Sample	raw_total_sequences	filtered_sequences	sequences	is_sorted	1st_fragments	last_fragments	reads_mapped	reads_mapped_and_paired	reads_unmapped	reads_properly_paired	reads_paired	reads_duplicated	reads_MQ0	reads_QC_failed	non-primary_alignments	total_length	total_first_fragment_length	total_last_fragment_length	bases_mapped	bases_mapped_(cigar)	bases_trimmed	bases_duplicated	mismatches	error_rate	average_length	average_first_fragment_length	average_last_fragment_length	maximum_length	maximum_first_fragment_length	maximum_last_fragment_length	average_quality	insert_size_average	insert_size_standard_deviation	inward_oriented_pairs	outward_oriented_pairs	pairs_with_other_orientation	pairs_on_different_chromosomes	percentage_of_properly_paired_reads_(%)	reads_mapped_percent	reads_mapped_and_paired_percent	reads_unmapped_percent	reads_properly_paired_percent	reads_paired_percent	reads_duplicated_percent	reads_MQ0_percent	reads_QC_failed_percent
Xt_stage105_rep2	185787864.0	0.0	185787864.0	1.0	92893932.0	92893932.0	179718928.0	179277268.0	6068936.0	178387316.0	185787864.0	153205173.0	34636910.0	0.0	0.0	7739942559.0	3870045793.0	3869896766.0	7488311395.0	7443613151.0	0.0	6389586587.0	31459818.0	0.004226418	41.0	42.0	42.0	42.0	42.0	42.0	34.0	96.6	55.4	85089297.0	4401352.0	11197.0	136788.0	96.0	96.73340557917174	96.49568283964986	3.2665944208282625	96.01666769795038	100.0	82.46242230332118	18.64325755960034	0.0
Xt_stage105_rep3	40667986.0	0.0	40667986.0	1.0	20333993.0	20333993.0	38457086.0	38222972.0	2210900.0	37943792.0	40667986.0	17006726.0	6386782.0	0.0	0.0	1543388134.0	771747227.0	771640907.0	1459790244.0	1452036218.0	0.0	645999164.0	10255843.0	0.007063076	37.0	38.0	38.0	38.0	38.0	38.0	34.7	152.4	94.1	18877360.0	167177.0	5161.0	61788.0	93.3	94.56353702885606	93.98786554121466	5.4364629711439365	93.30137961589739	100.0	41.8184613322135	15.704692137938672	0.0
Xt_stage12_rep1	128500748.0	0.0	128500748.0	1.0	64250374.0	64250374.0	122319828.0	120736370.0	6180920.0	119532688.0	128500748.0	75460009.0	24216379.0	0.0	137804.0	8747260912.0	4373739515.0	4373521397.0	8322725470.0	8013436662.0	0.0	5156392064.0	154226650.0	0.01924601	68.0	68.0	68.0	75.0	75.0	75.0	32.4	130.8	85.3	49284761.0	10623005.0	31585.0	428834.0	93.0	95.1899735245121	93.95771766246838	4.810026475487909	93.02100560535258	100.0	58.723400582851085	18.845321429568642	0.0
Xt_stage12_rep2	296818884.0	0.0	296818884.0	1.0	148409442.0	148409442.0	279490070.0	275903976.0	17328814.0	274764182.0	296818884.0	239704521.0	40572658.0	0.0	167028.0	20115764203.0	10058241230.0	10057522973.0	18949372152.0	18407468105.0	0.0	16382931399.0	325133099.0	0.01766311	67.0	68.0	68.0	75.0	75.0	75.0	32.5	109.7	62.5	111915111.0	25833136.0	13549.0	190192.0	92.6	94.16182226465078	92.95364643982693	5.838177735349211	92.56964324412729	100.0	80.75784052877175	13.669163313746575	0.0
Xt_stage16_rep1	34601576.0	0.0	34601576.0	1.0	17300788.0	17300788.0	11763748.0	11540436.0	22837828.0	11501878.0	34601576.0	6745093.0	2122177.0	0.0	0.0	1441525773.0	720770534.0	720755239.0	489857470.0	434067655.0	0.0	281449381.0	7581758.0	0.01746677	41.0	42.0	42.0	42.0	42.0	42.0	32.1	72.2	43.4	4946773.0	815082.0	3658.0	4705.0	33.2	33.997723109490735	33.3523421014118	66.00227689050926	33.240907870786	100.0	19.493600522704515	6.133180176532999	0.0
Xt_stage16_rep2	139580212.0	0.0	139580212.0	1.0	69790106.0	69790106.0	15044621.0	14646694.0	124535591.0	14600454.0	139580212.0	7528865.0	2462665.0	0.0	0.0	5824413151.0	2912224226.0	2912188925.0	624684252.0	477657455.0	0.0	312909534.0	8552783.0	0.01790568	41.0	42.0	42.0	42.0	42.0	42.0	31.7	63.1	57.9	5412683.0	1901821.0	2549.0	6294.0	10.5	10.77847696634821	10.493388561410123	89.22152303365179	10.46026065643173	100.0	5.393934349376114	1.7643367671629557	0.0
Xt_stage26_rep1	66233360.0	0.0	66233360.0	1.0	33116680.0	33116680.0	63096076.0	62868484.0	3137284.0	62652286.0	66233360.0	12069620.0	12304968.0	0.0	0.0	2503815813.0	1252029089.0	1251786724.0	2385880337.0	2369481815.0	0.0	456754573.0	8671089.0	0.003659488	37.0	38.0	38.0	38.0	38.0	38.0	34.7	89.7	52.5	30092795.0	1261415.0	7264.0	72768.0	94.6	95.26328726188737	94.91966586022512	4.736712738112637	94.59324726995581	100.0	18.22287137478757	18.578202887487514	0.0
Xt_stage26_rep2	57301132.0	0.0	57301132.0	1.0	28650566.0	28650566.0	54701534.0	54446614.0	2599598.0	54211586.0	57301132.0	7072480.0	11021467.0	0.0	0.0	2167212120.0	1083715922.0	1083496198.0	2069565988.0	2053414616.0	0.0	267657753.0	8052468.0	0.003921501	37.0	38.0	38.0	38.0	38.0	38.0	34.7	97.4	53.6	26133682.0	996677.0	9372.0	83576.0	94.6	95.4632693818335	95.01839160873821	4.536730618166496	94.60822868211399	100.0	12.342653195751875	19.234291915908397	0.0
Xt_stage34_rep1	19677082.0	0.0	19677082.0	1.0	9838541.0	9838541.0	18579970.0	18455998.0	1097112.0	18391942.0	19677082.0	1389269.0	4306474.0	0.0	0.0	743119956.0	371591741.0	371528215.0	701865086.0	694263402.0	0.0	52550320.0	5298201.0	0.007631399	37.0	38.0	38.0	38.0	38.0	38.0	33.2	90.5	51.0	8769689.0	431844.0	2514.0	23952.0	93.5	94.42441719763124	93.79438475684555	5.575582802368766	93.46884868396646	100.0	7.060340552527046	21.88573488691057	0.0
Xt_stage34_rep2	115967470.0	0.0	115967470.0	1.0	57983735.0	57983735.0	111418641.0	110883874.0	4548829.0	109420944.0	115967470.0	10009531.0	34644997.0	0.0	0.0	4390030203.0	2195370508.0	2194659695.0	4219704871.0	4180424618.0	0.0	378524884.0	18438019.0	0.004410562	37.0	38.0	38.0	38.0	38.0	38.0	34.5	98.8	58.0	53988734.0	1139939.0	24109.0	289155.0	94.4	96.07749569771592	95.6163603465696	3.92250430228408	94.35486003100696	100.0	8.63132652630949	29.87475453245639	0.0
Xt_stage9_rep2	281096402.0	0.0	281096402.0	1.0	140548201.0	140548201.0	254038469.0	253196306.0	27057933.0	251983456.0	281096402.0	226789585.0	61393259.0	0.0	0.0	11725633569.0	5862904039.0	5862729530.0	10598144468.0	10516636618.0	0.0	9470027983.0	52106419.0	0.004954666	41.0	42.0	42.0	42.0	42.0	42.0	33.9	118.7	72.4	121467467.0	4784089.0	29849.0	316748.0	89.6	90.37414466799187	90.07454531559603	9.625855332008127	89.64307412230768	100.0	80.68035854831041	21.8406420584494	0.0