":624996, "ATTCA":791121, "ATTCT":761395, "ATTCC":563418, "ATTCG":129606, "ATTGA":465835, "ATTGT":433830, "ATTGC":333654, "ATTGG":387732, "ATCAA":566713, "ATCAT":634223, "ATCAC":520237, "ATCAG":692810, "ATCTA":322491, "ATCTT":797341, "ATCTC":648149, "ATCTG":686619, "ATCCA":645948, "ATCCT":617977, "ATCCC":656723, "ATCCG":150950, "ATCGA":102995, "ATCGT":139381, "ATCGC":121804, "ATCGG":160167, "ATGAA":679030, "ATGAT":533263, "ATGAC":396999, "ATGAG":572701, "ATGTA":438748, "ATGTT":682353, "ATGTC":475377, "ATGTG":538900, "ATGCA":468562, "ATGCT":493779, "ATGCC":570743, "ATGCG":120910, "ATGGA":595478, "ATGGT":595174, "ATGGC":562787, "ATGGG":561656, "ACAAA":1022991, "ACAAT":517035, "ACAAC":399233, "ACAAG":480889, "ACATA":453197, "ACATT":638475, "ACATC":494468, "ACATG":556039, "ACACA":835184, "ACACT":515002, "ACACC":513444, "ACACG":237215, "ACAGA":790188, "ACAGT":589956, "ACAGC":638531, "ACAGG":984028, "ACTAA":362037, "ACTAT":308698, "ACTAC":504879, "ACTAG":252712, "ACTTA":367013, "ACTTT":753635, "ACTTC":635995, 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"AGTTT":803630, "AGTTC":563001, "AGTTG":478732, "AGTCA":602717, "AGTCT":614297, "AGTCC":480017, "AGTCG":126768, "AGTGA":613995, "AGTGT":455047, "AGTGC":598443, "AGTGG":765021, "AGCAA":605121, "AGCAT":502817, "AGCAC":698791, "AGCAG":872794, "AGCTA":395097, "AGCTT":746780, "AGCTC":644380, "AGCTG":886251, "AGCCA":800956, "AGCCT":714637, "AGCCC":566152, "AGCCG":295873, "AGCGA":199962, "AGCGT":143934, "AGCGC":241263, "AGCGG":263906, "AGGAA":937167, "AGGAT":607700, "AGGAC":499673, "AGGAG":1024294, "AGGTA":454108, "AGGTT":605003, "AGGTC":650887, "AGGTG":752435, "AGGCA":1026092, "AGGCT":927126, "AGGCC":656912, "AGGCG":551761, "AGGGA":816944, "AGGGT":605515, "AGGGC":740400, "AGGGG":843412, "TAAAA":1105560, "TAAAT":670932, "TAAAC":424241, "TAAAG":528412, "TAATA":459468, "TAATT":599978, "TAATC":421756, "TAATG":394799, "TAACA":459601, "TAACT":385998, "TAACC":245506, "TAACG":93408, "TAAGA":469379, "TAAGT":375499, "TAAGC":272580, "TAAGG":355864, "TATAA":460403, "TATAT":453947, "TATAC":287664, "TATAG":280807, "TATTA":476308, "TATTT":951832, "TATTC":614840, "TATTG":455217, "TATCA":398802, "TATCT":459694, "TATCC":312853, "TATCG":85146, "TATGA":373580, "TATGT":433587, "TATGC":241867, "TATGG":314104, "TACAA":619107, "TACAT":447770, "TACAC":331390, "TACAG":575959, "TACTA":305291, "TACTT":525338, "TACTC":359571, "TACTG":594368, "TACCA":388219, "TACCT":348257, "TACCC":313697, "TACCG":72409, "TACGA":105439, "TACGT":150112, "TACGC":68359, "TACGG":135915, "TAGAA":523007, "TAGAT":354519, "TAGAC":222593, "TAGAG":427018, "TAGTA":323896, "TAGTT":403498, "TAGTC":325900, "TAGTG":318968, "TAGCA":385328, "TAGCT":429265, "TAGCC":325370, "TAGCG":124893, "TAGGA":447876, "TAGGT":346502, "TAGGC":457439, "TAGGG":370279, "TTAAA":927094, "TTAAT":575410, "TTAAC":355560, "TTAAG":454963, "TTATA":452453, "TTATT":827486, "TTATC":392223, "TTATG":385782, "TTACA":559090, "TTACT":443809, "TTACC":287932, "TTACG":96913, "TTAGA":388145, "TTAGT":368198, "TTAGC":346461, "TTAGG":510432, "TTTAA":927196, "TTTAT":852552, "TTTAC":481525, "TTTAG":490173, "TTTTA":1041589, "TTTTT":2477736, "TTTTC":1220296, "TTTTG":1019607, "TTTCA":1011651, "TTTCT":1400302, "TTTCC":1037924, "TTTCG":191814, "TTTGA":756499, "TTTGT":841512, "TTTGC":611211, "TTTGG":803431, "TTCAA":828837, "TTCAT":879902, "TTCAC":978709, "TTCAG":875058, "TTCTA":562910, "TTCTT":1515332, "TTCTC":1164968, "TTCTG":1060187, "TTCCA":988180, "TTCCT":1113917, "TTCCC":752409, "TTCCG":326222, "TTCGA":189635, "TTCGT":155070, "TTCGC":148403, "TTCGG":208824, "TTGAA":689644, "TTGAT":650906, "TTGAC":494048, "TTGAG":671336, "TTGTA":520785, "TTGTT":836948, "TTGTC":557270, "TTGTG":524543, "TTGCA":535919, "TTGCT":695118, "TTGCC":562542, "TTGCG":149137, "TTGGA":663031, "TTGGT":638720, "TTGGC":668576, "TTGGG":709120, "TCAAA":895160, "TCAAT":574097, "TCAAC":436056, "TCAAG":580986, "TCATA":497608, "TCATT":773843, "TCATC":830765, "TCATG":609134, "TCACA":927740, "TCACT":767978, "TCACC":833765, "TCACG":238989, "TCAGA":718716, "TCAGT":639074, "TCAGC":940390, "TCAGG":925925, "TCTAA":439657, "TCTAT":402368, "TCTAC":389784, "TCTAG":391061, "TCTTA":475760, "TCTTT":1198115, "TCTTC":1353377, "TCTTG":960721, "TCTCA":887352, "TCTCT":1114286, "TCTCC":1110152, "TCTCG":346130, "TCTGA":787432, "TCTGT":873538, "TCTGC":828793, "TCTGG":956417, "TCCAA":733294, "TCCAT":776192, "TCCAC":812271, "TCCAG":1086371, "TCCTA":444046, "TCCTT":1187150, "TCCTC":1137061, "TCCTG":1043512, "TCCCA":1111231, "TCCCT":747051, "TCCCC":867224, "TCCCG":431732, "TCCGA":279897, "TCCGT":292969, "TCCGC":222698, "TCCGG":308325, "TCGAA":198295, "TCGAT":177673, "TCGAC":99928, "TCGAG":165633, "TCGTA":141012, "TCGTT":208859, "TCGTC":224045, "TCGTG":183578, "TCGCA":117375, "TCGCT":267729, "TCGCC":195300, "TCGCG":113017, "TCGGA":193911, "TCGGT":187224, "TCGGC":298872, "TCGGG":325764, "TGAAA":818801, "TGAAT":584834, "TGAAC":508435, "TGAAG":797870, "TGATA":402243, "TGATT":545406, "TGATC":632392, "TGATG":791388, "TGACA":560806, "TGACT":540930, "TGACC":497718, "TGACG":174359, "TGAGA":751810, "TGAGT":513891, "TGAGC":595521, "TGAGG":864920, "TGTAA":574031, "TGTAT":459602, "TGTAC":358278, "TGTAG":529065, "TGTTA":421988, "TGTTT":912068, "TGTTC":622487, "TGTTG":761681, "TGTCA":636030, "TGTCT":755557, "TGTCC":598504, "TGTCG":169037, "TGTGA":573198, "TGTGT":670064, "TGTGC":494305, "TGTGG":742268, "TGCAA":526960, "TGCAT":506794, "TGCAC":456728, "TGCAG":965973, "TGCTA":348916, "TGCTT":749599, "TGCTC":721963, "TGCTG":935540, "TGCCA":759911, "TGCCT":764555, "TGCCC":649852, "TGCCG":294918, "TGCGA":118827, "TGCGT":150171, "TGCGC":178652, "TGCGG":270984, "TGGAA":844409, "TGGAT":573651, "TGGAC":469760, "TGGAG":1077516, "TGGTA":476736, "TGGTT":634539, "TGGTC":755418, "TGGTG":1060932, "TGGCA":805624, "TGGCT":1052848, "TGGCC":770371, "TGGCG":295901, "TGGGA":890295, "TGGGT":661083, "TGGGC":839678, "TGGGG":994930, "CAAAA":1089424, "CAAAT":782350, "CAAAC":577563, "CAAAG":855116, "CAATA":459573, "CAATT":526518, "CAATC":416536, "CAATG":582666, "CAACA":656290, "CAACT":481864, "CAACC":540432, "CAACG":129253, "CAAGA":598160, "CAAGT":535375, "CAAGC":450376, "CAAGG":595149, "CATAA":475035, "CATAT":535134, "CATAC":338964, "CATAG":403164, "CATTA":437915, "CATTT":957343, "CATTC":619734, "CATTG":497546, "CATCA":811516, "CATCT":897115, "CATCC":648192, "CATCG":175028, "CATGA":565841, "CATGT":590017, "CATGC":469659, "CATGG":685541, "CACAA":646548, "CACAT":681439, "CACAC":820242, "CACAG":1149978, "CACTA":505923, "CACTT":719848, "CACTC":613284, "CACTG":886800, "CACCA":1026231, "CACCT":807543, "CACCC":674998, "CACCG":286533, "CACGA":237049, "CACGT":255692, "CACGC":298088, "CACGG":462473, "CAGAA":915472, "CAGAT":610702, "CAGAC":542974, "CAGAG":932604, "CAGTA":452772, "CAGTT":657338, "CAGTC":541789, "CAGTG":950673, "CAGCA":1143473, "CAGCT":1044705, "CAGCC":948396, "CAGCG":275331, "CAGGA":1081970, "CAGGT":845865, "CAGGC":1234678, "CAGGG":1077290, "CTAAA":503430, "CTAAT":356992, "CTAAC":234967, "CTAAG":342329, "CTATA":292389, "CTATT":575728, "CTATC":274073, "CTATG":348372, "CTACA":485279, "CTACT":615761, "CTACC":333444, "CTACG":159964, "CTAGA":353455, "CTAGT":246073, "CTAGC":262847, "CTAGG":351597, "CTTAA":477414, "CTTAT":376148, "CTTAC":290833, "CTTAG":510962, "CTTTA":623392, "CTTTT":1134597, "CTTTC":895312, "CTTTG":837585, "CTTCA":1096462, "CTTCT":1382379, "CTTCC":1053047, "CTTCG":244811, "CTTGA":847575, "CTTGT":700074, "CTTGC":572661, "CTTGG":941525, "CTCAA":683197, "CTCAT":717061, "CTCAC":673514, "CTCAG":1054293, "CTCTA":481720, "CTCTT":965418, "CTCTC":926451, "CTCTG":1010996, "CTCCA":1145918, "CTCCT":1458318, "CTCCC":1074673, "CTCCG":449250, "CTCGA":233242, "CTCGT":301152, "CTCGC":268449, "CTCGG":400096, "CTGAA":812107, "CTGAT":714890, "CTGAC":493129, "CTGAG":903957, "CTGTA":618997, "CTGTT":748644, "CTGTC":686883, "CTGTG":826351, "CTGCA":870732, "CTGCT":1054143, "CTGCC":869889, "CTGCG":267699, "CTGGA":1140272, "CTGGT":896410, "CTGGC":832149, "CTGGG":1342983, "CCAAA":833974, "CCAAT":500725, "CCAAC":488740, "CCAAG":682574, "CCATA":510548, "CCATT":648142, "CCATC":708555, "CCATG":670995, "CCACA":926140, "CCACT":915234, "CCACC":921223, "CCACG":370404, "CCAGA":795061, "CCAGT":682014, "CCAGC":1052261, "CCAGG":1353457, "CCTAA":315585, "CCTAT":291694, "CCTAC":378909, "CCTAG":312530, "CCTTA":516580, "CCTTT":807349, "CCTTC":949423, "CCTTG":817144, "CCTCA":924414, "CCTCT":972206, "CCTCC":1304009, "CCTCG":389650, "CCTGA":696254, "CCTGT":749944, "CCTGC":893847, "CCTGG":1296354, "CCCAA":687172, "CCCAT":590666, "CCCAC":925408, "CCCAG":1199686, "CCCTA":345625, "CCCTT":643566, "CCCTC":819556, "CCCTG":766449, "CCCCA":884966, "CCCCT":701581, "CCCCC":770789, "CCCCG":578662, "CCCGA":307995, "CCCGT":236931, "CCCGC":516907, "CCCGG":583833, "CCGAA":255271, "CCGAT":143748, "CCGAC":315032, "CCGAG":317903, "CCGTA":114028, "CCGTT":255284, "CCGTC":266868, "CCGTG":266729, "CCGCA":237377, "CCGCT":390262, "CCGCC":436891, "CCGCG":223727, "CCGGA":284783, "CCGGT":328249, "CCGGC":484738, "CCGGG":590111, "CGAAA":131983, "CGAAT":122831, "CGAAC":194001, "CGAAG":268489, "CGATA":79100, "CGATT":142058, "CGATC":367171, "CGATG":236982, "CGACA":142127, "CGACT":144044, "CGACC":255904, "CGACG":166990, "CGAGA":216944, "CGAGT":147819, "CGAGC":213015, "CGAGG":343091, "CGTAA":95994, "CGTAT":106816, "CGTAC":101187, "CGTAG":158841, "CGTTA":85217, "CGTTT":280530, "CGTTC":305741, "CGTTG":179109, "CGTCA":192526, "CGTCT":274125, "CGTCC":253085, "CGTCG":137542, "CGTGA":188206, "CGTGT":187566, "CGTGC":209343, "CGTGG":287351, "CGCAA":114227, "CGCAT":118040, "CGCAC":212983, "CGCAG":274932, "CGCTA":119070, "CGCTT":226693, "CGCTC":405661, "CGCTG":277523, "CGCCA":297412, "CGCCT":337768, "CGCCC":326514, "CGCCG":268971, "CGCGA":270123, "CGCGT":116928, "CGCGC":235356, "CGCGG":273010, "CGGAA":208956, "CGGAT":197773, "CGGAC":194382, "CGGAG":372316, "CGGTA":135161, "CGGTT":244909, "CGGTC":244853, "CGGTG":286347, "CGGCA":272762, "CGGCT":281894, "CGGCC":497584, "CGGCG":412234, "CGGGA":549042, "CGGGT":246372, "CGGGC":456244, "CGGGG":634565, "GAAAA":992342, 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"TTTAC":397477, "TTTAG":441553, "TTTTA":887376, "TTTTT":1955721, "TTTTC":865788, "TTTTG":956945, "TTTCA":729538, "TTTCT":1039207, "TTTCC":733993, "TTTCG":143330, "TTTGA":845678, "TTTGT":854883, "TTTGC":561845, "TTTGG":799886, "TTCAA":641136, "TTCAT":609413, "TTCAC":518889, "TTCAG":761719, "TTCTA":474004, "TTCTT":877866, "TTCTC":780487, "TTCTG":1032057, "TTCCA":739773, "TTCCT":928936, "TTCCC":716865, "TTCCG":215671, "TTCGA":221757, "TTCGT":183525, "TTCGC":154415, "TTCGG":329920, "TTGAA":800087, "TTGAT":594301, "TTGAC":403226, "TTGAG":872211, "TTGTA":455957, "TTGTT":688162, "TTGTC":430375, "TTGTG":617126, "TTGCA":521417, "TTGCT":628266, "TTGCC":590627, "TTGCG":126684, "TTGGA":730897, "TTGGT":557979, "TTGGC":582168, "TTGGG":661536, "TCAAA":672466, "TCAAT":393088, "TCAAC":443792, "TCAAG":751033, "TCATA":318534, "TCATT":590748, "TCATC":604205, "TCATG":575783, "TCACA":550351, "TCACT":631779, "TCACC":711838, "TCACG":181505, "TCAGA":749479, "TCAGT":592113, "TCAGC":701133, "TCAGG":721903, 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"CTACC":394316, "CTACG":159599, "CTAGA":376103, "CTAGT":245578, "CTAGC":236480, "CTAGG":363354, "CTTAA":393224, "CTTAT":325846, "CTTAC":296056, "CTTAG":319668, "CTTTA":456797, "CTTTT":859137, "CTTTC":639238, "CTTTG":836411, "CTTCA":774981, "CTTCT":839607, "CTTCC":905696, "CTTCG":303902, "CTTGA":805027, "CTTGT":480274, "CTTGC":456620, "CTTGG":731630, "CTCAA":623777, "CTCAT":563750, "CTCAC":640415, "CTCAG":942609, "CTCTA":413470, "CTCTT":698700, "CTCTC":689787, "CTCTG":983591, "CTCCA":879335, "CTCCT":1019616, "CTCCC":1062862, "CTCCG":376416, "CTCGA":186535, "CTCGT":192513, "CTCGC":270969, "CTCGG":534124, "CTGAA":916253, "CTGAT":626786, "CTGAC":600572, "CTGAG":1212408, "CTGTA":771533, "CTGTT":642681, "CTGTC":693506, "CTGTG":990626, "CTGCA":869582, "CTGCT":901734, "CTGCC":1022009, "CTGCG":344982, "CTGGA":1286163, "CTGGT":745337, "CTGGC":1032998, "CTGGG":1423392, "CCAAA":771146, "CCAAT":340423, "CCAAC":526705, "CCAAG":905051, "CCATA":285158, "CCATT":567441, "CCATC":699630, "CCATG":774912, "CCACA":707586, "CCACT":628808, "CCACC":964066, "CCACG":319045, "CCAGA":953126, "CCAGT":648485, "CCAGC":1238631, "CCAGG":1413989, "CCTAA":389119, "CCTAT":312667, "CCTAC":389685, "CCTAG":348147, "CCTTA":336919, "CCTTT":670689, "CCTTC":802698, "CCTTG":623583, "CCTCA":876138, "CCTCT":790101, "CCTCC":1244386, "CCTCG":365628, "CCTGA":928764, "CCTGT":926779, "CCTGC":953303, "CCTGG":1363784, "CCCAA":678580, "CCCAT":582377, "CCCAC":683917, "CCCAG":1509627, "CCCTA":349183, "CCCTT":635613, "CCCTC":835933, "CCCTG":1033800, "CCCCA":926863, "CCCCT":763109, "CCCCC":804453, "CCCCG":546695, "CCCGA":346007, "CCCGT":267299, "CCCGC":484201, "CCCGG":583265, "CCGAA":257573, "CCGAT":267444, "CCGAC":221896, "CCGAG":446438, "CCGTA":105687, "CCGTT":142920, "CCGTC":267325, "CCGTG":356085, "CCGCA":360041, "CCGCT":288242, "CCGCC":671120, "CCGCG":345050, "CCGGA":309838, "CCGGT":214536, "CCGGC":582138, "CCGGG":567421, "CGAAA":241081, "CGAAT":140476, "CGAAC":156537, "CGAAG":278545, "CGATA":100553, "CGATT":129420, "CGATC":260686, "CGATG":196655, "CGACA":200785, "CGACT":139882, "CGACC":226689, "CGACG":162664, "CGAGA":380246, "CGAGT":229727, "CGAGC":290747, "CGAGG":441464, "CGTAA":86232, "CGTAT":82113, "CGTAC":87674, "CGTAG":106793, "CGTTA":79131, "CGTTT":165383, "CGTTC":160315, "CGTTG":160948, "CGTCA":180965, "CGTCT":225937, "CGTCC":290013, "CGTCG":145011, "CGTGA":273106, "CGTGT":297051, "CGTGC":379927, "CGTGG":454202, "CGCAA":182086, "CGCAT":135912, "CGCAC":279129, "CGCAG":280357, "CGCTA":247005, "CGCTT":409330, "CGCTC":300268, "CGCTG":316132, "CGCCA":368005, "CGCCT":400590, "CGCCC":472785, "CGCCG":422412, "CGCGA":137624, "CGCGT":218972, "CGCGC":288179, "CGCGG":314816, "CGGAA":301113, "CGGAT":153334, "CGGAC":203502, "CGGAG":419190, "CGGTA":90947, "CGGTT":141809, "CGGTC":243926, "CGGTG":375868, "CGGCA":324640, "CGGCT":396607, "CGGCC":538489, "CGGCG":436264, "CGGGA":570592, "CGGGT":403432, "CGGGC":447896, "CGGGG":582789, "GAAAA":1210607, "GAAAT":792885, "GAAAC":742187, "GAAAG":955192, "GAATA":405133, "GAATT":579472, "GAATC":445543, "GAATG":655985, "GAACA":665590, "GAACT":611966, "GAACC":566037, "GAACG":273719, "GAAGA":1432357, "GAAGT":715614, "GAAGC":875704, "GAAGG":1107209, "GATAA":387888, "GATAT":328606, "GATAC":247459, "GATAG":272329, "GATTA":405718, "GATTT":592965, "GATTC":474024, "GATTG":457526, "GATCA":547666, "GATCT":559570, "GATCC":494247, "GATCG":556877, "GATGA":848510, "GATGT":519623, "GATGC":511483, "GATGG":768333, "GACAA":567289, "GACAT":512242, "GACAC":426944, "GACAG":719651, "GACTA":295033, "GACTT":519031, "GACTC":454088, "GACTG":561328, "GACCA":691439, "GACCT":639989, "GACCC":573570, "GACCG":262392, "GACGA":257867, "GACGT":191146, "GACGC":212247, "GACGG":291772, "GAGAA":1211771, "GAGAT":718280, "GAGAC":759504, "GAGAG":987100, "GAGTA":361396, "GAGTT":697111, "GAGTC":536740, "GAGTG":667675, "GAGCA":747095, "GAGCT":763302, "GAGCC":872710, "GAGCG":384469, "GAGGA":1502239, "GAGGT":803771, "GAGGC":1226901, "GAGGG":769793, "GTAAA":426235, "GTAAT":362210, "GTAAC":245816, "GTAAG":266767, "GTATA":250430, "GTATT":396086, "GTATC":224180, "GTATG":311689, "GTACA":338816, "GTACT":289403, "GTACC":282543, "GTACG":113921, "GTAGA":387666, "GTAGT":538513, "GTAGC":325993, "GTAGG":257316, "GTTAA":327608, "GTTAT":287939, "GTTAC":266774, "GTTAG":241730, "GTTTA":398994, "GTTTT":788033, "GTTTC":549962, "GTTTG":616340, "GTTCA":515401, "GTTCT":694764, "GTTCC":499238, "GTTCG":263386, "GTTGA":490827, "GTTGT":403387, "GTTGC":452124, "GTTGG":567011, "GTCAA":414426, "GTCAT":417047, "GTCAC":461166, "GTCAG":528476, "GTCTA":235436, "GTCTT":525307, "GTCTC":598970, "GTCTG":590023, "GTCCA":533737, "GTCCT":559829, "GTCCC":727348, "GTCCG":315810, "GTCGA":121862, "GTCGT":199640, "GTCGC":182602, "GTCGG":274374, "GTGAA":831019, "GTGAT":593506, "GTGAC":555605, "GTGAG":687409, "GTGTA":336662, "GTGTT":560381, "GTGTC":642709, "GTGTG":839533, "GTGCA":526846, "GTGCT":638716, "GTGCC":713719, "GTGCG":418585, "GTGGA":919089, "GTGGT":718432, "GTGGC":899936, "GTGGG":945818, "GCAAA":605252, "GCAAT":345466, "GCAAC":410953, "GCAAG":634834, "GCATA":225073, "GCATT":427886, "GCATC":508824, "GCATG":511666, "GCACA":501829, "GCACT":542568, "GCACC":516515, "GCACG":224861, "GCAGA":870523, "GCAGT":656455, "GCAGC":817581, "GCAGG":900279, "GCTAA":332232, "GCTAT":415598, "GCTAC":507776, "GCTAG":295436, "GCTTA":260658, "GCTTT":588171, "GCTTC":608712, "GCTTG":701071, "GCTCA":685934, "GCTCT":632377, "GCTCC":666225, "GCTCG":243783, "GCTGA":1093611, "GCTGT":832148, "GCTGC":910924, "GCTGG":1383063, "GCCAA":693511, "GCCAT":621466, "GCCAC":719684, "GCCAG":952403, "GCCTA":348985, "GCCTT":609436, "GCCTC":906824, "GCCTG":1150545, "GCCCA":900036, "GCCCT":748371, "GCCCC":805941, "GCCCG":480383, "GCCGA":445583, "GCCGT":238993, "GCCGC":532962, "GCCGG":506663, "GCGAA":184416, "GCGAT":152894, "GCGAC":196252, "GCGAG":297015, "GCGTA":69494, "GCGTT":139669, "GCGTC":229904, "GCGTG":463510, "GCGCA":232984, "GCGCT":385043, "GCGCC":424888, "GCGCG":385331, "GCGGA":284058, "GCGGT":284755, "GCGGC":491020, "GCGGG":582370, "GGAAA":1054830, "GGAAT":586774, "GGAAC":561556, "GGAAG":1208255, "GGATA":322566, "GGATT":581461, "GGATC":661782, "GGATG":698182, "GGACA":665929, "GGACT":542806, "GGACC":635573, "GGACG":296935, "GGAGA":1193016, "GGAGT":843549, "GGAGC":924340, "GGAGG":1759082, "GGTAA":304401, "GGTAT":275357, "GGTAC":230654, "GGTAG":296376, "GGTTA":253091, "GGTTT":540786, "GGTTC":462099, "GGTTG":533270, "GGTCA":524724, "GGTCT":528453, "GGTCC":442875, "GGTCG":236924, "GGTGA":807951, "GGTGT":741859, "GGTGC":570160, "GGTGG":1232050, "GGCAA":592776, "GGCAT":607263, "GGCAC":506412, "GGCAG":937747, "GGCTA":378748, "GGCTT":572869, "GGCTC":726238, "GGCTG":1642701, "GGCCA":882770, "GGCCT":749745, "GGCCC":875862, "GGCCG":559738, "GGCGA":283839, "GGCGT":309356, "GGCGC":481014, "GGCGG":680806, "GGGAA":860742, "GGGAT":559802, "GGGAC":612721, "GGGAG":1325284, "GGGTA":273405, "GGGTT":538024, "GGGTC":445329, "GGGTG":856039, "GGGCA":703135, "GGGCT":826349, "GGGCC":821704, "GGGCG":478900, "GGGGA":864740, "GGGGT":544593, "GGGGC":768975, "GGGGG":3188780 }, "overrepresented_sequences": { } }, "command": "fastp -w 2 --in1 /scratch/tvdkreeke/GHE_RNAseq/GHE_exp2/results/fastq/46086_1_TK_RNA_10_D21_PL_T5_A69_R1.fastq.gz --in2 /scratch/tvdkreeke/GHE_RNAseq/GHE_exp2/results/fastq/46086_1_TK_RNA_10_D21_PL_T5_A69_R2.fastq.gz --out1 /scratch/tvdkreeke/GHE_RNAseq/GHE_exp2/results/fastq_trimmed/46086_1_TK_RNA_10_D21_PL_T5_A69_R1_trimmed.fastq.gz --out2 /scratch/tvdkreeke/GHE_RNAseq/GHE_exp2/results/fastq_trimmed/46086_1_TK_RNA_10_D21_PL_T5_A69_R2_trimmed.fastq.gz -h /scratch/tvdkreeke/GHE_RNAseq/GHE_exp2/results/qc/trimming/46086_1_TK_RNA_10_D21_PL_T5_A69.fastp.html -j /scratch/tvdkreeke/GHE_RNAseq/GHE_exp2/results/qc/trimming/46086_1_TK_RNA_10_D21_PL_T5_A69.fastp.json " }