Sample command GSM1481260 fastp -w 2 --in1 /home/siebrenf/tdewijs/fastq/GSM1481260_R1.fastq.gz --in2 /home/siebrenf/tdewijs/fastq/GSM1481260_R2.fastq.gz --out1 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481260_R1_trimmed.fastq.gz --out2 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481260_R2_trimmed.fastq.gz -h /home/siebrenf/tdewijs/results/qc/trimming/GSM1481260.fastp.html -j /home/siebrenf/tdewijs/results/qc/trimming/GSM1481260.fastp.json GSM1481261 fastp -w 2 --in1 /home/siebrenf/tdewijs/fastq/GSM1481261_R1.fastq.gz --in2 /home/siebrenf/tdewijs/fastq/GSM1481261_R2.fastq.gz --out1 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481261_R1_trimmed.fastq.gz --out2 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481261_R2_trimmed.fastq.gz -h /home/siebrenf/tdewijs/results/qc/trimming/GSM1481261.fastp.html -j /home/siebrenf/tdewijs/results/qc/trimming/GSM1481261.fastp.json GSM1481262 fastp -w 2 --in1 /home/siebrenf/tdewijs/fastq/GSM1481262_R1.fastq.gz --in2 /home/siebrenf/tdewijs/fastq/GSM1481262_R2.fastq.gz --out1 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481262_R1_trimmed.fastq.gz --out2 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481262_R2_trimmed.fastq.gz -h /home/siebrenf/tdewijs/results/qc/trimming/GSM1481262.fastp.html -j /home/siebrenf/tdewijs/results/qc/trimming/GSM1481262.fastp.json GSM1481263 fastp -w 2 --in1 /home/siebrenf/tdewijs/fastq/GSM1481263_R1.fastq.gz --in2 /home/siebrenf/tdewijs/fastq/GSM1481263_R2.fastq.gz --out1 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481263_R1_trimmed.fastq.gz --out2 /home/siebrenf/tdewijs/results/fastq_trimmed/GSM1481263_R2_trimmed.fastq.gz -h /home/siebrenf/tdewijs/results/qc/trimming/GSM1481263.fastp.html -j /home/siebrenf/tdewijs/results/qc/trimming/GSM1481263.fastp.json