Sample	raw_total_sequences	filtered_sequences	sequences	is_sorted	1st_fragments	last_fragments	reads_mapped	reads_mapped_and_paired	reads_unmapped	reads_properly_paired	reads_paired	reads_duplicated	reads_MQ0	reads_QC_failed	non-primary_alignments	supplementary_alignments	total_length	total_first_fragment_length	total_last_fragment_length	bases_mapped	bases_mapped_(cigar)	bases_trimmed	bases_duplicated	mismatches	error_rate	average_length	average_first_fragment_length	average_last_fragment_length	maximum_length	maximum_first_fragment_length	maximum_last_fragment_length	average_quality	insert_size_average	insert_size_standard_deviation	inward_oriented_pairs	outward_oriented_pairs	pairs_with_other_orientation	pairs_on_different_chromosomes	percentage_of_properly_paired_reads_(%)	reads_mapped_percent	reads_mapped_and_paired_percent	reads_unmapped_percent	reads_properly_paired_percent	reads_paired_percent	reads_duplicated_percent	reads_MQ0_percent	reads_QC_failed_percent
45937_Exp215_GHEtest_1_S1_IPSC_mRNA_A21	5642706.0	0.0	5642706.0	1.0	2821353.0	2821353.0	5642706.0	5642706.0	0.0	5642706.0	5642706.0	1587314.0	292940.0	0.0	2189084.0	0.0	332864310.0	166432155.0	166432155.0	332864310.0	331879469.0	0.0	93638306.0	0.0	0.0	58.0	59.0	59.0	59.0	59.0	59.0	33.4	1395.3	2248.7	2820594.0	759.0	0.0	0.0	100.0	100.0	100.0	0.0	100.0	100.0	28.13036865645667	5.191480824980071	0.0
45938_Exp215_GHEtest_2_S2_IPSC_mRNA_A22	3205702.0	0.0	3205702.0	1.0	1602851.0	1602851.0	3205702.0	3205702.0	0.0	3205702.0	3205702.0	1148662.0	31294.0	0.0	359552.0	0.0	189019606.0	94509803.0	94509803.0	189019606.0	187226861.0	0.0	67747426.0	0.0	0.0	58.0	59.0	59.0	59.0	59.0	59.0	33.3	890.0	1845.6	1599369.0	3482.0	0.0	0.0	100.0	100.0	100.0	0.0	100.0	100.0	35.83183964074016	0.9761980371226022	0.0
45939_Exp215_GHEtest_3_S1_IPSC_noRibo_A23	5428310.0	0.0	5428310.0	1.0	2714155.0	2714155.0	5428310.0	5428310.0	0.0	5428310.0	5428310.0	3874380.0	4231126.0	0.0	27518800.0	0.0	319786422.0	159893211.0	159893211.0	319786422.0	318708653.0	0.0	228348038.0	0.0	0.0	58.0	59.0	59.0	59.0	59.0	59.0	33.4	406.3	1127.8	2695996.0	18159.0	0.0	0.0	100.0	100.0	100.0	0.0	100.0	100.0	71.3735950968165	77.94554843035863	0.0
45940_Exp215_GHEtest_4_S2_IPSC_noRibo_A24	5785506.0	0.0	5785506.0	1.0	2892753.0	2892753.0	5785506.0	5785506.0	0.0	5785506.0	5785506.0	3962536.0	4235026.0	0.0	27619586.0	0.0	340758612.0	170379306.0	170379306.0	340758612.0	339475291.0	0.0	233496042.0	0.0	0.0	58.0	59.0	59.0	59.0	59.0	59.0	33.4	403.5	1107.3	2870811.0	21942.0	0.0	0.0	100.0	100.0	100.0	0.0	100.0	100.0	68.49074220992944	73.20061546907046	0.0
45941_Exp215_GHEtest_5_S2_IPSC_noRibo_A01	5546528.0	0.0	5546528.0	1.0	2773264.0	2773264.0	5546528.0	5546528.0	0.0	5546528.0	5546528.0	1211814.0	182492.0	0.0	1568100.0	0.0	327136970.0	163568485.0	163568485.0	327136970.0	326087403.0	0.0	71477726.0	0.0	0.0	58.0	59.0	59.0	59.0	59.0	59.0	33.4	1125.9	2060.3	2771326.0	1938.0	0.0	0.0	100.0	100.0	100.0	0.0	100.0	100.0	21.848154376936346	3.2902024473688765	0.0
45942_Exp215_GHEtest_6_S2_IPSC_noRibo_A02	4729536.0	0.0	4729536.0	1.0	2364768.0	2364768.0	4729536.0	4729536.0	0.0	4729536.0	4729536.0	955348.0	154684.0	0.0	1335366.0	0.0	278982474.0	139491237.0	139491237.0	278982474.0	278076480.0	0.0	56355946.0	0.0	0.0	58.0	59.0	59.0	59.0	59.0	59.0	33.4	1226.7	2151.6	2363778.0	990.0	0.0	0.0	100.0	100.0	100.0	0.0	100.0	100.0	20.199613661889877	3.270595677884681	0.0