DeduplicatedCluster bam files were obtained from our colaborators trackhub and content were made similar to seq2science v0.7.1 - bigwigs were generated with Deeptools bamcoverage - peak bigbed files were generated by - running gimmemotif's coverage_table using peak regions and bam files - filtering the coverage table per cluster - filtering the cluster to regions with nonzero values - converting the output to BED5 - using bedToBigBed on the BED files - rna data was made by running GSE82280 in seq2science - then merging the bigwigs with bigWigMerge - then converting the output bedGraph to bigwig with bedGraphToBigWig