############################################ # Single-cell / single-nucleus sequencing coverage ############################################ track SingleCellCoverage shortLabel Single-cell longLabel Single-cell and single-nucleus coverage tracks type bigWig dimensions dimX=view dimY=samples visibility full subGroup1 view Views scRNA=scRNA snRNA=snRNA snATAC=snATAC subGroup2 samples Samples ALL=ALL CT_W8=CT_W8 CT_W24=CT_W24 PS_W8=PS_W8 PS_W24=PS_W24 autoScale group compositeTrack on ############################################ # scRNA-seq ############################################ track scRNA_view shortLabel scRNA longLabel scRNA-seq coverage type bigWig parent SingleCellCoverage view scRNA visibility full maxHeightPixels 100:16:8 track scRNA_ALL bigDataUrl scRNA_ALL_coverage.bw shortLabel scRNA ALL longLabel scRNA-seq ALL type bigWig color 0,102,204 parent scRNA_view priority 1.0 visibility full subGroups samples=ALL view=scRNA track scRNA_CT_W8 bigDataUrl scRNA_CT_W8_coverage.bw shortLabel scRNA CT W8 longLabel scRNA-seq CT W8 type bigWig color 51,153,255 parent scRNA_view priority 2.0 visibility full subGroups samples=CT_W8 view=scRNA track scRNA_CT_W24 bigDataUrl scRNA_CT_W24_coverage.bw shortLabel scRNA CT W24 longLabel scRNA-seq CT W24 type bigWig color 0,76,153 parent scRNA_view priority 3.0 visibility full subGroups samples=CT_W24 view=scRNA track scRNA_PS_W8 bigDataUrl scRNA_PS_W8_coverage.bw shortLabel scRNA PS W8 longLabel scRNA-seq PS W8 type bigWig color 102,178,255 parent scRNA_view priority 4.0 visibility full subGroups samples=PS_W8 view=scRNA track scRNA_PS_W24 bigDataUrl scRNA_PS_W24_coverage.bw shortLabel scRNA PS W24 longLabel scRNA-seq PS W24 type bigWig color 0,51,102 parent scRNA_view priority 5.0 visibility full subGroups samples=PS_W24 view=scRNA ############################################ # snRNA-seq ############################################ track snRNA_view shortLabel snRNA longLabel snRNA-seq coverage type bigWig parent SingleCellCoverage view snRNA visibility full maxHeightPixels 100:50:8 track snRNA_ALL bigDataUrl snRNA_ALL_coverage.bw shortLabel snRNA ALL longLabel snRNA-seq ALL type bigWig color 0,153,0 parent snRNA_view priority 6.0 visibility full subGroups samples=ALL view=snRNA track snRNA_CT_W8 bigDataUrl snRNA_CT_W8_coverage.bw shortLabel snRNA CT W8 longLabel snRNA-seq CT W8 type bigWig color 51,204,51 parent snRNA_view priority 7.0 visibility full subGroups samples=CT_W8 view=snRNA track snRNA_CT_W24 bigDataUrl snRNA_CT_W24_coverage.bw shortLabel snRNA CT W24 longLabel snRNA-seq CT W24 type bigWig color 0,102,0 parent snRNA_view priority 8.0 visibility full subGroups samples=CT_W24 view=snRNA track snRNA_PS_W8 bigDataUrl snRNA_PS_W8_coverage.bw shortLabel snRNA PS W8 longLabel snRNA-seq PS W8 type bigWig color 102,255,102 parent snRNA_view priority 9.0 visibility full subGroups samples=PS_W8 view=snRNA track snRNA_PS_W24 bigDataUrl snRNA_PS_W24_coverage.bw shortLabel snRNA PS W24 longLabel snRNA-seq PS W24 type bigWig color 0,76,0 parent snRNA_view priority 10.0 visibility full subGroups samples=PS_W24 view=snRNA ############################################ # snATAC-seq ############################################ track snATAC_view shortLabel snATAC longLabel snATAC-seq coverage type bigWig parent SingleCellCoverage view snATAC visibility full maxHeightPixels 100:50:8 track snATAC_ALL bigDataUrl snATAC_ALL_coverage.bw shortLabel snATAC ALL longLabel snATAC-seq ALL type bigWig color 204,0,0 parent snATAC_view priority 11.0 visibility full subGroups samples=ALL view=snATAC track snATAC_CT_W8 bigDataUrl snATAC_CT_W8_coverage.bw shortLabel snATAC CT W8 longLabel snATAC-seq CT W8 type bigWig color 255,51,51 parent snATAC_view priority 12.0 visibility full subGroups samples=CT_W8 view=snATAC track snATAC_CT_W24 bigDataUrl snATAC_CT_W24_coverage.bw shortLabel snATAC CT W24 longLabel snATAC-seq CT W24 type bigWig color 153,0,0 parent snATAC_view priority 13.0 visibility full subGroups samples=CT_W24 view=snATAC track snATAC_PS_W8 bigDataUrl snATAC_PS_W8_coverage.bw shortLabel snATAC PS W8 longLabel snATAC-seq PS W8 type bigWig color 255,102,102 parent snATAC_view priority 14.0 visibility full subGroups samples=PS_W8 view=snATAC track snATAC_PS_W24 bigDataUrl snATAC_PS_W24_coverage.bw shortLabel snATAC PS W24 longLabel snATAC-seq PS W24 type bigWig color 102,0,0 parent snATAC_view priority 15.0 visibility full subGroups samples=PS_W24 view=snATAC